Os07g0548300

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Revision as of 08:40, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0548300| Description = Similar to CRP1| Version = NM_001066462.1 GI:115472656 GeneID:4343532| Length = 2760 bp| Definition = Oryza sativa ...")
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Gene Name

Os07g0548300

Description

Similar to CRP1

Version

NM_001066462.1 GI:115472656 GeneID:4343532

Length

2760 bp

Definition

Oryza sativa Japonica Group Os07g0548300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:22414011..22416770

Sequence Coding Region

22414011..22415660,22416019..22416171,22416300..22416371,22416660..22416770

Expression

GEO Profiles:Os07g0548300

Genome Context

<gbrowseImage1> name=NC_008400:22414011..22416770 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:22414011..22416770 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcccgcctcctccctcctcccccccaccctcctccctcaccgccaccgcctccgcctccctcccgccggctgctccacctcctcgtcgccctccgcgacccgctacgacttcgacccgctcctgagctacctctccaccacctcctcctcgccgtccccgccgccgacctccgtgctgcccgtgacggagagcaggctggcggcgtcgtacgcggccgtccccgcgcgggagtggcacgcgctgctgcgggagctcgccgccaccgacgcgtccctgccgctcgccttcgcgctgctcccgttcctccaccgccaccgcctctgcttcccgctcgacctgctgctgtcgtcgctcctccactcgctgtcggtgtcgggccgcctgctcccgcactcgctgctgctctccttcccgccgtcgctctccgacccgccgtcgccgctgctgctcaactccctcctcgccgcctccgccgccgcgtcgcgccccgccgtcgcgctgcgcctcctcggcctcctccgcgagcacagcttcctcccggacctcgcctcctactcccacctcctcgcgtcgctgctcaacacccgggacccgcccgacgccgcgctcctcgaccgcctcctcggcgacctcagggagtcccgcctcgagcccgacgcgcccctcttctccgacctcatctccgccttcgcgcgggcccggctgcctgacgccgcgctcgagctcctcgcctccgcgcaggccatcgggctaacgccacgctccaacgcggtcaccgcgctcatctcctccctcgggtccgcaaggcgcgtcgccgaggctgaggctctgttcctcgagttcttccttgccggggagatcaagccacggacgcgtgcctacaacgcgctgctgaaagggtatgtgaagattgggtcactcaagaatgccgagcaagtgctcgacgaaatgtcgcaatgcggagttgcgcctgatgaggccacgtacagcctactcgtggatgcctatacgagggctgggcgatgggagagcgcaaggatacttcttaaggagatggaggccgatggagtcaaaccaagctcatatgtgttcagccggatccttgcaggtttccgtgataggggggaatggcaaaaggcatttgcggtgctccgcgagatgcatgcgagtggggttcgccctgaccgccatttctacaatgttatgatagatacatttgggaagtacaactgccttgggcatgccatggatgcatttgatcggatgcgagaagaagggattgagccggatgttgtcacatggaacacacttattgatgcgcactgtaagggaggacggcatgaccgtgccatagagctgtttgatgagatgcgtgaaagcaactgcccgctaggcacaaccacatataacatcatgatcaacttgcttggtgaagagcaacgatgggagggggtagaagcaatgctagcagagatgaaggaacagggattggtgccaaacattatcacatacactacacttgtggatgtatatggtcggtctggcaggttcaaggaggcagttgattgcattgaggcaatgaaagcggatggcctgaaaccatcacctaccatgtaccatgccttagtcaatgcatacgctcaaaggggtttagcagaccacgcgttaaatgttgtcaaggccatgagagcagatggcctagaggctagcacagtagttctaaactccttgatcaatgcttttggtgaggatagaaggattgctgaagccttctctgtgttgcaattcatgaaggaaaatggtttaaggcctgatgttataacatatactacactaatgaaagctttaatccgtgttgagcagtttgaaaaggttccagttatctatgaagaaatgatcacatcaggatgtgcccctgatcgaaaagctagagcaatgctgcgatcagctttgagatacatgaaacacatgagggttgcatag</cdnaseq>

Protein Sequence

<aaseq>MPASSLLPPTLLPHRHRLRLPPAGCSTSSSPSATRYDFDPLLSY LSTTSSSPSPPPTSVLPVTESRLAASYAAVPAREWHALLRELAATDASLPLAFALLPF LHRHRLCFPLDLLLSSLLHSLSVSGRLLPHSLLLSFPPSLSDPPSPLLLNSLLAASAA ASRPAVALRLLGLLREHSFLPDLASYSHLLASLLNTRDPPDAALLDRLLGDLRESRLE PDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAE ALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLV DAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASG VRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDR AIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTL VDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRAD GLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFE KVPVIYEEMITSGCAPDRKARAMLRSALRYMKHMRVA</aaseq>

Gene Sequence

<dnaseqindica>1..1650#2009..2161#2290..2361#2650..2760#atgcccgcctcctccctcctcccccccaccctcctccctcaccgccaccgcctccgcctccctcccgccggctgctccacctcctcgtcgccctccgcgacccgctacgacttcgacccgctcctgagctacctctccaccacctcctcctcgccgtccccgccgccgacctccgtgctgcccgtgacggagagcaggctggcggcgtcgtacgcggccgtccccgcgcgggagtggcacgcgctgctgcgggagctcgccgccaccgacgcgtccctgccgctcgccttcgcgctgctcccgttcctccaccgccaccgcctctgcttcccgctcgacctgctgctgtcgtcgctcctccactcgctgtcggtgtcgggccgcctgctcccgcactcgctgctgctctccttcccgccgtcgctctccgacccgccgtcgccgctgctgctcaactccctcctcgccgcctccgccgccgcgtcgcgccccgccgtcgcgctgcgcctcctcggcctcctccgcgagcacagcttcctcccggacctcgcctcctactcccacctcctcgcgtcgctgctcaacacccgggacccgcccgacgccgcgctcctcgaccgcctcctcggcgacctcagggagtcccgcctcgagcccgacgcgcccctcttctccgacctcatctccgccttcgcgcgggcccggctgcctgacgccgcgctcgagctcctcgcctccgcgcaggccatcgggctaacgccacgctccaacgcggtcaccgcgctcatctcctccctcgggtccgcaaggcgcgtcgccgaggctgaggctctgttcctcgagttcttccttgccggggagatcaagccacggacgcgtgcctacaacgcgctgctgaaagggtatgtgaagattgggtcactcaagaatgccgagcaagtgctcgacgaaatgtcgcaatgcggagttgcgcctgatgaggccacgtacagcctactcgtggatgcctatacgagggctgggcgatgggagagcgcaaggatacttcttaaggagatggaggccgatggagtcaaaccaagctcatatgtgttcagccggatccttgcaggtttccgtgataggggggaatggcaaaaggcatttgcggtgctccgcgagatgcatgcgagtggggttcgccctgaccgccatttctacaatgttatgatagatacatttgggaagtacaactgccttgggcatgccatggatgcatttgatcggatgcgagaagaagggattgagccggatgttgtcacatggaacacacttattgatgcgcactgtaagggaggacggcatgaccgtgccatagagctgtttgatgagatgcgtgaaagcaactgcccgctaggcacaaccacatataacatcatgatcaacttgcttggtgaagagcaacgatgggagggggtagaagcaatgctagcagagatgaaggaacagggattggtgccaaacattatcacatacactacacttgtggatgtatatggtcggtctggcaggttcaaggaggcagttgattgcattgaggcaatgaaagcggatggcctgaaaccatcacctaccatgtaccatgccttagtcaatgcatacgctcaaagggtgagttctctactgcgcagtttcctagatgacttgataggtaggttaaagtgaagcatgctttacactgtctttttaaaattttcttcatgctaggcaataccccaatcaagaaatatttgaacctatataatctaactttatatagtaagttactgatttgggaactaattgacttgtgcgttagtatactataggatttgagcttattcttttgggattgcgttattggttgcaagagttttacaaattagtgttgcagtgttaacataattttgccagattaagtgagcttagcagatttaaattaaaacattggttctcaactcctcatgattcatgcatggaacttctccagggtttagcagaccacgcgttaaatgttgtcaaggccatgagagcagatggcctagaggctagcacagtagttctaaactccttgatcaatgcttttggtgaggatagaaggattgctgaagccttctctgtgttgcaattcatgaaggaaaatgtaagtagttgtgctgttctttgttttgctgttttgtcttacatcgtattacctctggatgatcacattatcttagaaatttatctgtatctcatgaaaagtcatatattctgtattctggattgcagggtttaaggcctgatgttataacatatactacactaatgaaagctttaatccgtgttgagcagtttgaaaaggtatcgtactcgtgatttgtgaacctcttctccagttgcagttattaagttacattcaggcacatctgctgaacctataaaattaaacttgtctgctatcatagctttcactgtactctgataaccaaaacagcttccttcgttctacagtgttataaatcatatagttttctttgattgtctagacctgcaatttctgactgatttaaaggtataagcctgcaagctccatagaaagcaagcatgttctaaggtgttgcacgttgtggtttgttgataatgttacaggttccagttatctatgaagaaatgatcacatcaggatgtgcccctgatcgaaaagctagagcaatgctgcgatcagctttgagatacatgaaacacatgagggttgcatag</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0548300, RefSeq:Os07g0548300