Os07g0545800

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Revision as of 08:40, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0545800| Description = Similar to Chitin-inducible gibberellin-responsive protein| Version = NM_001066452.1 GI:115472636 GeneID:4343521| Le...")
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Gene Name

Os07g0545800

Description

Similar to Chitin-inducible gibberellin-responsive protein

Version

NM_001066452.1 GI:115472636 GeneID:4343521

Length

4703 bp

Definition

Oryza sativa Japonica Group Os07g0545800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:22275134..22279836

Sequence Coding Region

22277821..22279536

Expression

GEO Profiles:Os07g0545800

Genome Context

<gbrowseImage1> name=NC_008400:22275134..22279836 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:22275134..22279836 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacttgcaccagttattaaagtacagattgactggcgctaacgttgtgtacgaaattcctacagagaacaacttgcaaaactctccctggcaagctaacccactgaagtacgagttcagcgattccccatacacccctctctcttcccaatttgagtgtgacaatttgtctgctcttaccaacactccagataaccagagctctacagaaaccatttcagcccaaccaatctccccattggaagcagacagctcatatagacaggcgggtattcttctccaggagaacattcaagtgggagctgatccgttgtatgctacatcaagacataatatgcaacacgccttacgggagattgagactgttctgatggcacctgatacagatgatgcaacaactagcaccaagcatgagtttgaggaaatcaagcctgctcagcttgtgaggcagcggtcgagaacatggagtcatgaatcacggcagccgttacctggagttggtcggtcacagtttgcatctggtggataccccacagcaagctatgaatttcgtccagagaaacggcaaagggagttaagggaagaccctcagataattgtgaagcagctattaaccaggtgtgctgaggctctgagtgaggacaggacagaggagttccataagcttgttcaggaggctcgtggagtggtctcaatcaacggggaaccaatccaacgtctaggtgcttacctactggagggtttggttgctagacatggaaactctggcacaaacatctaccgtgctctgaagtgccgtgagccagagagcaaggagctcctgtcctacatgagaattctatacaatatctgcccttacttcaagtttggctatatggcagccaatggggcgattgcagaagcattgagaactgagaacaatatccacataattgattttcagattgctcaagggactcaatggatcacactgatacaagcattagctgcaaggcctggtggtcctcctcgtgtgcggatcaccgggatagatgacccagtgtcagagtatgctcgtggtgaaggtcttgacattgtggggaaaatgttgaaaagcatgtctgaagaattcaaaatacctctggagtttacgcctctgtctgtctatgccacacaagtcacgaaagagatgcttgagatcaggccaggtgaagcactgtctgtaaacttcacactccagctacaccacaccccggacgagagcgtggatgtcaacaacccacgcgatggtctgctccggatggtgaaagggctgtccccgaaggtgactactttggtagagcaggagtcacacaccaacacaacgcctttcttgatgaggtttggggagaccatggagtactactccgccatgttcgagtcgatcgacgccaacctgccgcgggacaacaaggagaggatcagcgtggagcagcactgcctcgccaaggacatcgtcaacatcatcgcctgcgaggggaaggacagggtggagaggcatgagctgcttggcaagtggaagtcgaggctgaccatggccggcttcaggccttacccgttgagctcgtacgtcaactcggtgataaggaagcttctcgcctgctactccgataaatacacattggatgagaaggacggcgcgatgcttctcggctggaggagcagaaagctgatatctgcttctgcgtggcactga</cdnaseq>

Protein Sequence

<aaseq>MDLHQLLKYRLTGANVVYEIPTENNLQNSPWQANPLKYEFSDSP YTPLSSQFECDNLSALTNTPDNQSSTETISAQPISPLEADSSYRQAGILLQENIQVGA DPLYATSRHNMQHALREIETVLMAPDTDDATTSTKHEFEEIKPAQLVRQRSRTWSHES RQPLPGVGRSQFASGGYPTASYEFRPEKRQRELREDPQIIVKQLLTRCAEALSEDRTE EFHKLVQEARGVVSINGEPIQRLGAYLLEGLVARHGNSGTNIYRALKCREPESKELLS YMRILYNICPYFKFGYMAANGAIAEALRTENNIHIIDFQIAQGTQWITLIQALAARPG GPPRVRITGIDDPVSEYARGEGLDIVGKMLKSMSEEFKIPLEFTPLSVYATQVTKEML EIRPGEALSVNFTLQLHHTPDESVDVNNPRDGLLRMVKGLSPKVTTLVEQESHTNTTP FLMRFGETMEYYSAMFESIDANLPRDNKERISVEQHCLAKDIVNIIACEGKDRVERHE LLGKWKSRLTMAGFRPYPLSSYVNSVIRKLLACYSDKYTLDEKDGAMLLGWRSRKLIS ASAWH</aaseq>

Gene Sequence

<dnaseqindica>2688..4403#atcgcagcacacgaaaagagaaccagagagagagagagagagagagagagagagagaggagtggaagtggatcggggcatcgctgcggcgtcggggctgtgcagatcggaggaggtgagagctctcgtcctcgtaccatccatctcatcggattccgtgctgccgtggttgctaattttggcttggtttgtcgaattctttttgggctttttttggggtgctttttttggttggtattacccggggtttgcttcttgagggtgaaggcggcgtctccgagcggtttccggtggaagtctagtggtttttcggcgaggagatgggtttcagttgggtgagctaggtttattggacgaatttgttggggatttctgttggtttgagccgattcgatcgcgtccgagagcattttgctgttggggacgagagggcgcctccattttcgggattactgagtttatcctgtgcaaattttgcaaaaaaaattctactaattttggtccgtttcataggtgaatcgtcgcttattgagtggttcgttaggttagctcttaactgcgccgcttgcatttgttgccggaatttattattatctactccacgggtaactcgagggcgtgaagtgaaagctaattatgtcgcccaaagttactgatccctttttttttttgttgaaactgagctagcttaatttgcctctgttggcttgtggagacatgatgcagtacaaccaagtagcagcaacagtttttgccctgtgaaacactggaaccatgatcccccttttttgtgtgtgtttgattaggacataacttacaaaattctatgtttcacctgattagtcaattggcttacctctcctcccgatgacaaatccatcaaagaaattttcttgctggggggtaaagtgccactggagaagaacaaatcgaggttgttctgtgacttggttgtgtagttttatatagtttttagcattgtcaaccaggctccaggatcccagaaatttcactcctttgcttactgcatagactatacaagttgccctcttgtttgagcgatgaaggcgacgttgattccacacggttgattggtcaaacctcttgttggcggaggtaccttcttcagaattcagaggggtgatagaccaatagtcaaacaactaggttggtcaatgatcaatcgtcttcatccaactagagaatcttatagcctgcttgtgagtagtcctaattgtgtattttggaaggatcaaagaacagtccacgtcaattgtcttcaaccaactagagaatgtttgagtctgcttatcttaattgcaagggaagtcgatgaatattttgatgggggatgtataactttttttccttatcttttctcctgttgtttgctctccaaacctcattgttaggctggttctcctcggtagtacttagaatagcttcatttctccagagcttgttgtcctctagttgtatgctatgtggctgagcttgacattctggctagattaattggagttatgtgggagtgattgggatatttcatagataatgttcttcttttggagttgcgagcacacggtatgtgatgcaatgatggacttaagtaagagaatcgctatcagtttgtcttgatctatgttaaataagattagaatgaagatctaatactctttagtctttaacagaatagtataacatggtagtgtgtaagatcataacgtgatgggattctagtcaattggcatgttgactctggaaggcgaactcttgtcatgttggttgtttgcaatctttcttcctatatgatggtacatgctggaaattttggatcttaagctttgacccactcatgaattcatgattgacgatcacttcttttggccgaaatgttcgattttgacttctgtggttctcctttaagcttgaggaaagaaggatagagtgatgacggggacaccttgacagagaaacattgcggtttatgcataactctagagagctactttacaaattgtgctctatttatagatgaatgccaagcagaaaattcactaaattgttttaagtttgttttgataaaataaaaaaaagtgctcgagtcatgaatgtttaattttggtatttaagaaatcacggatgctgttgccgagaattctttttaccttgttagcattaatttcatcatgatctgaagtagctctagcttaatttggtattctttgttagctaagacatgatatttcctcttttggtgcatatgcaaattcctatcttttccccctaaaatctgcaaatgtttaatcagatttttatatgccatctcaattaacatttatatactgttatggattcatctgggtaaacttttttagtcttatctcagtctggttgattcatcttgttccacatgtgacatgtcttgataatgtagtgacagacaagccatttatgctaatttcatacatcctcatgataaccgggctgcgtttgtgtgcaatgttggctgtctgtttgatgtgcttttctttctttctatgatttatatgtttgtaatttgcactgatagagcaaaatgttctgttctgcttgtttgtttttaccacctcccatggaataaatggtttatagtttccttcttttgctatgtacaggtcatgaacgactaatctccgttcatttattatggacttgcaccagttattaaagtacagattgactggcgctaacgttgtgtacgaaattcctacagagaacaacttgcaaaactctccctggcaagctaacccactgaagtacgagttcagcgattccccatacacccctctctcttcccaatttgagtgtgacaatttgtctgctcttaccaacactccagataaccagagctctacagaaaccatttcagcccaaccaatctccccattggaagcagacagctcatatagacaggcgggtattcttctccaggagaacattcaagtgggagctgatccgttgtatgctacatcaagacataatatgcaacacgccttacgggagattgagactgttctgatggcacctgatacagatgatgcaacaactagcaccaagcatgagtttgaggaaatcaagcctgctcagcttgtgaggcagcggtcgagaacatggagtcatgaatcacggcagccgttacctggagttggtcggtcacagtttgcatctggtggataccccacagcaagctatgaatttcgtccagagaaacggcaaagggagttaagggaagaccctcagataattgtgaagcagctattaaccaggtgtgctgaggctctgagtgaggacaggacagaggagttccataagcttgttcaggaggctcgtggagtggtctcaatcaacggggaaccaatccaacgtctaggtgcttacctactggagggtttggttgctagacatggaaactctggcacaaacatctaccgtgctctgaagtgccgtgagccagagagcaaggagctcctgtcctacatgagaattctatacaatatctgcccttacttcaagtttggctatatggcagccaatggggcgattgcagaagcattgagaactgagaacaatatccacataattgattttcagattgctcaagggactcaatggatcacactgatacaagcattagctgcaaggcctggtggtcctcctcgtgtgcggatcaccgggatagatgacccagtgtcagagtatgctcgtggtgaaggtcttgacattgtggggaaaatgttgaaaagcatgtctgaagaattcaaaatacctctggagtttacgcctctgtctgtctatgccacacaagtcacgaaagagatgcttgagatcaggccaggtgaagcactgtctgtaaacttcacactccagctacaccacaccccggacgagagcgtggatgtcaacaacccacgcgatggtctgctccggatggtgaaagggctgtccccgaaggtgactactttggtagagcaggagtcacacaccaacacaacgcctttcttgatgaggtttggggagaccatggagtactactccgccatgttcgagtcgatcgacgccaacctgccgcgggacaacaaggagaggatcagcgtggagcagcactgcctcgccaaggacatcgtcaacatcatcgcctgcgaggggaaggacagggtggagaggcatgagctgcttggcaagtggaagtcgaggctgaccatggccggcttcaggccttacccgttgagctcgtacgtcaactcggtgataaggaagcttctcgcctgctactccgataaatacacattggatgagaaggacggcgcgatgcttctcggctggaggagcagaaagctgatatctgcttctgcgtggcactgacagtagtatgttgagaagaagaaatgatagagagcatatatatacataccgattccctggtccaatttacagaatgataccctttgatgtaccctcagtttgattgacagcgggtgttgccttcatttatagaccaggatcaaacattgacattagatttgtagagaagttgtatgataataattttctttgcgattcaatgtatgatgtatccatggctgccatagttaataatattcttgcatagtcatattgatcggctaatcacccgtggattagcgttgtgtctgtcttgacaat</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0545800, RefSeq:Os07g0545800