Os09g0470900

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Revision as of 07:28, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0470900| Description = Conserved hypothetical protein| Version = NM_001069972.1 GI:115479686 GeneID:4347334| Length = 5086 bp| Definition ...")
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Gene Name

Os09g0470900

Description

Conserved hypothetical protein

Version

NM_001069972.1 GI:115479686 GeneID:4347334

Length

5086 bp

Definition

Oryza sativa Japonica Group Os09g0470900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:18572488..18577573

Sequence Coding Region

18572627..18573151,18574010..18574216,18574298..18574537,18575067..18575133,18575234..18575377
,18575564..18575653,18576162..18576337,18576416..18576552,18576913..18577114

Expression

GEO Profiles:Os09g0470900

Genome Context

<gbrowseImage1> name=NC_008402:18572488..18577573 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:18572488..18577573 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgacggcgaggcctcctccggcgcgtacagggagttcaaggcgctgacggaggcggcggaccgcaagttcgcgcgcgcgcgcgacgtgccgctctacggcggcggggtggaccaccacagccggaaggcgttcaaggcgtacacgcggctgtggcgcctgcagcaggagcggcggcgggagctcgtcgcgggcgggctgcggcggtgggagatcggggaggtggcctcccggatcgggcagctctactacgcgcgctacctccgcaccgccgagccgcgctcgctcgtcggcgcctacgtgttctacgaggccatctacagccgcgggtacttcgccgccgcggcgcaggtggtggtgggcggcggctacaggcaccagggcctcctgatccggtacaaggagctgcggttcatcgcgcgcttcctcgtcgtggccatgctgatgcggcgggccgaggcggtggaccacctcgcttcccgcctccgttcgctcgtcgaggagaccaagtcggcataccccaaaaccaacttcaaggaatggaaacaagtgcttcaagagcttgggagattcttgaaagctgatggagcatacaagggatctagatcactgagatatgacaacttgtttgactcttttccgtcgaaccttgcacctattgcacgattccattcaaaaagagtactgaaactgaaagaagctgtattgacaagctatcacagaaacgaggtgaagttcacagaactaactctggacactttcagaatgctacagtgtctggagtgggaacccactgggtcttatcagattgctgccaaagagcttacagaaaatggcactataagtgatcagagtggaccctctggcctgattgatatccacctatcatcagaaatatctgatggaaatcttcctgcaaatcctcaaaaggcaatcatatatcatcctacagtatctcatcttctagcggttctagccacagtctgtgaggagctttctcaagatagcatcttacttgtctatctatcagcatcaggtttttccgagcagaacattacttctcaaaagtatgcctcaagctcatcatatgcaagggcaacttccgtgtatcccatcgataagccaaattccaatggcaattcagataatcatctatggcttggtccccgtggaagtggaggtccaaacaatctttatccagaagatctgattccctttacaagatatccactattccttgttatcgatagtgaaaatagtcatgcattcaaggctatacataatgcagagaagggagagccagctgccttgctactttcacctaggatagcatcagcaatgcctggtgtggaatccacgagtaatggaagccaatttacgtacttcctcacagctccaatgcaagccttctgccaattagctgggataacttctgacatagacagcgatacatatgctaacgcggaaatcatacttttctccgctttggaacaatatgaaggaatcctctgcacatctgttggattgaacaacgtctggggacaaattttaccagatccttttctcaggcgcctgatcgtcaggtttattttctgccgagcagttatattctattttcaccctgaggagaatggtgaacatataccaatctgcctacccagtcttccagaatcagtcgcgccaaatgctgaagccatcatggcccccatccttgagtttgcagaaaaccttgttgtgagcgaccggtttcatttccgacattctgtccacaacaataagaaatga</cdnaseq>

Protein Sequence

<aaseq>MADGEASSGAYREFKALTEAADRKFARARDVPLYGGGVDHHSRK AFKAYTRLWRLQQERRRELVAGGLRRWEIGEVASRIGQLYYARYLRTAEPRSLVGAYV FYEAIYSRGYFAAAAQVVVGGGYRHQGLLIRYKELRFIARFLVVAMLMRRAEAVDHLA SRLRSLVEETKSAYPKTNFKEWKQVLQELGRFLKADGAYKGSRSLRYDNLFDSFPSNL APIARFHSKRVLKLKEAVLTSYHRNEVKFTELTLDTFRMLQCLEWEPTGSYQIAAKEL TENGTISDQSGPSGLIDIHLSSEISDGNLPANPQKAIIYHPTVSHLLAVLATVCEELS QDSILLVYLSASGFSEQNITSQKYASSSSYARATSVYPIDKPNSNGNSDNHLWLGPRG SGGPNNLYPEDLIPFTRYPLFLVIDSENSHAFKAIHNAEKGEPAALLLSPRIASAMPG VESTSNGSQFTYFLTAPMQAFCQLAGITSDIDSDTYANAEIILFSALEQYEGILCTSV GLNNVWGQILPDPFLRRLIVRFIFCRAVIFYFHPEENGEHIPICLPSLPESVAPNAEA IMAPILEFAENLVVSDRFHFRHSVHNNKK</aaseq>

Gene Sequence

<dnaseqindica>140..664#1523..1729#1811..2050#2580..2646#2747..2890#3077..3166#3675..3850#3929..4065#4426..4627#atcacacacacactctctctcctctctttctcgcccgtttccccaccaccaccaccaccaccacctcccctctcccattcgaccaaatcggcgaggggaatagcccccccgcgcgccgcgcctcctctcgtcgccggcgatggccgacggcgaggcctcctccggcgcgtacagggagttcaaggcgctgacggaggcggcggaccgcaagttcgcgcgcgcgcgcgacgtgccgctctacggcggcggggtggaccaccacagccggaaggcgttcaaggcgtacacgcggctgtggcgcctgcagcaggagcggcggcgggagctcgtcgcgggcgggctgcggcggtgggagatcggggaggtggcctcccggatcgggcagctctactacgcgcgctacctccgcaccgccgagccgcgctcgctcgtcggcgcctacgtgttctacgaggccatctacagccgcgggtacttcgccgccgcggcgcaggtggtggtgggcggcggctacaggcaccagggcctcctgatccggtacaaggagctgcggttcatcgcgcgcttcctcgtcgtggccatgctgatgcggcgggccgaggcggtggaccacctcgcttcccgcctccgttcgctcgtcgaggagaccaagtcggcataccccgtaagaagcttagctcctctcgtgctttgaataggggaaccccgagttaagtttgtgcgcttgctgttttgtattttaggaaacctaaggagtaaggagacctttttaacttctagattagagtagtgaagaagagtgggaacttgttgatttgaaggttgttttgccgcttggttttgaaattttgatagaagtgatatgtacagtgctcttttttttttctgtataaagaattctgattgggaattttgacctggactgctgcttaatcaagggtttctatttatttcccaattcgattatatgtaatttaaaatggcaaattcgttctggtagtatgtaacttaaaatttaaaatcttactttatttgtggtgaactgaagtaatacgactgttcaatgctcgtcttaccattcggatttgggatattgcattgcatgagtcgtacatttcattaggataacggatttcgaatcatgtatggtttacagttttagctgctaaagtagaatcattctctttagttggtttgataattttaaagttactacgtactaaagtgtatgaactagagcaatttcacaagctctattacctttcaatagcatatatatcacattgttttgtcagtgcttaattgagaaatgatatgttgtttgagggttgaataatgaatgttatgctaaaacgatagcttagcatttaggagcctatgacatgagtgccttgttacatatttcccattttcttgcaatgttatatatttcaatagagaatcacatatttatatcctttctaattaaaacaccttgccatttaattcttccataacaactttgtgacctcatacttcttagaaaaccaacttcaaggaatggaaacaagtgcttcaagagcttgggagattcttgaaagctgatggagcatacaagggatctagatcactgagatatgacaacttgtttgactcttttccgtcgaaccttgcacctattgcacgattccattcaaaaagagtactgaaactgaaagaagctgtattgacaagctatcacagaaacgaggtcacatatattatccatcaataattgacccacttatcttactgtgaaaacaagcttgacattttgtaatatgtaatgcaggtgaagttcacagaactaactctggacactttcagaatgctacagtgtctggagtgggaacccactgggtcttatcagattgctgccaaagagcttacagaaaatggcactataagtgatcagagtggaccctctggcctgattgatatccacctatcatcagaaatatctgatggaaatcttcctgcaaatcctcaaaaggcaatcatatatcatcctacagtatctcatcttctagcggtaggttgtttatgcatgttgttctctttgaagctcagttttacataagatggaaatcaaatcttgatagaatcacggatcttcttttaggagattactcttgaaatgatatattatgctcaccatccagtgaactggatgcgtattttcccctttaacaatgtcattagctttatatcaatacaattgtctggttgacgtttgtgttgggttagcaagtctgtgcaagtcctcatcatgcctggatgttgtcatagttagatcggctgctgctgcacattataatttatttggtggtggaaccacccacttatttggcagtatactgtaccatttctcatgacacaaatggaaaaatgtgagaatatttcagctttgccaagttgcagtgctgattgacaatggggttaattgttgcaatccattggaatgtacttttattcattcacgagtttgatggtccatatgatttgttcttttgctatttgaaccttttttgtagtgttacatcagaaattcgtaatttcaggttctagccacagtctgtgaggagctttctcaagatagcatcttacttgtctatctatcagcatcaggttcccttcttgatctgactctgtaaaacatctagtaacattcttgttttgagtagttattaggttcttacccttctaactttagtgatcaaaatttcaggtttttccgagcagaacattacttctcaaaagtatgcctcaagctcatcatatgcaagggcaacttccgtgtatcccatcgataagccaaattccaatggcaattcagataatcatctatggcttggtccccgtggaagtggaggtaaagcatctgtcttcttgtagggttgatttctggaattatatctcagtgtaatgatatagttcaattaagcccactttttatggtatactaggttagtgtccgactagactgatggtctagtttcttgttgaaaggttgatacagtatgcattttctattctgacatgactgtatctttaccaggtccaaacaatctttatccagaagatctgattccctttacaagatatccactattccttgttatcgatagtgaaaatagtcatgcattcaaggcaggtttgtcagaacttaatcttagcttggtagatgaaaatcattatcatgagtattttgttatttttcagagccaaacttactaccctggattgcccatgccttttgttctgtagttcctatatggctttatttacattcattgtggatgaagggtcttgtattctcatttgttttgaagttcctactatttaacctactgtaatataaagcaagctgcagtagtttttttcaacagagcatatgatttttctttccattttcatagatcactgtattgctaaaatctaggcactggctatccatagtagcttgtgaatccatcatttgattctgtatttttccaagtacattttaaaaactttaaacaaaatattctttcagaaaaaaaagataattaacttaatactacgaagggttttctcttttcattatgtttctaacaatttttttccctgttcttaaaaaaatgggagaacgaatttcttatatgagccataattgcaggctatacataatgcagagaagggagagccagctgccttgctactttcacctaggatagcatcagcaatgcctggtgtggaatccacgagtaatggaagccaatttacgtacttcctcacagctccaatgcaagccttctgccaattagctgggataacttctgacatagacagcgtatgcactttccttgaagagtcgagtatttgtggaatattgatttctatattttgagctcttctgcttggttttcaggatacatatgctaacgcggaaatcatacttttctccgctttggaacaatatgaaggaatcctctgcacatctgttggattgaacaacgtctggggacaaattttaccagatccttttctcaggcgcctgatcgtcaggtacctttttccatatatctccacattcaatgttttgactatctgccatttggttggaaggttagcattgcatcatcgcttgaagatagtatcttgacctcttccaaaacatgaaagtggttatttaacatgactagttaatagtacacaacttgagctcctgtccattgcgatatttcctgcaaaccgccggtgggcttgtgaacaagtctatggaggtgtaaaagggaacagtggaaggatggttttacagcaccatacctgtacataatcagaactctccatgttgcattccaagacattattttgttccatatttattgcattgtgccaaatcatattccttcttttaatttgcaggtttattttctgccgagcagttatattctattttcaccctgaggagaatggtgaacatataccaatctgcctacccagtcttccagaatcagtcgcgccaaatgctgaagccatcatggcccccatccttgagtttgcagaaaaccttgttgtgagcgaccggtttcatttccgacattctgtccacaacaataagaaatgatgatcaggagcaacaactcaatccttctgtagatacctccatggtatataatcaagttatttgttgatttgttcgtatttatacagcaaacggagcatgattcagtatgaacaggctgctgcagcagctgcagcttggagagggtgaatgatttatcatttttcgctgcttcatctccattgagcatctgtacaagtttggttaggtggtccttacttttgatctaggcagtgtagggcttctctttccttttctttcggtttgtggtggagaggacagtttgtaagctggaagaggcattttttagtaccccggaaggcaaattgttttttagggttagcccaatattttgagagttagtttactaccatcggatgcattgcgttgcacatttgtctagtgcacccaacgtttgtaattgttgtttgtcctgaatgaagggttctggattattgtctg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0470900, RefSeq:Os09g0470900