BGIOSGA013950

From RiceWiki
Revision as of 15:53, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA013950

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013950, complete gene.

LocusTag

OS03G0850400

Ensembl Transcript ID

BGIOSGA013950-TA

Ensembl Protein ID

BGIOSGA013950-PA

Length

5303

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:40215218..40220520

Sequence Coding Region

40215218..40215604,40215707..40215789,40215874..40215914,40217353..40217507,40218225..40218374
,40218494..40218589,40218865..40218981,40219096..40219215,40219297..40219389
,40219479..40219595,40219941..40220057,40220214..40220276,40220359..40220520

Genome Context

<gbrowseImage1> name=IndicaChromosome03:40215218..40220520 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:40215218..40220520 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGTGGCGCTCCGGTTCGCGGCGGCCGTCGCGCGGGACTCGCCGGCGGCCGCCGCTCCCCCCAGGGTGGGGAGGGGGGAGCAGCAGTATCTCGCGTGCGCGGCGGCGGCGAGGCCGGGAGGGAGGTGTTCGAGGAGGAGGGGATTGGTGGCGCGGTGCCAGAGCGGGGCGGCGGCGGTTGTCCTCAACAAGGACGACGCGGCGTCTGTGGCCGCCGTCGCATCCTCCGCGACGGGGTTCACCGTCGCCATGAAGTTCGGCGGGTCGTCGGTGGCGTCGGCGGAGCGGATGCGGGAGGTGGCCGATCTCATACTCAGCTTCCCCGAGGAGACTCCCGTTGTTGTTCTCTCCGCCATGGGGAAGACCACCAATAACCTCCTCCTGGCCGGAGAGAAGGCTGTCAGCTGCGGCGCCCCGAAGGCGTCTGAAATTCCCGAGCTCGCAGTTATCAAGGAGCTCCATGTTAGGACGATCGATGAGCTTGGATTAGATAGATCGATTGTTTCAGGTTTATTGGAAGAGTTGGAACAACTTCTTAAGGGTGTTGCTATGATGAAAGAACTAACTCCTAGGACACGGGATTACCTTGTTTCCTTCGGTGAATGCATGTCTACAAGAATATTTGCTGCATATTTGAATAAACTTGGGAAAAAGGCTCGGCAGTATGATGCGTTTGATATTGGCTTTATAACTACTGATGATTTCACAAATGCGGACATTCTTGAAGCAACATATCCTGCTGTTGCAAAGAGGTTACAGGGTGATTGGATTGATGACCCTGCTATTCCTATAGTTACTGGTTTCCTTGGAAAAGGATGGAAATCATGTGCTGTCACCACTTTAGGCAGAGGTGGCAGCGACTTGACTGCTACCACTATTGGCAAAGCGTTGGGATTAAGAGAGATCCAGGTATGGAAGGATGTAGATGGTGTGTTGACATGTGATCCTAATATTTGTGCAAACGCTATACCTGTACCCTACTTGACTTTTGAGGAGGCAGCTGAACTTGCCTACTTTGGTGCACAGGTTTTGCATCCCCAATCAATGAGACCAGCCAAAGAAGGTGGTATACCAGTTAGAGTTAAGAATTCATATAACCGTCGAGCACCTGGTACTGTCATTACTAAAACAAGAGATCTGAGCAAGAGTATATTAACCAGCATTGTATTGAAGTCAAACATTACTATGCTGGATATAGTGAGCACAAGGATGCTTGGCCAGTATGGTTTTCTGGCGAAGGTTTTCTCAATATTTGAAGATTTAGGTATCTCTGTTGATTGTGTGGCTACCAGTGAAGTCAGTATATCATTGACACTAGATCCATCAAAACTATGGTGTCGTGAATTGATCCAGCAGGAACTTGATCATGTAGTTGAAGAACTTGAAAAAATTGCAGTTGTTCATCTACTGCAGCACAGGTCTATCATCTCACTGATAGGGAATGTACAGAGATCGTCATTGATTCTTGAGAAGGCTTTCAATGTTCTACGAAGAAATGGCGTTAACGTCCAGATGATCTCACAAGGGGCATCCAAGGTGAATATTTCATTGGTGGTCCATGATAGCGAGGCGAAACAGTGTATACAGGCCCTTCATTCAGCATTCTTTGAGAACGGTTTCTTGTCAGAAGTTGAGGAAGAGGATCTTCAACACAATGGCTCTCCTGTGAGCTCAAATGGTGTCATTTACGGAAACTAG</cdnaseq>

Protein Sequence

<aaseq>MAVALRFAAAVARDSPAAAAPPRVGRGEQQYLACAAAARPGGRCSRRRGLVARCQSGAAAVVLNKDDAASVAAVASSATGFTVAMKFGGSSVASAERMREVADLILSFPEETPVVVLSAMGKTTNNLLLAGEKAVSCGAPKASEIPELAVIKELHVRTIDELGLDRSIVSGLLEELEQLLKGVAMMKELTPRTRDYLVSFGECMSTRIFAAYLNKLGKKARQYDAFDIGFITTDDFTNADILEATYPAVAKRLQGDWIDDPAIPIVTGFLGKGWKSCAVTTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPNICANAIPVPYLTFEEAAELAYFGAQVLHPQSMRPAKEGGIPVRVKNSYNRRAPGTVITKTRDLSKSILTSIVLKSNITMLDIVSTRMLGQYGFLAKVFSIFEDLGISVDCVATSEVSISLTLDPSKLWCRELIQQELDHVVEELEKIAVVHLLQHRSIISLIGNVQRSSLILEKAFNVLRRNGVNVQMISQGASKVNISLVVHDSEAKQCIQALHSAFFENGFLSEVEEEDLQHNGSPVSSNGVIYGN</aaseq>

Gene Sequence

<dnaseqindica>1..387#490..572#657..697#2136..2290#3008..3157#3277..3372#3648..3764#3879..3998#4080..4172#4262..4378#4724..4840#4997..5059#5142..5303#ATGGCGGTGGCGCTCCGGTTCGCGGCGGCCGTCGCGCGGGACTCGCCGGCGGCCGCCGCTCCCCCCAGGGTGGGGAGGGGGGAGCAGCAGTATCTCGCGTGCGCGGCGGCGGCGAGGCCGGGAGGGAGGTGTTCGAGGAGGAGGGGATTGGTGGCGCGGTGCCAGAGCGGGGCGGCGGCGGTTGTCCTCAACAAGGACGACGCGGCGTCTGTGGCCGCCGTCGCATCCTCCGCGACGGGGTTCACCGTCGCCATGAAGTTCGGCGGGTCGTCGGTGGCGTCGGCGGAGCGGATGCGGGAGGTGGCCGATCTCATACTCAGCTTCCCCGAGGAGACTCCCGTTGTTGTTCTCTCCGCCATGGGGAAGACCACCAATAACCTCCTCCTGGTAACCATTTCTAGCTCTCGCTGTGATTGTGAAACTGAAATGTATGGATTTTTTTTTACCGCCATTCTGTGCTTAACTGTGAGTGGTTGATTGATTGTTCAGGCCGGAGAGAAGGCTGTCAGCTGCGGCGCCCCGAAGGCGTCTGAAATTCCCGAGCTCGCAGTTATCAAGGAGCTCCATGTTAGGTACGTTTCGTTTTTCATTTTAAGTTATTTCTGGTAGTTTCGGAGAATTCACTCCTGATCATTCATTTTTCTTGCTTTTCTCAGGACGATCGATGAGCTTGGATTAGATAGATCGATTGTTTCAGGTATGTCCAGTGCTTCTTTCACACACTGAACCCCCAAAAAAATTCACTGAAAGCTTAGTCTGTCTGAAGCTTCCCATTTTCCTTTGGTTGGCAAAAACATACACAACAAAATGTATATTCCAATCTTGTTGATGTATTGATTTCCATCTTTTGGCACATGCATAGTCGTCAAAATATTGCGATTTCACGGTCCTGGTTGTCGTAAGGTTTATAACACCTTATTGTTTTAAAGGCCATAAAATGGTCTATCAAAACTACAGGTAATTCAGATTAGGGCATTGTCATCCACTAAACCACATATCTGTTTTTATTCAGTACTCCCTCCGTACTCTTAAAGGAAGTCGTTTTGTACAGCGACCCGGTCTCCAAAACATAACTTTGACTTCTTGTTTCTATAAAAATATTTATTGAAAAGTGATATATGTATACTTTTATGAAAGTAGTTTTCAAGACAAATCTATTCATATAATTTTTACATTTTTAAACTCAACAATTTGAGAGTTATTCATGATTTATATTCCCAAGGTTTGACTTAAACATTGTCCTAAACGACTTCCTTTACAAGTACGGAGTAGTATAAACTAAAGACCACCCTCTAATGGGAATTTTTTTAGCTACACAAACAGTCCTCATTACTATACGAAGAAATTTGATTTCGGAAGTTAGACAATATTTGTGGTTGAGGATTGTCAATAAACACAAGAACACCAATTTTCCTTTAATGTTGTATGGTGATGACAGGACTTGAGGTCGTTATCATGCATTTTATGTCATTTTCAGCAGAGTACCTTTGTATTCTGTATGCAACAAGGAGATCGTGTGTATCCTATAGATTAGTGCTTCCACCCTAGTTGGTTTAACTAAAGTAGTGGTTTCTAAAGTAATGTTCATGCTTATTCTAACAATGCTTTGAATTCATACAATGGACTCATAATCATTGAGCAGTCTTAAAGTAGATGAGGCAGCAATTGACATGGCAAGTGCAGGTGATATACATCATAAGGAAGAAAACACATTGTAATGTTTGTTTTGTTCCAATTTCTACATACAACAACTAAATAATTTAAATGCAGCAAGTATGGAAAATAAACTCCAATTACCCTATTTAGAATCCCCAATCTAATGACAATGAAATGGAACATAAGTGGCTTCTCTCATGATCTAAACCTGTCAGGTTTCTCTACTTGTTTTATAGCCCACCATGTTTTAAATATGAAAGATTGTAGACAGCTGAAACATGGTATGCTGCATCCTTAGTTATAAATCATAATACCATTTTAATCTTTCAACAATCATTCTTCAGCATATTATCCATTGGTCATCAATTTATTTTTGGTCAATGTAGCATTTCTCGTCCCTTTTGTATTTAATGGAAGTACTTTCCTTAGCACTGTACCGTCTATATAAGCACTGTATTTATCACTGTTAATATCAACAGGTTTATTGGAAGAGTTGGAACAACTTCTTAAGGGTGTTGCTATGATGAAAGAACTAACTCCTAGGACACGGGATTACCTTGTTTCCTTCGGTGAATGCATGTCTACAAGAATATTTGCTGCATATTTGAATAAACTTGGGAAAAAGGCTCGGCAGGTACATACTTCCAGTAAATGTGTTGGTGCAGTAGTTTAATTGAAGGCTTGTTGAGTGCTTTGTTTTAATTTAGCTTCTAGATCCTTTTCATGATAATATAATTCAATATATTCTATCTAAAAATGCAACATCTGGACCTGTGAAAAAAAAAGAGAGAATATTACTACCGTAGCAAATTGACTAGGTTATAGGAATAAGGTAATTTTGGGGACTTCATTACATTTATCCCTTGCTCATTTGATTTATAGAGATTGTACATGGTTATTGCTAGTGCTATAGCACAAACTAAGAAATTTCTTTCCTTATCAATAGAGCTGATAACTTTCCTTTAAACCGCCAACTGAAACCTGCTAAGAAAAAATGGCATACGATCAGCTTATTTATAAAATATACATGAGTAATCCACTAAAACATAGTTCTTTTCGTTTTTTCTTGTTTCCTCTTAATTTCTCATATTCATTTCACCATAGGAACAATGCTGGTGTTCCACAGAAAGTTGATTTTATTGTGCTTCTATATGTGTATTCTTTTCTAATGGATTGTTATTATAATGGGTATATTTTAATTGTTATTTGGTACTTTTTGGTTCCATCAACACCTAAAAGTTCCTAAGCATGCAGCATTTACATGAAGTTTCAGTTGAAGCAGTTATTGGTATATGATGGTGGTCCAGGTGTTAGCTTGACGCTGTCTCAACTAAATTTTGCTTGATTGCAGTATGATGCGTTTGATATTGGCTTTATAACTACTGATGATTTCACAAATGCGGACATTCTTGAAGCAACATATCCTGCTGTTGCAAAGAGGTTACAGGGTGATTGGATTGATGACCCTGCTATTCCTATAGTTACTGGTTTCCTTGGAAAAGTATGTATTTTCCCATTACTCATGTTTAAGGCCATCGCACCTATTCTTTTGCATTTATGATGCTGCACTTGAATTAGATTTGTTATATTTGTGTTTATATCATGCACATCAAATTGCAGGGATGGAAATCATGTGCTGTCACCACTTTAGGCAGAGGTGGCAGCGACTTGACTGCTACCACTATTGGCAAAGCGTTGGGATTAAGAGAGATCCAGGTTTGTGTTCCTAAATTTGTGATAATTACCTGTTGAAAATCCACTTGCTCCCAGAACTCATTCAACACCTTTCAGCTTCTATGTGTAAACACATTTTCTTAGATCATTCCCATATGGAAGCCTTGTATTTCAGTTTTGTGTTCGTTCTGGTTCTGCAATTGGGGAAGTTGGTTAGATGTTTAACCATATCAGCTGAAAACTACAGATATGCTTTGTGGTGTCTCTCAGGTTCTGCCGGCTGTTATAACTCTTTTTTCTTTTTAAATCTCTAATAGGTATGGAAGGATGTAGATGGTGTGTTGACATGTGATCCTAATATTTGTGCAAACGCTATACCTGTACCCTACTTGACTTTTGAGGAGGCAGCTGAACTTGCCTACTTTGGTGCACAGGTATTGTAGAGCTTATTACCATGTGTTGATACAATTATTTGACACTCTCATGGTGATTGAGATAGAATGGTCAACTACTGTTGCCCTAACAGAAATACGTTTGCCAATTGTTAGGTTTTGCATCCCCAATCAATGAGACCAGCCAAAGAAGGTGGTATACCAGTTAGAGTTAAGAATTCATATAACCGTCGAGCACCTGGTACTGTCATTACTAAAACAAGAGATCTGAGCAAGGTTCGGCATAGGAATAGATTTTGATACGTCTGTTTGTAAATACTTCTTGTTAATTTCTGATTTGTGTACATTATTTTTCAGAGTATATTAACCAGCATTGTATTGAAGTCAAACATTACTATGCTGGATATAGTGAGCACAAGGATGCTTGGCCAGTATGGTTTTCTGGCGAAGGTATTTTAATATGCTTGTTGCTTTTCCTGATTGTTTTGTTGACTTAATGCATATCAGTAATTTGTTCATATTTCTATGCTCCTGTGCAGGTTTTCTCAATATTTGAAGATTTAGGTATCTCTGTTGATTGTGTGGCTACCAGTGAAGTCAGTATATCATTGACACTAGATCCATCAAAACTATGGTGTCGTGAATTGATCCAGCAGGTGAGTTTGAGACAGACCATGTTTCTATATACATGTGTATGTGTCAAATATTGGGTTTGGGGGTATGAATAAAATATTGTACAAAAGCCTGAAGCTTGAATTGCTTGCGAATAGCTGAATGTGTTTCATTTTTAGTTTTCTTTGGCTTTGACGAATATAGATACTTGGAACAGTAGATAGCCAACATCTAGAAACCTGTTAGGGCAATTTAAACTTAAAAGAACAGATACTGGATTCAAGTTGTTCTGCAGGATTAGCACTTTGCTGATACATCCTGAAAATACGTACTGCATCAGCTGTTCTCTTAATTCAATATTCATTTGTTTTCTTGGGATGATGTGGCAGGAACTTGATCATGTAGTTGAAGAACTTGAAAAAATTGCAGTTGTTCATCTACTGCAGCACAGGTCTATCATCTCACTGATAGGGAATGTACAGAGATCGTCATTGATTCTTGAGAAGGTTATTATCTCTTAGCTACCGAAAACTCTGGTTGGATATATTGTTGATGGACACGATTACTTGCAATCCTGTATGCTAGGGTGTACTTTTATTTTTGCAGAGCATTGACTGGTTCATTTTTGCATATAATCATTTACGTTTGTTGCTGTGTGCCAGGCTTTCAATGTTCTACGAAGAAATGGCGTTAACGTCCAGATGATCTCACAAGGGGCATCCAAGGTATCCTCTCTCCTCAGATGAACGAAATTCTTTTGTGCAAATGACCAAAGGGTGTATGACCATCCTCATTGTGCATGATCAGGTGAATATTTCATTGGTGGTCCATGATAGCGAGGCGAAACAGTGTATACAGGCCCTTCATTCAGCATTCTTTGAGAACGGTTTCTTGTCAGAAGTTGAGGAAGAGGATCTTCAACACAATGGCTCTCCTGTGAGCTCAAATGGTGTCATTTACGGAAACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013950