Os07g0549800

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Revision as of 08:40, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0549800| Description = Similar to RGP-3 (Fragment)| Version = NM_001066470.1 GI:115472672 GeneID:4343540| Length = 2212 bp| Definition = O...")
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Gene Name

Os07g0549800

Description

Similar to RGP-3 (Fragment)

Version

NM_001066470.1 GI:115472672 GeneID:4343540

Length

2212 bp

Definition

Oryza sativa Japonica Group Os07g0549800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:22483170..22485381

Sequence Coding Region

22483306..22483426,22484628..22484696,22484784..22484890,22485047..22485151

Expression

GEO Profiles:Os07g0549800

Genome Context

<gbrowseImage1> name=NC_008400:22483170..22485381 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:22483170..22485381 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggccgctgctcgcgccgggttccggcggatgttctccgtctcgggcttcacgccgccgcctccccccgccgcccgccccttggcggacccctgcaacaacctcttcgtctcagggttgaataaacgcacgacatctgacggacttagggaagccttctcgaaattcggtcaggttattgaagctagagtaatcactgatagaatatctggatactctcgaggatttggctttgtcaaatatgcaactgttgaagaagccggtgagggcataaaaggcatggatggaaagttcctcgatggttgggtgatatttgccgagtacgccaagcagagagaagcacagcagccggcccaaccagcagcatcaactagttaccaatactccaaccaatga</cdnaseq>

Protein Sequence

<aaseq>MAAAAARAGFRRMFSVSGFTPPPPPAARPLADPCNNLFVSGLNK RTTSDGLREAFSKFGQVIEARVITDRISGYSRGFGFVKYATVEEAGEGIKGMDGKFLD GWVIFAEYAKQREAQQPAQPAASTSYQYSNQ</aaseq>

Gene Sequence

<dnaseqindica>137..257#1459..1527#1615..1721#1878..1982#gattgagctctctcgacttctcgaatggtctcgaccatcttcgctaaacccttccttggtcgccgccgcgccgcaaagcctccgtccgttccgcaccgccgctctcttccccgccaccgtcggtcgctggctgagtatggcggcggccgctgctcgcgccgggttccggcggatgttctccgtctcgggcttcacgccgccgcctccccccgccgcccgccccttggcggacccctgcaacaacctcttcgtctcaggtagccaggctcttcgtccctctctcctcttgtggctgtagtactctctcgtttacgctcttctcctgcgccctggcttagtgggttactggattgtggatttgtggtggtacgcctgtagaactgatatagttcagctcggtgcgacttagcatgagttgttgaaaagatcattgataatattgggatcaacactaacatggacattatgctcatcaaatgattgaattataaacttatcagctaggatagacaaagggaggctttcgagaatattgatctgaatatcagctttggatctagtatctgagagacagcaaagttcaggagtcctatagcttgtatgtatccagctaacagagtactgttgagagtggtgaccctctaatttgcaggttacagtccatagcaactgccaaattaaataactaaactattgtttacttcagaatgaaaattgatcagttgctgtttgtaaccaactataatgaatataagactcgctactcaggtttcatagaaataactgtctaactgatcttttaactatctcgatatcacaagatattaataaattgttcaacgactagttaattgcttctgagcgtgttttagtacacaaggtatcaggaataagcaggtgttgatattagtacttgataaatagtaaacacttccacttaaaaaaacatgaaatcgatgtattggtgaaacagtttacctaaggtactgcagtactgcactgttctgggtattgcaccaagagttttagaacgaagctcacagtacaaagtaaagtaacacaaatcaagtgtttccctttatgttgctactctactttgtgagatgataaagtaaagtagctaatggtttaattgctgatgtattagtattggttgtcgtccttgagttcatttttgggtgttaataatccatctagtttttagtagcataatccatcttttcttttgagaactcagttaaatctaaatctggtcaataatttgtttgatgtttgttttgaaatgttctctgtagagttcagataaggtcgtcacagaaattacagtcatatattatctgtatggttttacatagttctgaattactgagatgcaaagtccagtttcttgtttcatttgcatgaagctttgtttgagccaaatttcgaacatagctgcataacatggcacttatgcagggttgaataaacgcacgacatctgacggacttagggaagccttctcgaaattcggtcaggttattgaaggtatttgcttctaacatctgtagttcctccccgttgtactgctgctaattcttttcaagcaactaaaacacattgctatatgtgcagctagagtaatcactgatagaatatctggatactctcgaggatttggctttgtcaaatatgcaactgttgaagaagccggtgagggcataaaaggcatggatggaaaggtgagaaattctattaaccacctaggatgttctcggtaaaacctggtgtcaggaacatctatagtagagagttatgctctcatgaagtcaggaacacctgagattgttgctcatcatagcttgatctgctgctgacactaatgtatgttggtgtagttcctcgatggttgggtgatatttgccgagtacgccaagcagagagaagcacagcagccggcccaaccagcagcatcaactagttaccaatactccaaccaatgatagttgtctctacgatcaggattaccttctattggacaatattgttcgctattttaccatgtgaaaactgaaaatcactctccttgatatttcgtcagggagaaattttagtgtgcacggcatgaacatctccttagtaacttacggtgccgttttgtctgctactgtctgctgggtgactgtactctgtgagcttatgtaactatacaactgccttcatttttgagact</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0549800, RefSeq:Os07g0549800