Os07g0551700

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Revision as of 08:41, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0551700| Description = Similar to Cellulose synthase (Fragment)| Version = NM_001066480.1 GI:115472692 GeneID:4343552| Length = 5059 bp| D...")
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Gene Name

Os07g0551700

Description

Similar to Cellulose synthase (Fragment)

Version

NM_001066480.1 GI:115472692 GeneID:4343552

Length

5059 bp

Definition

Oryza sativa Japonica Group Os07g0551700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:22570384..22575442

Sequence Coding Region

22570545..22572188,22572337..22573075,22575003..22575280

Expression

GEO Profiles:Os07g0551700

Genome Context

<gbrowseImage1> name=NC_008400:22570384..22575442 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:22570384..22575442 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccaacggcggcggcggcggcgccggtggctgcagcaatggtggcggtggcggcgccgtgaacggcgcggcggcgaatggcggcggcggcggaggaggcggcagtaagggcgcgacgacgaggagggcgaaggtcagcccgatggacaggtactgggtgcccaccgacgagaaggagatggcggcggcggtcgccgacggcggcgaggacggccggcggccgctgctgttccggacgttcacggtcaggggcatcctcctccacccctacaggttattgacattggtcagattggttgctatcgtcctatttttcatatggcgtatcaggcacccgtacgccgatggcatgtttttctggtggatatctgtgattggagatttttggtttggtgttagttggctgctaaaccaagtggcaaagctgaaaccgatcaggcgtgttcccgatcttaacctcttacaacaacagtttgatcttcctgatggaaactccaacctccctggccttgatgtattcatcaacaccgtcgatcccataaatgagcctatgatatacactatgaacgccattttatccattcttgcagcagactacccagttgacaagcatgcttgctatctttcggatgatggtggatcgatcatccattatgatggtttacttgagactgcaaagtttgctgcgttatgggttcccttttgccgaaaacattccattgagcctagggcccctgagagctattttgcagtgaagtcacgtccatacgctggaagtgcaccagaggattttctcagtgaccacagatacatgcgtagggagtatgatgagttcaaggtacgcttagatgcgctttttactgtcattcccaaacggtcagatgcatacaaccaggcacatgccgaagaaggtgtgaaggcaacctggatggcagatgggacagagtggcctggtacatggattgatccatctgagaaccataagaaaggaaatcacgctggaattgttcaggttatgttgaaccatccgagcaatcaacctcaacttggtctaccagcaagcactgacagccctgtggacttcagcaatgttgatgtgcgccttcctatgcttgtatacatagcccgcgagaagcgcccaggctatgaccaccaaaagaaggcaggtgccatgaacgtgcagctgcgagtatctgccctcctcaccaatgcaccattcatcatcaactttgatggtgaccactatgtcaacaactcgaaggccttccgtgctggtatatgtttcatgctcgatcgacgtgaaggtgacaacactgcctttgtccaattcccccaacgttttgatgacgttgacccaactgataggtattgcaatcacaaccgagtcttctttgatgctactttgctcggcctcaatggtatccagggcccctcttatgttggcaccggttgcatgttccgccgagtcgcactgtatggtgttgacccacctcgttggagacccgatgatggcaatattgtggatagctccaaaaagttcggcaacttggactccttcatcagctcaatacctatagcagcaaaccaagaacgctcaatcatatcaccacctgcccttgaagagtctatcctgcaggagttgagtgatgccatggcatgtgcatatgaggatgggactgactggggcaaggatgttggttgggtttacaatattgcaaccgaggatgtggtgactggtttccgattgcatcggacagggtggcgctcaatgtactgccgcatggagcctgatgcattccgcggcactgcaccaatcaacctcactgagcgcctctaccagattctgcgctggtcaggtggctcccttgagatgttcttctcacataactgcccactccttgctggccgccgactcaactttatgcaacgaattgcttacattaacatgacaggctacccagttacatcagtcttccttttgttctatctcctcttccctgtcatatggatctttcgcggcatattctacatacagaagccatttcctacatatgtattgtaccttgtgatcgtcatatttatgtcagaaatgatcggtatggttgagatcaagtgggcggggctaacactactggactggatccgcaatgaacagttctacattattggagcaacagctgtttacccgcttgcagtcctgcacatagtgctgaagtgttttggtttgaagggtgtctcattcaagctgacagcaaaacaagtagcaagcagcaccagcgagaagtttgcagaactgtatgatgttcaatgggcaccattgttgttcccgacgatagtggtgatagcagtgaatatctgtgccattggcgcggcaataggcaaggctctctttggaggatggtcactgatgcagatgggagatgcgtcgctcgggctggtattcaacgtgtggatcctgctgctgatatatccatttgcactgggtatcatgggaagatggagcaagagaccctatatcctgttcgtcttgattgtgatttcatttgttataatcgcattggccgatattgccatccaggcaatgcgttctggatccgttcggctccactttagacggtcaggtggagccaacttccctacaagctgggggttttag</cdnaseq>

Protein Sequence

<aaseq>MAANGGGGGAGGCSNGGGGGAVNGAAANGGGGGGGGSKGATTRR AKVSPMDRYWVPTDEKEMAAAVADGGEDGRRPLLFRTFTVRGILLHPYRLLTLVRLVA IVLFFIWRIRHPYADGMFFWWISVIGDFWFGVSWLLNQVAKLKPIRRVPDLNLLQQQF DLPDGNSNLPGLDVFINTVDPINEPMIYTMNAILSILAADYPVDKHACYLSDDGGSII HYDGLLETAKFAALWVPFCRKHSIEPRAPESYFAVKSRPYAGSAPEDFLSDHRYMRRE YDEFKVRLDALFTVIPKRSDAYNQAHAEEGVKATWMADGTEWPGTWIDPSENHKKGNH AGIVQVMLNHPSNQPQLGLPASTDSPVDFSNVDVRLPMLVYIAREKRPGYDHQKKAGA MNVQLRVSALLTNAPFIINFDGDHYVNNSKAFRAGICFMLDRREGDNTAFVQFPQRFD DVDPTDRYCNHNRVFFDATLLGLNGIQGPSYVGTGCMFRRVALYGVDPPRWRPDDGNI VDSSKKFGNLDSFISSIPIAANQERSIISPPALEESILQELSDAMACAYEDGTDWGKD VGWVYNIATEDVVTGFRLHRTGWRSMYCRMEPDAFRGTAPINLTERLYQILRWSGGSL EMFFSHNCPLLAGRRLNFMQRIAYINMTGYPVTSVFLLFYLLFPVIWIFRGIFYIQKP FPTYVLYLVIVIFMSEMIGMVEIKWAGLTLLDWIRNEQFYIIGATAVYPLAVLHIVLK CFGLKGVSFKLTAKQVASSTSEKFAELYDVQWAPLLFPTIVVIAVNICAIGAAIGKAL FGGWSLMQMGDASLGLVFNVWILLLIYPFALGIMGRWSKRPYILFVLIVISFVIIALA DIAIQAMRSGSVRLHFRRSGGANFPTSWGF</aaseq>

Gene Sequence

<dnaseqindica>3255..4898#2368..3106#163..440#gccaagtttgatcacttctaaccgccgcgcccgcgcgcaccaggcacggccagtgacccagttgtacatatacccagcgcacactgcctcactagctcactcccactccgccatccactcccactactctaccatcgtgcgcgcgacgcgcgtgcgaaatcaatggcggccaacggcggcggcggcggcgccggtggctgcagcaatggtggcggtggcggcgccgtgaacggcgcggcggcgaatggcggcggcggcggaggaggcggcagtaagggcgcgacgacgaggagggcgaaggtcagcccgatggacaggtactgggtgcccaccgacgagaaggagatggcggcggcggtcgccgacggcggcgaggacggccggcggccgctgctgttccggacgttcacggtcaggggcatcctcctccacccctacaggtgcgaatttgcgatagtgcaagccgcacttgaggatcgtatctgatctttcctcatcatcattcaagtggcataatcgatcttcttccaagttttcaacttccatgttgaattactagctcactgctaaatttctatgggatcactcgctaatatattattagtagggagtagctatatatttatttatgataccatatttttttataaaagaaattagaccgttttacactacaaactaaaatcactataatttttttaagacttacactataattacatacattgcaagttttaatatttatattataattttctaatacacaatatataaaataattgagattaaaagtaatttattatctactgaaatgaggatatagaaaaagatagaagtatacttatgtattggagaaagagtcgcaaactagtagtggttccgtctttagtggctgcgtcatccagcaagtgagcgaacaagtgaacgcctcagtcagtcaggctgtgtttagatatggggtaaaaaaattttttttgcccgtgtcacatcgaatatatggacacatatttgaaaaattaaacgtagtctaataactaaacaaattatataatctatattatatgtaaactacgagacaaatttattaagtctaattaattcatcattagcaaatgtttattgtagcactacattgtcaaatcatggagcaattaggcttaaaagattcgtctcgcaatttacacgcaatatgtgtaattagtttttatatttgtctatatttaatactgcatgcatatgtccaaatattgaatatgacatgatgaaaaaattactagggatataaaaaggaccttagtcttgtggcttttttgtttttatttgtttccttacatatagaaaaataataattgaaactaatcaaaaaatattactagtaggtgcaaaagtgttcggtttgaaaatgaacgaaatgtgatggtgtaggattttcatcattacagagactgtgtgaacaggcgttttcagccggttgaaattagcttcggtttctcggtttccagctatatgttcagttttgtgatatgcgtccgttagttacaatgggaatctcatgggccacactaaccagcgtccaaactccaaatcattgagcccaacagcagcctctgccacgtgaaaaatgttggaccaaaataccctcttgggtcgacggcccatgggcctaaaacctaatgcactattcccggtaaggacggtcccacatgtcagtgcccgaggaggcaagtgggacccagctccactctcctcccctccccttcccaacactgtggcacaccgcacatgactcgccgatggcggcgactccgacggctgcgctagcgccggtgacgagcggcgtaactctacgtaggggccgcgcgtgtctccactcctccaccttttcgctcccagatcccagcccttgccgccgtgcagtctagttggcggctatgcccttccggcctcccgtgcttcgctgtcctacgacccctgtaccgtgtgcccgcgcagctcgccgaagggtccaacccacggcgtcgaagccgaatggtattagctgaggtcccagcaagctcttagccctgtcgtcttctcactgcatccgagataggtttgactagtggactcattttttcttttgaacgtgcaatgctatgaattgttggttgtggctggtagttgaaatgcatgtgcatttgaattgacaggtttaaaattaaatatgcgatgttttcagttactaaattcgaagtgtattaggcatggacacggtgtattagtttcatctaaaaaatacaatgctaatgttcaaggcttttattctcttgtgccaactttgcagattttgagtattctaaccattttttttccatttctttgcaacaggttattgacattggtcagattggttgctatcgtcctatttttcatatggcgtatcaggcacccgtacgccgatggcatgtttttctggtggatatctgtgattggagatttttggtttggtgttagttggctgctaaaccaagtggcaaagctgaaaccgatcaggcgtgttcccgatcttaacctcttacaacaacagtttgatcttcctgatggaaactccaacctccctggccttgatgtattcatcaacaccgtcgatcccataaatgagcctatgatatacactatgaacgccattttatccattcttgcagcagactacccagttgacaagcatgcttgctatctttcggatgatggtggatcgatcatccattatgatggtttacttgagactgcaaagtttgctgcgttatgggttcccttttgccgaaaacattccattgagcctagggcccctgagagctattttgcagtgaagtcacgtccatacgctggaagtgcaccagaggattttctcagtgaccacagatacatgcgtagggagtatgatgagttcaaggtacgcttagatgcgctttttactgtcattcccaaacggtcagatgcatacaaccaggcacatgccgaagaaggtgtgaaggcaacctggatggcagatgggacagagtggcctggtacatggattgatccatctgagaaccataagaaaggaaatcacgctggaattgttcaggtattttcacttgcttatactattacctttttcttaattagctttcagtaattccaacatatattgactagagtagtatatgagttagagttacctaataagttagagtgcaatgatatatttttcaactaccatggttgttcaataggttatgttgaaccatccgagcaatcaacctcaacttggtctaccagcaagcactgacagccctgtggacttcagcaatgttgatgtgcgccttcctatgcttgtatacatagcccgcgagaagcgcccaggctatgaccaccaaaagaaggcaggtgccatgaacgtgcagctgcgagtatctgccctcctcaccaatgcaccattcatcatcaactttgatggtgaccactatgtcaacaactcgaaggccttccgtgctggtatatgtttcatgctcgatcgacgtgaaggtgacaacactgcctttgtccaattcccccaacgttttgatgacgttgacccaactgataggtattgcaatcacaaccgagtcttctttgatgctactttgctcggcctcaatggtatccagggcccctcttatgttggcaccggttgcatgttccgccgagtcgcactgtatggtgttgacccacctcgttggagacccgatgatggcaatattgtggatagctccaaaaagttcggcaacttggactccttcatcagctcaatacctatagcagcaaaccaagaacgctcaatcatatcaccacctgcccttgaagagtctatcctgcaggagttgagtgatgccatggcatgtgcatatgaggatgggactgactggggcaaggatgttggttgggtttacaatattgcaaccgaggatgtggtgactggtttccgattgcatcggacagggtggcgctcaatgtactgccgcatggagcctgatgcattccgcggcactgcaccaatcaacctcactgagcgcctctaccagattctgcgctggtcaggtggctcccttgagatgttcttctcacataactgcccactccttgctggccgccgactcaactttatgcaacgaattgcttacattaacatgacaggctacccagttacatcagtcttccttttgttctatctcctcttccctgtcatatggatctttcgcggcatattctacatacagaagccatttcctacatatgtattgtaccttgtgatcgtcatatttatgtcagaaatgatcggtatggttgagatcaagtgggcggggctaacactactggactggatccgcaatgaacagttctacattattggagcaacagctgtttacccgcttgcagtcctgcacatagtgctgaagtgttttggtttgaagggtgtctcattcaagctgacagcaaaacaagtagcaagcagcaccagcgagaagtttgcagaactgtatgatgttcaatgggcaccattgttgttcccgacgatagtggtgatagcagtgaatatctgtgccattggcgcggcaataggcaaggctctctttggaggatggtcactgatgcagatgggagatgcgtcgctcgggctggtattcaacgtgtggatcctgctgctgatatatccatttgcactgggtatcatgggaagatggagcaagagaccctatatcctgttcgtcttgattgtgatttcatttgttataatcgcattggccgatattgccatccaggcaatgcgttctggatccgttcggctccactttagacggtcaggtggagccaacttccctacaagctgggggttttaggattaatttgtatctccaatgttagctggtatttgtttttcccttgttgagttttttttttttttgttgattctcaggttttactttacatgctgtgcatagcatagtacatgtacagaactacagattcgttcaataaatgaaagattagccatttgtct</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0551700, RefSeq:Os07g0551700