Os07g0551500

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Revision as of 08:41, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0551500| Description = Similar to Cellulose synthase| Version = NM_001066479.2 GI:297607430 GeneID:4343551| Length = 6989 bp| Definition =...")
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Gene Name

Os07g0551500

Description

Similar to Cellulose synthase

Version

NM_001066479.2 GI:297607430 GeneID:4343551

Length

6989 bp

Definition

Oryza sativa Japonica Group Os07g0551500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:22561663..22568651

Sequence Coding Region

22561801..22563486

Expression

GEO Profiles:Os07g0551500

Genome Context

<gbrowseImage1> name=NC_008400:22561663..22568651 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:22561663..22568651 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttgagccatccgggtgaagagcctcagctcggcatgccggcgagctccggccaccctctggacttcagcgccgtcgacgtgcgcctcccgatactggtctacatcgcccgggagaagcggccgggatacgaccaccagaagaaggccggcgccatgaacgcgcagctgcgcgtatccgcgctgctgtcgaacgcgcccttcatcttcaacttcgacggcgaccactacatcaacaactcccaggcgttccgcgccgccctgtgcttcatgctcgactgccgccacggcgacgacaccgcattcgtccagttcccgcagcgcttcgacgacgtcgacccgaccgaccggtactgcaaccacaaccgcgtcttcttcgacgccacgctgctcggcctcaacggcgtccagggcccgtcctacgtcggcaccggctgcatgttccgccgcgtcgcgctctacggcgccgacccgccgcggtggaggccggaggacgacgacgccaaggcgctgggctgccccggcaggtatggaaactcgatgccgttcatcaacacgataccggcggcggcgagccaagaacggtccatcgcgtcgccggcggcggcgtcgctcgacgagacggcggccatggcggaggtggaggaggtgatgacgtgcgcgtacgaggacgggacggaatggggcgacggcgtcgggtgggtgtacgacatcgcgacggaggacgtggtgaccggcttccggctgcaccggaaggggtggcggtccatgtactgcgccatggagcccgacgcgttccgcggcacggcgccgatcaacctcacggagcgcctctaccagatcctgcggtggtcgggcggctcgctcgagatgttcttctcccgcaactgcccgctcctcgccggctgccggctgcgccccatgcagcgcgtcgcgtacgccaacatgacggcgtacccggtctcggcgctgttcatggtcgtctacgacctcctcccggtgatctggctctcccaccacggcgagttccacatccagaagccgttctcgacgtacgtcgcctacctcgtcgccgtcatcgccatgatcgaggtgatcggcctggtcgagatcaagtgggcggggctcaccctgctcgactggtggcgcaacgagcagttctacatgatcggcgccacgggggtgtacctggcggcggtgctgcacatcgtgctcaagaggctcctcggactgaagggcgtgcggttcaagctgacggcgaagcagctggccggcggcgcgagggagaggttcgcggagctgtacgacgtgcactggtcgccgctgctggcgccgacggtggtggtgatggcggtgaacgtgactgccatcggcgcggcggcggggaaggcggtcgtcggggggtggacgccggcgcaggtcgccggcgcgtcggcggggctggtgttcaacgtgtgggtcctggtgctgctctacccgttcgcgctcgggatcatggggaggtggagcaagaggccgtgcgcgctcttcgcgctgctcgtggccgcgtgcgcggcggtcgcggcggggttcgtcgccgtccatgccgtgctcgccgccggctccgccgcgccgtcctggttgggatggtctcgtggcgccactgccattttgccgtcaagctggcgacttaagcggggtttctga</cdnaseq>

Protein Sequence

<aaseq>MLSHPGEEPQLGMPASSGHPLDFSAVDVRLPILVYIAREKRPGY DHQKKAGAMNAQLRVSALLSNAPFIFNFDGDHYINNSQAFRAALCFMLDCRHGDDTAF VQFPQRFDDVDPTDRYCNHNRVFFDATLLGLNGVQGPSYVGTGCMFRRVALYGADPPR WRPEDDDAKALGCPGRYGNSMPFINTIPAAASQERSIASPAAASLDETAAMAEVEEVM TCAYEDGTEWGDGVGWVYDIATEDVVTGFRLHRKGWRSMYCAMEPDAFRGTAPINLTE RLYQILRWSGGSLEMFFSRNCPLLAGCRLRPMQRVAYANMTAYPVSALFMVVYDLLPV IWLSHHGEFHIQKPFSTYVAYLVAVIAMIEVIGLVEIKWAGLTLLDWWRNEQFYMIGA TGVYLAAVLHIVLKRLLGLKGVRFKLTAKQLAGGARERFAELYDVHWSPLLAPTVVVM AVNVTAIGAAAGKAVVGGWTPAQVAGASAGLVFNVWVLVLLYPFALGIMGRWSKRPCA LFALLVAACAAVAAGFVAVHAVLAAGSAAPSWLGWSRGATAILPSSWRLKRGF</aaseq>

Gene Sequence

<dnaseqindica>5166..6851#agtggctgctggataactgtggaggaggatcatatcaggcgacgatcgatggcgctttcgccggcggcggctggccgtaccggccgaaacaacaataacgacgccggcctcgcggaccctctgctgccggctggcggcggcggcggcggcggtaaggacaagtactgggtgcccgccgacgaggaggaagagatttgccgcggcgaggacggcggccgcccgccggcgccgccgctgctgtaccggacgttcaaggtcagcggcgtcctcctccatccctacaggtgtgtgtcaagctgtcagcttaagctaacttctcttcttcttctttccttcttgccgtcgtgcgcgtactcgagggtatgttgttgctaccgtgttagcatcgtcctgtcaaattttcccactactgctatgtgatggatagttgtatcaagtttcctgaatcttgtcacttgtggaacaccgatttttttccttcagttcatgcagaaattaggttgttctgtgaaatctctacaaaaatcatgtcaaattaattcttgccttatcaagatcacctaacagctgtgtgctggtagctcttagtgctagctagaattatcttttctacaaagtgattaatagaaaacaactaaaccaaacattataaaacgtgggaaaaaaagcagcgttaaaataacttgagtgggttgcagcaagccaagcgtggtagagccaaagtaactgcaaagtgccagcgttagtttgtgctctcctgtactcccctgaacactggtgtctcacgttcgttggaggaaagacaagtccaaaagtctgcacgcccacgtgaaaaggcccctctcgatgtcggcccgcatggggtacatgagtacatctaaacagtgggctgacatgcagtttgtgggccattagctcgacttgcactttattagcccaacagtaggctacagtcatccaagttctttttaccctctttcgttattccgaatccactgttttttttttttacactcaagatggtcatgatttctccagagtaattaaatttcgcaggattatatatatgttgaaaaaatcagtgtagacgaggattacaaaattttgagtacatatgcttcgataagagaatggattctaatctcgagctgaggggacagaggacttccctcgaggaatcaaatgagttttcttgcaaggtctcatattttcacttaaacttataactatcagctaaaatttaaatgttcaattttaaatgtggagataattttaagattttcctcatcgaagtttatttttccacctttgcttttatatcgttaagaacatgtatataaaagttctattcacaaattattatttttttataaataaagggaaaattggtcctataccatcgaaagttttcaagtttagttttgtaccatcgaaagtttacggtgcactttaatactattcaaagtttctaccgttactacttgtagcatttccgtccatatttcaatctctcacgtgaaatatgacaaatcctatcttactataaagttatcccccactaactccataaccttaacatgcaaaaataccacatcatcatccactaacaagatgccacatcatcatccactaacaatcatcacatttaaatatcatgcaaacatgctatatctttataatttttataatttaagagcttttcaaatataaacatgttatattatcatccaatataattcacataatattttaatgtatatctttattatgttttatgatatcctatatacttatatagttcatccttacttagttagtacttaaatgattaatctatggtccaaattatctttctcattttttcctctaattaagtcgtatcacatcaattgtttttagcctttagatgattaatctatggtccaaattatctccctacttttcttcttccataacgtcataccacattactttttactgttgaatcaccattctacaatttaagtataaattatcataaaccacattaatttacttaatctgatgttatctagctatattacacgttatttttttatcatactaaattccgacagcaatgcgcggggtttcaccttaccctatagaggcaaccagctccgcccgcagcaggcagctctttcgttgccttgcatctttcctggatctccgccatcacggaagtagcgccatgtccctcctgccgccgagctgctctgccttcctgccgagctcttccctctatctccgccttgctgccgagcttgtcctctctgccatgtatgtcccgccgcccgccaccaaacttgaacccggccaccgctcgccgtggtgtgattcggctcccgccggcgagccctctccgttgtccatctaatctcaacggcgacgacgagagattcgactgaagctcccctcctgagctccttttgtcagcgccggggtcaccggcaacattatctattctattagcaggttctccaatgatccaatcccctcagattaaaacgggctcggcggtgccgccgcgccggcgacaagatatttcagcttctcccccaccgataaccatgacgacaaggtccacaacgacggaacgacctcgctccagccacgattttctcccatctgaatgtacgcaaagatcgggctgattgaaacaacgagcaaaatcaatctgtttccctccacatatgggcctatggaaagagaacgagaaaaaagatcgtcccaggaaactgctatgtgaaagaagggtagtacagtcattttgtttggccttctctacggaaaattaaacagaaacgagaaaatctagacggaagtaaacggaagtggtagaaagagtaacggtggaaattttcaatggtattaaaatgcacctaaaactttcaatggtataaagctaaacttagaaacttgcgatgatatgaaacaaattttcccaaataaatagggaaaattggtttattccacaaataagccaatatctatgtaaagatttttacacgctaatcctaaccatgccctcgttcacttgtgacaggttactgaccttagtcaggctgatcgccgtcgtcctcttcctcgcatggcgcctgaagcaccgggactccgacgccatgtggctctggtggatctcgatcgccggcgacttctggttcggcgtcacctggctgctcaaccaggcctccaagctcaaccccgtcaagcgcgtccccgacctctccctcctcaggcggcgcttcgacgacggcggcctccccggcatcgacgtgttcatcaacaccgtcgaccccgtcgacgagccgatgctctacaccatgaactccatcctgtccatcctcgccaccgactaccccgccgaccggcacgccgcctacctctccgacgacggcgcgtcgctggcccactacgaggggctgatcgagacggcgaggttcgccgcgctgtgggtcccgttctgccggaagcaccgcgtcgagccgagggcgcccgagagctacttcgcggcgaaggcggcgccgtacgccgggccggcgctgccggaggagttcttcggcgaccgcaggctcgtgcgccgggagtacgaggagttcaaggcgcggctcgatgcgctgttcactgacattccgcaacgatcggaagcgagtgttggcaatgcaaacaccaaaggcgcgaaggccactctgatggcagatgggaccccttggccagggacatggaccgagccagcagagaatcacaaaaaaggacagcacgccggaatcgttaaggtaaaaaaaaaaaacctgttcagttcaaactttaactttattgacatgaatttaaactttaaactcatcttaacttacggagtaattcttatatattagttagatacaaatgttcacctctaacgtaaagttagagaaacataagtctctggtatataggatccacacgtcaaaaagacacatccccgtgatttaacttagggaagcccccatcgcaaatgctcggaagagacaccatcctagatgggtgccacctgtattctcaccaatcttgaagcactagaaaaaagtaaagtaatttggatttttttttcttagcgtataccctccgtattccagtggtgccctacgaacttgtatcgtattctctgccctaatcacgtcgttagcgttcctcgttcctcggagctgtaatccagctattcgcccttccgttccggctatcgccgcgcgtgtagttcgccgcccttccgccgtcgtcgtggctgtcgccgtcgctgtcgccgtcgccgtccagtggtcttttgcttggagccgaacgagctgctgggctgttgtccagttcccgtagattagattttgaagaagctgtgattcctaagtagatattgtactatcatatataaattagaaaacaataacatgaattattgtttctaatttgtaagctattgcaacctttatttcttcctgaaagcaatttgtagtgactcgatatactcaaacacgttatttctttctagtttatttttctttgaagcttcgtgtcttgtaaatgggccgccatgcattgttgatccatggttgatcaggggcctcggaggatcgtcaccaccggcggatgggcaagtggcagcaccggcgaatgcgccgccgtggggattcatctgcattgacggcgacggcgacgacgacagccacggcgacggcggaagggcggcgaactacacgcgcggcgatggccggaacggaagggcgaatagctggattacggctccgaggaacgaggaacgctaacgacgtgattagggcaaagaatacgatacaagttcgtagggcaccactggaatacggaggaatacggagggtatacgctaacaaaaaaaatccaaattgctttacttgtttctggtgcttcaagattggtgagaatagaggtggcacccatctaggatggtgcctcacgcgctgaggattggggctctgccccagagaatttttttcccaaatgctctgttcatggcatgcaaccaatttgcagtttcaatatgtttgtgaaagttttgattttgtaggtgcgcaaattttgcttatttcacacaagacatgacaaaaagaaatgtttgatgatgtatggtgattgaataggtaatgttgagccatccgggtgaagagcctcagctcggcatgccggcgagctccggccaccctctggacttcagcgccgtcgacgtgcgcctcccgatactggtctacatcgcccgggagaagcggccgggatacgaccaccagaagaaggccggcgccatgaacgcgcagctgcgcgtatccgcgctgctgtcgaacgcgcccttcatcttcaacttcgacggcgaccactacatcaacaactcccaggcgttccgcgccgccctgtgcttcatgctcgactgccgccacggcgacgacaccgcattcgtccagttcccgcagcgcttcgacgacgtcgacccgaccgaccggtactgcaaccacaaccgcgtcttcttcgacgccacgctgctcggcctcaacggcgtccagggcccgtcctacgtcggcaccggctgcatgttccgccgcgtcgcgctctacggcgccgacccgccgcggtggaggccggaggacgacgacgccaaggcgctgggctgccccggcaggtatggaaactcgatgccgttcatcaacacgataccggcggcggcgagccaagaacggtccatcgcgtcgccggcggcggcgtcgctcgacgagacggcggccatggcggaggtggaggaggtgatgacgtgcgcgtacgaggacgggacggaatggggcgacggcgtcgggtgggtgtacgacatcgcgacggaggacgtggtgaccggcttccggctgcaccggaaggggtggcggtccatgtactgcgccatggagcccgacgcgttccgcggcacggcgccgatcaacctcacggagcgcctctaccagatcctgcggtggtcgggcggctcgctcgagatgttcttctcccgcaactgcccgctcctcgccggctgccggctgcgccccatgcagcgcgtcgcgtacgccaacatgacggcgtacccggtctcggcgctgttcatggtcgtctacgacctcctcccggtgatctggctctcccaccacggcgagttccacatccagaagccgttctcgacgtacgtcgcctacctcgtcgccgtcatcgccatgatcgaggtgatcggcctggtcgagatcaagtgggcggggctcaccctgctcgactggtggcgcaacgagcagttctacatgatcggcgccacgggggtgtacctggcggcggtgctgcacatcgtgctcaagaggctcctcggactgaagggcgtgcggttcaagctgacggcgaagcagctggccggcggcgcgagggagaggttcgcggagctgtacgacgtgcactggtcgccgctgctggcgccgacggtggtggtgatggcggtgaacgtgactgccatcggcgcggcggcggggaaggcggtcgtcggggggtggacgccggcgcaggtcgccggcgcgtcggcggggctggtgttcaacgtgtgggtcctggtgctgctctacccgttcgcgctcgggatcatggggaggtggagcaagaggccgtgcgcgctcttcgcgctgctcgtggccgcgtgcgcggcggtcgcggcggggttcgtcgccgtccatgccgtgctcgccgccggctccgccgcgccgtcctggttgggatggtctcgtggcgccactgccattttgccgtcaagctggcgacttaagcggggtttctgattgatgcaatcggttgaaacttgaaagtattttggaatgcggatccctgtgagaatcctacagttctctgagaattttgctctgtttcaaaggggcttttgtcacaagtaattttggaatatagcaaacgttgatttc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0551500, RefSeq:Os07g0551500