Os07g0548500

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Revision as of 08:40, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0548500| Description = Conserved hypothetical protein| Version = NM_001066463.1 GI:115472658 GeneID:4343533| Length = 3410 bp| Definition ...")
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Gene Name

Os07g0548500

Description

Conserved hypothetical protein

Version

NM_001066463.1 GI:115472658 GeneID:4343533

Length

3410 bp

Definition

Oryza sativa Japonica Group Os07g0548500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:22420763..22424172

Sequence Coding Region

22421397..22422023,22423026..22423196,22423617..22423916

Expression

GEO Profiles:Os07g0548500

Genome Context

<gbrowseImage1> name=NC_008400:22420763..22424172 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:22420763..22424172 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctcttcgacgaggtattcagcgatccaatcgaagaaagaggcgcgctcgagctcccctgcttcacgagagccaccaagatagcgctgcgcctggggtttcttggcctatcgctgccgccgtcgggcgtcttcgccgcgctcagggagctgcgcctttcgtttgtccggttccatggcgaactcaccctggacgatactgtgatgccgttcttggaagggctagagatctacagtgcccgtgtcttggcctccctgacgctcaggctgaagcatctcaactggatgaatctgtccgctgtgcggggattgcttcggctcaatgccgtggtgccgagactcaagttcttgactgtatcctgttgcttctgttcttcgacatggctggttgcaatggcgggcgtctgcattgttgcagaggagctgcaggtgctcaggtggctagattggtactgtccaagattgatcaagttcagccagatgccgcgcctctatgtgctaagcgtctccccattttatccttatggacggcatcgtcagcatactaaattcaatccgagctgtgacaggcttctcaagacattttcacgcattcgttgtctcgagatgttggttttcatcgaaccacacctaggtggcgttaatccattgatggaaggcataaccagactccctgacattaggttcttgcacctacaattctcagcacatgggcatgtttatggagctagtgtgttgtatatgctgacaatgtgtactggtatatcaaacctaaaaatcggaggagatcgttacaaggatcaagatgtgtgtccaccgaactgcagctgtgatcggccaccgaactggagagataataaggacatttcgatgaggtctctaagagaagtgcagatgctcaacttcagaggaaaggaacatgagcttgaccttctgagggtcttagtcagggtagcaacaggcattaggaggatcagaataacctgccatcgttcgttcgctgcttgggagagactgtctgcagtcatacgaagttttgcaagaccagagacttctgtggaagtgagtcaagcccctccctctttgcagcgacagtga</cdnaseq>

Protein Sequence

<aaseq>MLFDEVFSDPIEERGALELPCFTRATKIALRLGFLGLSLPPSGV FAALRELRLSFVRFHGELTLDDTVMPFLEGLEIYSARVLASLTLRLKHLNWMNLSAVR GLLRLNAVVPRLKFLTVSCCFCSSTWLVAMAGVCIVAEELQVLRWLDWYCPRLIKFSQ MPRLYVLSVSPFYPYGRHRQHTKFNPSCDRLLKTFSRIRCLEMLVFIEPHLGGVNPLM EGITRLPDIRFLHLQFSAHGHVYGASVLYMLTMCTGISNLKIGGDRYKDQDVCPPNCS CDRPPNWRDNKDISMRSLREVQMLNFRGKEHELDLLRVLVRVATGIRRIRITCHRSFA AWERLSAVIRSFARPETSVEVSQAPPSLQRQ</aaseq>

Gene Sequence

<dnaseqindica>635..1261#2264..2434#2855..3154#gacaaatccatagagaccacccccaacccacggccatggcggttctcgtcccgatcgacggcgacggcgacggagagggagagggaggtagagccaaggccgtcaccgaccccgccccggcccccgttcccgctcccatggacatcgacggcgatcgcggcgcactcgacgtcctcgccccccgcccccatggccatggacctcgaccgcgaccgcggccgcgaccgggacggatacggcgacggagcggcgctcgtcgcctccaccagcaacgggcgcgggcggggccgcggccacctcaacgatctccccgaggacatcctcgccgtcattttgcgccgcctcttggacacccgcgccgccgccaggaccagctttgctgtcccgccgctggcgccacgtctggaaatgggtgtccggcctcttcttgcatcactaccagccccacgactccagcatcgtgcgcgccgccctcgccgcccacgccgtgcacgcggtcaccaacatcaacaagctctacgtcgtctgcctccgcagcgccacgccggacgccaccgcctcctggatccgcgtcgccgcgcccctcatctccggagagctcgccttctgcaacagggcctcggttccgttccacatgctcttcgacgaggtattcagcgatccaatcgaagaaagaggcgcgctcgagctcccctgcttcacgagagccaccaagatagcgctgcgcctggggtttcttggcctatcgctgccgccgtcgggcgtcttcgccgcgctcagggagctgcgcctttcgtttgtccggttccatggcgaactcaccctggacgatactgtgatgccgttcttggaagggctagagatctacagtgcccgtgtcttggcctccctgacgctcaggctgaagcatctcaactggatgaatctgtccgctgtgcggggattgcttcggctcaatgccgtggtgccgagactcaagttcttgactgtatcctgttgcttctgttcttcgacatggctggttgcaatggcgggcgtctgcattgttgcagaggagctgcaggtgctcaggtggctagattggtactgtccaagattgatcaagttcagccagatgccgcgcctctatgtgctaagcgtctccccattttatccttatggacggcatcgtcagcatactaaattcaatccgagctgtgacaggcttctcaagacattttcacgcattcgttgtctcgagatgttggttttcatcgaaccagtgagtgcttcttctttctctgtatcattgcatggtcatcagctgtgtattgttcaagagtagtttaaactgttaatggaagatcagttggaataattaagtgcacaggtcatgggggttgtaaactcaattctgaatgctttgattcaatgattctgctgtagtatttactgggctatgttttctgttgcagaaagaacaatcttgaactgaaggtcgaaatttttgcatgtgttctttggacaagattcttcctaatcatactttctgttgaaaagatcaattgtcgcacactagcagaatgttgaatattgtcctcaactagttaagaaagttacaggccaggagaataatctactaagtcacagaccagcagaacaatcttgaactgaagttcagaattattttttgtagatgtgatctttggagaagattctttcaattgatactttatttctgtagaaaagatcaattgccccatacttgcattcagtctagtctttgtcttaataggagtacgagtcttggtaagctagcataattgcaagtcacgctttcattctggatatactgatgcagtttctgagttgttaccatatagatcagcactcattatctgttagttcagcattatcttgctttttttagtagaatcagcattatcctgttgttgaacatgatcatgcagatgcatctaatgatttaaatttacttgcaccattgaattcagactattgatttctattcctggtgacccaaaagtagcagacatatatggaaggtttccaatctgaaaatgttggctcaagctagatattctgcaagcaaattactgaatctttactactcctcaagcaaattacttaaatatttactagtctgtgaccaaattactaattcttcacagtacaaccctttgtcgtacatatttgattcttttcctgtcagttttgcattttgtgtgaggttgcctttgtaaattaactttgtatgatttcacagcacctaggtggcgttaatccattgatggaaggcataaccagactccctgacattaggttcttgcacctacaattctcagcacatgggcatgtttatggagctagtgtgttgtatatgctgacaatgtgtactggtatatcaaacctaaaaatcggaggagatcgttacaaggtaattatatttcctatgaaaatgattgtgtttttgaactctaatttatatgcttgtaataaatcttgagcaagtggaatcacatatgatccgtcggcttaggcaggaagttatcaattatgccctattgatggcacaaaagtaactcctaatatgagttaatagataaatagtgcttttttgtgaccaaattcatatagttgtcttatcattatatcccactttgatcatttattctttgctgttgtcctttagatcatacaatctgccatgaaaaagatccatgaaagtttaagagtttttatttatagcactgaaatcatgctttgcaatataaaatgaagttttcacatctgctcaacgtgttaggatatgaatctcattaatagctcgtattttgttccgatcttgtaatttcaggatcaagatgtgtgtccaccgaactgcagctgtgatcggccaccgaactggagagataataaggacatttcgatgaggtctctaagagaagtgcagatgctcaacttcagaggaaaggaacatgagcttgaccttctgagggtcttagtcagggtagcaacaggcattaggaggatcagaataacctgccatcgttcgttcgctgcttgggagagactgtctgcagtcatacgaagttttgcaagaccagagacttctgtggaagtgagtcaagcccctccctctttgcagcgacagtgaactgagaagtaagaagaagctttgttaaaaaaagaagaagaagaagcagctttgttggctgccgacccttgatgtacctggcatgttttggcccgattgtgctgtaaagaaaggaacagagaaactgatctagctgcggccaattttgctgccattgtagtttgtcctcatgaacaattcttagcatttgacattctggaatgccttttgttagtatggtgcagggtgcacttgttgcttagtttggtcagaactg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0548500, RefSeq:Os07g0548500