Os07g0549700

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Revision as of 08:40, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0549700| Description = ATPase, V1 complex, subunit H family protein| Version = NM_001188320.1 GI:297725770 GeneID:9272111| Length = 5730 bp...")
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Gene Name

Os07g0549700

Description

ATPase, V1 complex, subunit H family protein

Version

NM_001188320.1 GI:297725770 GeneID:9272111

Length

5730 bp

Definition

Oryza sativa Japonica Group Os07g0549700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:22476751..22482480

Sequence Coding Region

22477055..22477084,22478376..22478501,22478697..22478799,22478883..22478954,22479550..22479560

Expression

GEO Profiles:Os07g0549700

Genome Context

<gbrowseImage1> name=NC_008400:22476751..22482480 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:22476751..22482480 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcacgcggagctgaccaccgagcaggttctcaagagggatattccatgggaatcatacatggcaaataagctgatttccgggacatgccttcagcttttgcgacgttatgaccacaaaccagaaagccaacgaggtcctttgcttgatgaggatgggccatcctatgttcgagtgttcctgaatatcttgcggaacatctccaaggaagatactgttgaatatgtgcttgccctgattgatgagatgcttgcagtaaatcctaaacgagcagcactgttctatgataactctctctctggtgaagacatctacgaccctttcctaaattgctcttga</cdnaseq>

Protein Sequence

<aaseq>MDHAELTTEQVLKRDIPWESYMANKLISGTCLQLLRRYDHKPES QRGPLLDEDGPSYVRVFLNILRNISKEDTVEYVLALIDEMLAVNPKRAALFYDNSLSG EDIYDPFLNCS</aaseq>

Gene Sequence

<dnaseqindica>305..334#1626..1751#1947..2049#2133..2204#2800..2810#ctctctctcttcttctcttctcttctcctctcttccccgtcgccgcgcacctcccgatccctccctccgctcgctcgcccatcgcgccaggtgagccaacgcccgcgatcccaccactcctctcgagtcgctcgcttgcgagcgcgcgcgcggtgcggcgcggcgtcaccccgatcgctgtggttggggattttccgggggttcgatcggatccgtgggctgaggaaaccggggggcgttttgatctgatccgtggcttgatttttcgtctgctcttgcaggtgggctctttggacacccggtgatggatcacgcggagctgaccaccgagcaggttagttagtgattgggatttgcctcctcccccgcggggcggatttagctttggtgtgctgataaacctgttctactgtcgaattgttgatgcttgcgagcttccatgtgttcaaagtgtttatgatttagtacctgtctacattgtagtagattataagtatgcttacgctcatagatgggataccctttgcgatcgatcagtgttaaccagcgtggttttcgagtggaagtagatgccgttgtgattgtgttaggaagtgagaagatttttcatataaggtgtttttcaactgagtagagtgtcaggagaattttaacggagtagattatggtgtagtggtatttggaagctgaccagttttttttcctctcacttcaatgcatgcttttatgttgggggttagactggtaatcatgggtttgtccgaatactactttatcaagtcatgtccgaactaaactatagttgtgaactttttctttagctaaaaagcggtctgtttcattgatagaatctgcgattgtcctgttaaggatttttagctaaaataccagcttgtaaagtatagtatgggtcgattctaacatcttacgtgactctgtccttcattagagattgcacagaattttgttctgcttccacagagatatgcctatggtttatggacgcattcagttcttatgtatgtgccacagtaacatgtaaaatttgcttttattgaagggaactgtaaacatcaaattgggaatggcaaacttttccgtactgtaatattgttacttttctggtggacaaaatcctccttttttcttgtaccacggataaattctggctctaggcaacagtgaacctgctgatatgtgttctgtcatactccctccgtttcataatgtaagactttctagcattatccacatttatatagatgttaatgaatctagacacacatatatgtttagattcattaacatctatatgaatgtgggcaatgctagaatgacttacattatgaaatggaggaagtatatattatgcattataggctttgtagattttagtgttagcctgttaggcactgaactgcagatgctatctaatttgtgtctatcaagttcatgcgaaagtataaatttgtcacattcccccgaatacttgtcatgttccttgatagatagggctcctttttccatgagaacttcttgagcgtagaaaaattttcatttgcattacattttatgggggaaaaacttgctttatgctgatctggactctgtctttgcatttcaaggttctcaagagggatattccatgggaatcatacatggcaaataagctgatttccgggacatgccttcagcttttgcgacgttatgaccacaaaccagaaagccaacgaggtcctttgcttgatgaggtgagtgtcgttctcatcctcaacaatttctgtgggtaaatgagtttaagcaccatcatgtgatcgcttttccttaagagatttcatattgacttcttagtgctgattttgctgttttgtgcacttctgtttggctatggtaatttgcatttgcaactgttctcttgacataatgtccactggaaattcttttaggatgggccatcctatgttcgagtgttcctgaatatcttgcggaacatctccaaggaagatactgttgaatatgtgcttgccctgattgatgagatgcttgcaggtgggaaactagttatctgcgatatggttaaacaaaactcttctgatgagttacacctgttaaataattgcctttgttttcagtaaatcctaaacgagcagcactgttctatgataactctctctctggtgaagacatctacgaccctttcctaagttaagtattctagaattgtatatgttctattatgagttttttcataataccatcttacctgtaatctaatgtgttgtaaagatagaaataaaccaacatagactgtgacagatttcttgtatattttgaagaggcattgtcatgggaaggatacatcttgtaattgttgaattggtctaccttacagtaggataggatcattctgtggcggctataaaaaccaaagagatgatcagttgatcatacaatgtgatgtcattatcaacatttggcatagttccagatcagttacttggataaatttttacctgtgtgctgttatcctcaatggtataatttgagaatgtcagatatttcttctcctaatctcagttatctcacatttatccatgaacttatgccatccaagatttcaccatccaatcctggcaactatactatagatactaaaccattacgttggttaaacacgtgattttacaccatctaaactgggatgaatcaaccagtctaactgtttacaatctttgcatttttgttgtttaggtttgatctctgattgtcatatttagctaacaaaattgtcgttttcagattgctcttgaaaggtaactggtttgtgcaagaaaaaagttgtaagatattgacccaaataataaggtatgttctgtccatatctgcgtgtttgttgtcttgttctggagagtctaatttttatgcgattatagtgcacgacccaagatgcagaatggcatagttccaaatggagaggcttcaaattcaaagagcaagctaacatctactcaagatgtgttaagaggtttggttgattggctctgttctcaggtataacctgcgaatggcctaatttattctaccctttcatatactatgttacaaaactagtgttcaagggttctgaactttgagaatgttgtgttttgcagctgaggaatcctacccacccaaactgttctgttcctactgctatgcattgtcttgccactttgctaagagagcagtatgttagagctttatttgttcaggcggatggtgtaaaactgctcattcctttaatttctccagcttccacacaacagtcgatccaggtatttgttgagtcctgtaataataaccaaagctgaacttttctttccccaaattgctatattcttttccttgatataggatacatatatcaatttccttttttttgttttaaaagggagcttttcaaaactaacgagctaattaacaaacgggatattcacctttgatgagatgccatatttaacaagattgtgcacatacacggacatcaaacataactgttctctcatttactttgtgaactaatttgctcaaccttctgcttacccttattgtgtcatttgcagcttctctacgaaacttgcctctgcatctggcttttatccttttatgatgcagccgttgattatttgtccactacaagggttatgccaagacttgtagaggttgtgaaaggttcaacaaaagagaaggtgaggtttgaagtattgttgttttgtcgtgttgtcacatctcctttgtatcagaaataccattcatgtttttcctaaaataattgcaggttgtcagggtcgttatcatgtctatccgtaacttgcttgcaaagggtgcgtttgctgcccaaatgattgatcttggactgccacacatagtacagaatttgaaagctcaagcatggactgatgaggtgaggagcttaccaaggcttttgatttcaatttttgcattgacaggatataattcataccatctttatatctgaagcatagtttgaagcaaaatatttcaagggagttaaaagacaagcatatcctttcttatactgtcccatctgaaataaataaccctttaggagtccagcactccagcataataaagtgttgtcttcgttactactttacttcaaactgtatgctgcgtagtgaactttgtgagttatttactccagcataataaataatcctttaggagtccagaacagttccgtttttgctatgtctcacaatattattaagcacatgaatttctacgactttctatgccttaagaaacatgtatagttttttttgctgtgaacgtgttttaacatgatttacatgtatgtatactttcagaatatttaaaaatcatacaagggcaaaaggggtgtatctacacttgaactgtcaaatatgtttatttattcacatttgagcttgtctttatctcttttgaactgacaaccttctttttacaacctatgcacccaggatttattagatgcgctgaatcagctagaaataggactcaaagacaaccttaagaagttgagttcatttgagaagtacaagcaacaagttcttcttggccatcttgactggtctccaatgcacaaagacccaagtttctggcgcgagaacattaataattttgaagaaaatgatttccaggtatgctttgtcctttattggatgggaaatattccaatcaatattttatggaacttcagtaagactattggagattctttatgcttgcccttgttccaggtcattccttgagccaattcacatacaattcaaaatgaatgccaaaatacttatgagcacgttaatacccctgtatagcatatgttcatacctgcagattctacggccgtttgatgcggttaattaatcttatgatcttcgttttctcttgtaagaattgaccaagtagcacacgattatatacaggatgtagttaaacccagacacttctatttaatatatttatataccagtatatactaccacgcatcatgtggttattgactggtcacagttagcacccgatcaaagctttgcctataataattcaaacaaatgaaaaccctaatttatctgtaatttttttaagtagtggactcaaacataaatattttgaaataacaccgtcaactttcaatttttgcagattctacgtgtgcttatgacaatcatcgacacatcggccgacacgactgctcttgctgtcgcctgctatgacctctcacagttccttcagtaccacccttctgggcgcattgtggtggcagatctgaaggcgaaggaccgagtgatgaagctcatgaaccacgagaacgccgaagtgaggaagaatgccctgctctgcgtgcagaggcttttccttggtgcgaagtacgcgagcttcctgcagacctaagacccagacaagaaactcttgaagttttgtatttatgctttagagccagagaaacaccaggccatttgtcataaatggtgaaaaccatgattgagaaagacagacctcgaaaattcttgtccagtatatcctgtcgttatttcatttactaaaccgatgtataataaataatcagctattccttgctcgatgtaataaagtgtcacagagcttgtttcttcctttcctctgaagatgtttttgtccgaggaagcacacacgggttatgtataataattttcaatttctgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0549700, RefSeq:Os07g0549700