BGIOSGA013917

From RiceWiki
Revision as of 15:53, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA013917

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013917, complete gene.

LocusTag

OS03G0843200

Ensembl Transcript ID

BGIOSGA013917-TA

Ensembl Protein ID

BGIOSGA013917-PA

Length

3693

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:39817556..39821248

Sequence Coding Region

39817556..39817657,39818083..39818154,39818384..39818443,39818604..39818763,39819115..39819184
,39819285..39819339,39819827..39819910,39820374..39820412,39820917..39820963
,39821137..39821248

Genome Context

<gbrowseImage1> name=IndicaChromosome03:39817556..39821248 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:39817556..39821248 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGGGCTCGGCCGCGTACTCCGCGGCGTCGGCCATCGTCGTGGTGATGGCCAAGGGCAAGGGGCGGGGCGGCAGAGGCGGCCCCTCTGGCGCCAACAAGGTTTCTGAGCGACGGCCTCCTAGGATAACTTCCAATGTGAAGCAGAGCTTGAGGATTCTAAAATTTTGGAAGGATTATGAAAGGAGGCAAACAAGTGGACCTCAGCCTGCTACTCGGTACCGCAAAAAGAAACACAAATCAGGGTTTGGAAATGCTTCCCCGGTTATTCTTGTGGACGGTTATAATGTATGTGGCTACTGGGGAAAGCTTAAGAAGGACTTCATGAATGGAAGGCAAGAGATTGCAAGACAAATGCTCATTGATGAGCTAGTATCTTTCAGTGCAGTAAGAGAGATAAAGGTTGTAGTAGTATTTGATGCTGCAGCCTCTGGGCTTTCTACACACAAAGAAACCTATAAAGGGGTTGATGTGGTATATTCTGGTGACTTGTCTGCTGATTCTTGGATTGAGAAGGAGGTTGAAGCTTTGGTGGCAGATGGATGCCCGAAAGTCTGGGTTGTAACATCTGATGCATTGGAGCAACAATTGGCACATGGAGAAGGTGCTCTTATTTGGAGCTCTAAAAGATTGGTCAAAGAGATAAAAGAATCAGAAAAGGAGCTTGATGAAGAGCTGAAGGAAACCAGATCAACATCGTTGCAAGGGAAGCTTTTTCAGCACAAGCTGAAACCTAAAGTAGTGCATGCATTGAAAGATCTCCGGAATAAGCTTGAAGAAGAAGAGCGGAGAAAGAGGTGA</cdnaseq>

Protein Sequence

<aaseq>MVGSAAYSAASAIVVVMAKGKGRGGRGGPSGANKVSERRPPRITSNVKQSLRILKFWKDYERRQTSGPQPATRYRKKKHKSGFGNASPVILVDGYNVCGYWGKLKKDFMNGRQEIARQMLIDELVSFSAVREIKVVVVFDAAASGLSTHKETYKGVDVVYSGDLSADSWIEKEVEALVADGCPKVWVVTSDALEQQLAHGEGALIWSSKRLVKEIKESEKELDEELKETRSTSLQGKLFQHKLKPKVVHALKDLRNKLEEEERRKR</aaseq>

Gene Sequence

<dnaseqindica>1..102#528..599#829..888#1049..1208#1560..1629#1730..1784#2272..2355#2819..2857#3362..3408#3582..3693#ATGGTGGGCTCGGCCGCGTACTCCGCGGCGTCGGCCATCGTCGTGGTGATGGCCAAGGGCAAGGGGCGGGGCGGCAGAGGCGGCCCCTCTGGCGCCAACAAGGTCAGCTCATTCCTCCTCCCCTCAGGTACCAACAGTTTGGGTAATGGGTACAGTATGATCGAATTCAGCGCGGGGAGTTTGGATTGAACTGAATGTGCCTGTGAATGAACATTGCTGCAAGGGATTAGAGGAATTATCAGTTACGAATCATTGCTTCACAAAATTCTGGGGCACCCACATGGAAGGGGAAAAACGGCTGCTGTGCGTGCTCAACCATGCAAAAAAAAAAGAGTTATTCATGAGGATTGAGTTATGTTTTTTTTGTTGTTGTATTAATCAGAACATTTAGTGTGGTACATTCTCAATTTAATAGCACATTTGTTGGATTATCAACAAATGGAAGATCTTGTATTGGACCCATGGGTAACAGGTCGGCTTTATGGCTTTGCGTCCTCACACATGACACGCTGCCTATTTATGTGTAGGTTTCTGAGCGACGGCCTCCTAGGATAACTTCCAATGTGAAGCAGAGCTTGAGGATTCTAAAATTTTGGAAGGTGCAAGCTTTGTTGCATTACCTTTTCTCTCATGCTAAAATCTGTGATCTACTCTGCTGCACTTTGTATAAAGTCGTAGAACAGCATGTACCGAATTCATCAGGTGGGTATGGCCAAACAGGGGCACCCGAAGCATCCAAGATTAATCTTAGTTCTAACAGTTATTTACCCTTGTGTGTGCCTTTTGTATTCTTAAGCTTAGTTCTAACAGTTATGCCCTTGTCATCAGGATTATGAAAGGAGGCAAACAAGTGGACCTCAGCCTGCTACTCGGTACCGCAAAAAGAAAGTAATAAAAGAAGTGCTTCCTGATGACACAGACTTCTACGAGGATGCTTCTTCCACTCTTCACTAGTCAGGCTTGCCTCTCATTGCATTATCAGGACCTCACTACATTTTTTGATTGGTGGTTCAATGAAATGCTGACATTGTTTTGTCAATTAATCTAGCACAAATCAGGGTTTGGAAATGCTTCCCCGGTTATTCTTGTGGACGGTTATAATGTATGTGGCTACTGGGGAAAGCTTAAGAAGGACTTCATGAATGGAAGGCAAGAGATTGCAAGACAAATGCTCATTGATGAGCTAGTATCTTTCAGTGCAGTAAGAGGTTTGTTTGTAGTAGGAAATTAGATCCGTTACGTATGGTCTCAAGCATGATTTCCTTAAAACTCACTTATGCTGTTTACTTAAGCTGTAGCTGTTGAAGCTGATAGATGTTAGTATACTCTGATTAGATGTTAGGTACTTCTTATCTCTATTAGAGCAAACACCAGTTCAATAGTGGCTTATAGTGAAAAAGGTAGTCATGGCTTACAAATGTATCATCTTGCCAAGTGGGGAGCATAAGTAGATGATGATTTGTTTTTATCTGCCGGTGGTGCGTAATTTCTTCTCAATAGCTATCTGATGTTCTCCCATTCCAGCATTCTTATATCATTTGTCATTGTCATGCTTGCAGAGATAAAGGTTGTAGTAGTATTTGATGCTGCAGCCTCTGGGCTTTCTACACACAAAGAAACCTATAAAGGGTGAGATAATATTGTGAGCTGATATATCTGTGGGAATTGTTACTTCAAGCAGTTTAGCCTGTAGCGAAACTTAACAAATAGATTTTACTTCATGGAATAGGGTTGATGTGGTATATTCTGGTGACTTGTCTGCTGATTCTTGGATTGAGAAGGAGGTAATGCTGATAAATTCTTATTCAGAACAAAGGATACCCCTAGTTGACCAGACATGTGCATTTACCGCAGTGCAAAATTCACACGTAGATTTAAATTAAGCAACAAAAGCATTGATTTATGAAGCATGCATAACTGGATGTCTTTATGCCAGAAAATAGTTGGGTCCGTTTCACCAGCAGTAAGGCTCCAGTGGTGGGCCTTATACTAGTTATATTTTTATACCAACCGTTCAAATACCTGGTGCTTATGCAAAAGAAGATCGGTAGAGCAAGCATAATTTATTCAAGGGTTGTACACTAATACTGATCTCAAGTGATGCACTCTTGGCTCTTACCTGCTGTATTTTCATCCATGGGCATTAATTTCTCATATTAACATGGTAACACTAAATTTCCGCGCCTGTGACATTTGAATTTTGAAGCAATGAGCTTCAAATTTCTGTATGAAAGCAAGATGTTTCTTTCTCTGATTCTTTGACCAACACAGGTTGAAGCTTTGGTGGCAGATGGATGCCCGAAAGTCTGGGTTGTAACATCTGATGCATTGGAGCAACAATTGGCACATGGAGAAGTATGTTGTCACCCTTTTGGGGATTAGCTGCTTCTATCATATCTGCCTGCCGTTAGACATTTTTGACCGGTTTATGGTTTAGAACTTTTATCTTTTTGTCATGTTCTGCAACATATTCTGAACTCACAGTAGCAGAAAACACATTTTGTATCCTATGCATTTAATCACCAAAATTTCCCAACGGGGGTCCGAAAAACACAAGTACTGGATGTTATATGTCCAAACTGAATATTTCCTTCAAAAGAGTTAAGGCAGGAAAGATAATTGATAATTGATATCTTGACATTTCCTTCAAAAGAGTTAAGGCAGGAAAGATAATTGATATCTTCAAAAGAGGAATGTATCAAACATGCATAATGTGAATCTCAGAAGTGAAACTTATATCTCCTATAGGATTTTGCTTTGTGGTTTTATCATCAAATGTTTTATTCTTGATGGTTAAAAGGTTGTTCCCACTGTGTAGGGTGCTCTTATTTGGAGCTCTAAAAGATTGGTCAAAGAGGTTAGTTCTTAATCTTTTTTATCCTGCACACATTACTTGCTCAAATAGATGCTCTTCACTTGAATATCTGATTACATGCATTGTGCTGGTATAGCATCCTTATTTTTGGACCAAATGTCTTGTTGTAACTATGGTACAAAATGTTTTATATTGTTTAAGCCATGCTGAGTAATCAACAAGATACAGATGGCTGACCTAGGACTTTCACCACCAGCCTGAGGCCTGGGACTAAAAGTCCAATGCGTTGCATTTTTTTCACTGTGATGCTCTAAATGTGACCCAATACATGCTGGGCTGCCCAGGGCTTGACGCCAAGTTGGGTCTGCCTGAGTAGGCTTGAATCTCCAATTCAAACAGACATACTGTAAATACGCTATTGAAAATTAAGCATAAGCTGAAAACATTACTTTGCAAAACTATGAAGTTTCTGATAAAACACGGGAACTCTATTGTTGCATATGGAGATTGCTTGACAACAAATTATTTCATCTTGTGGTTCTGCAGATAAAAGAATCAGAAAAGGAGCTTGATGAAGAGCTGAAGGAAACCAGGTTCAGAGTTCAAACTTTCCTACTTATTTTTTTTCTCTCTAATGTGTTTATTTGAGCATCGCACTGAAAGTATTCTCCTCGAGCTGCAACAGAAGAAAAGAATGATGCCACCAAATTATTTAAAAGAGAAGAAAATGCTAAACCTGTTTATATTTGGATTTCGAAATTGGCAGATCAACATCGTTGCAAGGGAAGCTTTTTCAGCACAAGCTGAAACCTAAAGTAGTGCATGCATTGAAAGATCTCCGGAATAAGCTTGAAGAAGAAGAGCGGAGAAAGAGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013917