Os07g0545500
| Gene Name |
Os07g0545500 |
|---|---|
| Description |
Similar to VMP4 protein |
| Version |
NM_001066451.1 GI:115472634 GeneID:4343520 |
| Length |
5926 bp |
| Definition |
Oryza sativa Japonica Group Os07g0545500, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 7:22254956..22260881 |
| Sequence Coding Region |
22255038..22255880,22256163..22256398,22256914..22257110,22257196..22257910,22257987..22258629 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008400:22254956..22260881 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008400:22254956..22260881 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgatgaggcattgtaggagagaatggctcctcgccctgtgcctcatctctgtgcagctcctcattccaacaggctgcgagggggttctcgtcgcggcaagcaacatgtcgccacctgctttgacaccactcctcatcaatcaagtagaccaattggtagaacatgcatgggtcaagtgtggattggacaagagaactcttgaagatgttagacgccacttcaactacaaccatgtattggcaattctccgtagaatgtctgggcaagacattaaggacacctctcctgacattgatggagggaccagtgtattatcactagaaaggagggacgctatactgaactgtttaagcaagcagaatttcatgagtatcgctggacaggatggtttaaaaatcttgtccgctgattatatcaaagcacttattgcctcacttagaacagaccttgctcaggaatcttcaactacaaagtcaatacctgaacaagcaggaaaacctgtcccagggaaaacttctacaccaaaacctgtaaacaaaccaaccgacagtgtatcatctccaccagatcgttcatataaatcagctcctacagaaaaggaaaaccctcctactaaatcagtagcggaaaagaaaaaggacagcagtggcatgccaaatgctttcattggtttgtccattgctggcatagctcttatggctcatctctgtttgtgctgcttcatgtgccatgggacttcctcatctgacttgagggatgataaaccacttctgactctaaatccgagcaacttgtccgctgcttctaaatcgtcccaaggaaatccaattgatgtcaataagcttggggtagtgtcgttgaaatcagaggctggtcaaaatggagatgtgaaactaatttcgaaggaaggcacaaacaatgtgaatgtggtgcacccagtgagttctgtgtcagaatcaacattgatgccacctccggaaggcgcaaacaacgtgaatatggtgcacccggaaggcgcaaacaacatgaatgtggtgcacccggaaggcgcaaacaacgtgaatatggtgcacccggaaggcgcaaacaacgtgaatgtgaatatggtgcacccagtgggttctctgtcagaatcaacaccgatgcagcctcctgtgatgccacctccaattccgaagcttctttctccaccagcaccccaagctcccatgccaccattaaaggcttctcctgttcctcccccagaaccttcaccacctcctgctccaaaagctgcacctccaccgccaccaccaaaatctactggccctggcccacctcgcccgccaccgccagccatgcctggttcttcgaaaacacgcccaccgccacctcttaagccaggcgctaaggtgggtgctgttgaaaattctaatgaagctaaaacaaagctcaaaccattcttttgggataaagtaactgccaatcctgcacgatcgatggtgtgggaccaccttaaatcaggatcattccagtttaatgagcagttgatggaaaacctttttggttataattcaactgacaagagcagtgacaccaagaaagatttatcatcgaaagatgccactcaactcataaggatacttgaccccaaaaaggcgcagaacctagctatatcattgagggcgcttggtgtttcacctcaggaagtatgtagtgcagttaaggaaggaagtgaacttccatctgatttgatacagaccttaataagatggtccccaagtaatgatgaggagctcaggcttcgattatacagtggggaactctttcaacttggtcctgcagagcaattcttaagagtaatcatagatattccttatattttccagcgcttagatgcattgcttttcatggccaatttaccagaagaagcttcaaatgtgaagcaatcctttgccactttggaggtggcttgccaggagcttagaaacagccgtctttttatgaagttactagaagctgtcctcaaaaccggaaatcggatgaatgttggcactttccgtggtggagctcaggcttttagactcgacacgctcctcaagttgtctgatgtcaaaggaactgacggaaagacaacactattgcattttgttgttcaggaaatcattcgttccgaaggtgtccgtgctgaacgggctgcaaaggagcagaacagtggcgtttccagtgtgaagactgatgatctaggtgacaaaagtgagcaaactgaagacggttacaaacaactggggctgaaagttatctccagcttaggagatgaacttcaagatgttagaaaggcagctatcctagacgcggatcaattgactatgtcggtagcaagtcttggccacaagctcatgaaaaccaatgaattcttgaacatggacatgaaaagtttggacgaagacagtgggtttcaccgcaagcttacgcacttcgtacagcagtctcagactgatattactttcttgctggaggaagagaagaaaatgcggttattggttaaagacaccgtcgactatttccatggaagtgcaggaaaggatgagggcctccggttatttgtgatagtaagagatttccttgcaatgctggacaaggtgtgcaaggaggtgaaggaagcatcaaaagttgctccagtaaaagcaaaagccaaacagccctcccaatcattgcagtcattccgtgatccacgggttaatctttttccggcgattcaacacctgagggcagatagctctagctcaagttctgatgatgaaagttag</cdnaseq> |
| Protein Sequence |
<aaseq>MMRHCRREWLLALCLISVQLLIPTGCEGVLVAASNMSPPALTPL LINQVDQLVEHAWVKCGLDKRTLEDVRRHFNYNHVLAILRRMSGQDIKDTSPDIDGGT SVLSLERRDAILNCLSKQNFMSIAGQDGLKILSADYIKALIASLRTDLAQESSTTKSI PEQAGKPVPGKTSTPKPVNKPTDSVSSPPDRSYKSAPTEKENPPTKSVAEKKKDSSGM PNAFIGLSIAGIALMAHLCLCCFMCHGTSSSDLRDDKPLLTLNPSNLSAASKSSQGNP IDVNKLGVVSLKSEAGQNGDVKLISKEGTNNVNVVHPVSSVSESTLMPPPEGANNVNM VHPEGANNMNVVHPEGANNVNMVHPEGANNVNVNMVHPVGSLSESTPMQPPVMPPPIP KLLSPPAPQAPMPPLKASPVPPPEPSPPPAPKAAPPPPPPKSTGPGPPRPPPPAMPGS SKTRPPPPLKPGAKVGAVENSNEAKTKLKPFFWDKVTANPARSMVWDHLKSGSFQFNE QLMENLFGYNSTDKSSDTKKDLSSKDATQLIRILDPKKAQNLAISLRALGVSPQEVCS AVKEGSELPSDLIQTLIRWSPSNDEELRLRLYSGELFQLGPAEQFLRVIIDIPYIFQR LDALLFMANLPEEASNVKQSFATLEVACQELRNSRLFMKLLEAVLKTGNRMNVGTFRG GAQAFRLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGVRAERAAKEQNSGVSSVKTD DLGDKSEQTEDGYKQLGLKVISSLGDELQDVRKAAILDADQLTMSVASLGHKLMKTNE FLNMDMKSLDEDSGFHRKLTHFVQQSQTDITFLLEEEKKMRLLVKDTVDYFHGSAGKD EGLRLFVIVRDFLAMLDKVCKEVKEASKVAPVKAKAKQPSQSLQSFRDPRVNLFPAIQ HLRADSSSSSSDDES</aaseq> |
| Gene Sequence |
<dnaseqindica>5002..5844#4484..4719#3772..3968#2972..3686#2253..2895#1020..1175#gagttcactctcaccgaggccgccgccgccgccgccgagccatggaacccggggtgggggggtgggggggtggcgcagctggtacgagagggagaggtggacgacggtggcggccggccttgatccggccggtggcagcgggaaaggggggagccggggaggtggcggcgtgctagatatggaaacacttcggagatggcgatggccgtcgaggcgcgcggattcagggtgggggtggtcgagctcaccggcggcaagggactcgccgggtggtcgaggtctccgatcatccgacgcggagagttgcttgggttttctgtttctccatggttggtaaataatagcaattccatcctggaattctcctcctcccattcccgagtttccgacgagacgctttggcaatggcggtggcgccagatcacgcgcccgtattcgtggcgctgccgccgcggattccgcgggatggacatggggaggaatttcccgggcttggacttgcctgtccttctcttttcctcccttgttcttggggtggggttggcggattggggaatcggcttcgagctgattggttttgactgcgccatccgatttcttcgcttttgtggaggggggcagcacggctgtgcatttcgttctcttgtcgtggatgcccccggaatttatccccaattctcgctatacttgctcgtctacatcggtgtgtttcttggagcatttcaagcacttctcgtcttcatcgatgcatttcttggagcatttcaagtgtccagcgtctaaatcgctcaggcgaatttggaggagcctttaggcgcattccgctcaaaatcaagtggaattgttgcatgaatcttcagattgttttggctggattgccaggtttcttcgatcatttttctctacggggctgaggaatttttcgccccatgcccggaaagctccaaaggggatgtttgccacaattttcagagtatctgtgttgagatgatcggtgtggtgtagaaggaagcacgcaaatgatgaggcattgtaggagagaatggctcctcgccctgtgcctcatctctgtgcagctcctcattccaacaggctgcgagggggttctcgtcgcggcaagcaacatgtcgccacctgctttgacaccactcctcatcaatcaagtagaccaattggtaagcacatttccatatattttgatgcatacgtaagcttcaatttgtgtgaaaataccatacaagagatggcagtagcagcttttgtaaggagatgtaggcatagtcgtgtttgcattcagtttcgaaccaagaattaggaccaagtcctttccaagtggatgtgggttgcaagacattaatcgggactcgggagtatgctctcaggagcacagaagcccatggcattccctcctatacttattacggtgtgtgtcgctaggcattaaacgggaatttgctctcaagagcacagaaacacatggcattcacctcctaacggcactgatgtttttgggtaatgcaggactcagggaatcaggattgattcatgaataggtccacatttacttatttgttgtgggacatgcagagtattcttgtactcttgtagtctcgtgtttcccaaattgcatgaaagacagacgaataaggttgctgaagtctgtaggtgattcccaaaggcaaccatgattttatttgtgttgtgtcttatagttttttttttttttttttttggctttggatgacagatcacataaggttaacctttctgtgaacagagttttgaatcattttcttcttgtgttttatggctgaggtagtctgtttgtttttttagaaaatggcagcctctacatccaaaccagtctgataggtgtgcaccattgcattgattgtgatggtgttgtgatttaaacactggcttaacagaatcaaactgttaaatttggcttgcctccttctctcccctccccctcctggcctcctctctcctttaacagcaggtgctagattcctccttgttatgacatgacaaatgaagactcggagagaggaatgtgactagtagtgaatataattattttcgatccaactagtagaacctaacattttgtggcatcaatggctgtttaattcctaactggtgaatgttgccttttgttggatatgactacaaatgttgggtatatccttttttttaaaagaaaaaacattcgtactgattagagtgactgttaattacatttcatacaggtagaacatgcatgggtcaagtgtggattggacaagagaactcttgaagatgttagacgccacttcaactacaaccatgtattggcaattctccgtagaatgtctgggcaagacattaaggacacctctcctgacattgatggagggaccagtgtattatcactagaaaggagggacgctatactgaactgtttaagcaagcagaatttcatgagtatcgctggacaggatggtttaaaaatcttgtccgctgattatatcaaagcacttattgcctcacttagaacagaccttgctcaggaatcttcaactacaaagtcaatacctgaacaagcaggaaaacctgtcccagggaaaacttctacaccaaaacctgtaaacaaaccaaccgacagtgtatcatctccaccagatcgttcatataaatcagctcctacagaaaaggaaaaccctcctactaaatcagtagcggaaaagaaaaaggacagcagtggcatgccaaatgctttcattggtttgtccattgctggcatagctcttatggctcatctctgtttgtgctgcttcatgtgccatgggacttcctcatctgacttgagggatgataaaccacttctgactctaaatccgagcaacttgtccggtataaaatcgcccactctgctgcaagataatgtaataatttcatctagtggtggtatttactctctcttttgcagctgcttctaaatcgtcccaaggaaatccaattgatgtcaataagcttggggtagtgtcgttgaaatcagaggctggtcaaaatggagatgtgaaactaatttcgaaggaaggcacaaacaatgtgaatgtggtgcacccagtgagttctgtgtcagaatcaacattgatgccacctccggaaggcgcaaacaacgtgaatatggtgcacccggaaggcgcaaacaacatgaatgtggtgcacccggaaggcgcaaacaacgtgaatatggtgcacccggaaggcgcaaacaacgtgaatgtgaatatggtgcacccagtgggttctctgtcagaatcaacaccgatgcagcctcctgtgatgccacctccaattccgaagcttctttctccaccagcaccccaagctcccatgccaccattaaaggcttctcctgttcctcccccagaaccttcaccacctcctgctccaaaagctgcacctccaccgccaccaccaaaatctactggccctggcccacctcgcccgccaccgccagccatgcctggttcttcgaaaacacgcccaccgccacctcttaagccaggcgctaaggtgggtgctgttgaaaattctaatgaagctaaaacaaagctcaaaccattcttttgggataaagtaactgccaatcctgcacgatcgatggtgtgggaccaccttaaatcaggatcattccagtaagtcttcagattaaattgaagctgtgcctgaacttactattgcaagaacacactagtttaaagtatctgaactgtttcacaggtttaatgagcagttgatggaaaacctttttggttataattcaactgacaagagcagtgacaccaagaaagatttatcatcgaaagatgccactcaactcataaggatacttgaccccaaaaaggcgcagaacctagctatatcattgagggcgcttggtgtttcacctcaggaagtatgtagtgcagttaaggaaggtaaagttcatcctgtatggaactcgtcttttttattcttagcacacactcacagtgctttctagcttcatatttatcatacatacagtatctttgtaaaagttggagaactcagctatgatggaatgctgatgctctgaattattatcagacttctagtttactttgcttgcaataatgtatatggcatacattgtagatatgtgcctatttcaatttagttttcaaagtgacgagatgagggttgctctcttctgagctaagggtgacaagattaactttttttcaccaaagcgaattgtgcaaaagatatgataagtgaaatgattcatttcatctacttcaaccgctactattgagaaatgatttacaggattatactgcaaatagatgcatgttactagccattagaagttagattggtttctggtatacacaaatagtgcctccaaccattttgtttcaagaatttgatgttggatttcaccttaaccatttttcttgccaatttgtaggaagtgaacttccatctgatttgatacagaccttaataagatggtccccaagtaatgatgaggagctcaggcttcgattatacagtggggaactctttcaacttggtcctgcagagcaattcttaagagtaatcatagatattccttatattttccagcgcttagatgcattgcttttcatggccaatttaccagaagaagcttcaaatgtgaagcaatcctttgccactttggaggtaatgaaagattcattgtgaactctcaacttctagattatctcacattgttgtgccagttttgttcagttggcgatgtctagtattctattgatctaacatttccatgaagggttatatccaagtagttagttctgttacaataaatgcacttttactgcacagtttatgcctagcgatcggattcttaaaatatgagcctctgatcagttatgcttttaatgaattttgttccatattgattactattcttatctctgttggcatttcaatcccaatcaggtggcttgccaggagcttagaaacagccgtctttttatgaagttactagaagctgtcctcaaaaccggaaatcggatgaatgttggcactttccgtggtggagctcaggcttttagactcgacacgctcctcaagttgtctgatgtcaaaggaactgacggaaagacaacactattgcattttgttgttcaggaaatcattcgttccgaaggtgtccgtgctgaacgggctgcaaaggagcagaacagtggcgtttccagtgtgaagactgatgatctaggtgacaaaagtgagcaaactgaagacggttacaaacaactggggctgaaagttatctccagcttaggagatgaacttcaagatgttagaaaggcagctatcctagacgcggatcaattgactatgtcggtagcaagtcttggccacaagctcatgaaaaccaatgaattcttgaacatggacatgaaaagtttggacgaagacagtgggtttcaccgcaagcttacgcacttcgtacagcagtctcagactgatattactttcttgctggaggaagagaagaaaatgcggttattggttaaagacaccgtcgactatttccatggaagtgcaggaaaggatgagggcctccggttatttgtgatagtaagagatttccttgcaatgctggacaaggtgtgcaaggaggtgaaggaagcatcaaaagttgctccagtaaaagcaaaagccaaacagccctcccaatcattgcagtcattccgtgatccacgggttaatctttttccggcgattcaacacctgagggcagatagctctagctcaagttctgatgatgaaagttagatcaacatacctatgttttaccgtgcacactcagtgagaaaaattcatcaggaaatgataacgccaaaacaggttaaaactg</dnaseqindica> 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| External Link(s) |
