Os09g0471100

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Revision as of 07:28, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0471100| Description = Similar to Peroxidase 17 precursor (EC 1.11.1.7) (Atperox P17) (ATP25a)| Version = NM_001069974.1 GI:115479690 GeneID...")
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Gene Name

Os09g0471100

Description

Similar to Peroxidase 17 precursor (EC 1.11.1.7) (Atperox P17) (ATP25a)

Version

NM_001069974.1 GI:115479690 GeneID:4347336

Length

3075 bp

Definition

Oryza sativa Japonica Group Os09g0471100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:18586448..18589522

Sequence Coding Region

18586633..18587268,18588735..18588926,18589123..18589377

Expression

GEO Profiles:Os09g0471100

Genome Context

<gbrowseImage1> name=NC_008402:18586448..18589522 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:18586448..18589522 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgctcctcctcctccgacgcggcggcggcttcgctgcggccacggtcctcgcggtcgtcgtcgtcgcgctcgtcctctcctgcggtggtggcgcggaggcggccgtgagggacctcagggtcgggtactacgccgagacgtgccccgacgccgaggccgtcgtccgcgacaccatggcccgggcacgcgcgcacgaggcccgcagcgtcgcgtccgtcatgcgcctccagttccacgactgcttcgtcaacgggtgcgacgggtcggtgctgatggacgcaacgccgacgatggcgggggagaaggaggcgctctccaacatcaactcgctccgctccttcgacgtcgtcgacgagatcaaggaggcgctggaggagcgctgccctggcgtcgtctcctgcgccgacatcatcgtcatggccgcccgcgacgccgtcgccctgacaggtgggcccttctgggacgtgaggcttgggcgcgaggacagcctgacggcgagccaggaggactcggacaacatcatgccgagcccacgcgccaacgccaccaccctcatcaagctcttcgccggctacaacctcaccgtcaccgacctcgtcgcgctctccggctcgcactccatcggcgaggcccgctgcttctccatcgtcttccgcctctacaaccagtccggctccggcaggcccgaccccaacatggaccccgcctaccgcgcggggctcgactcgctctgcccccgcggcggcgacgagaacgtcaccggaggcatggacgccaccccgctcgtcttcgacaaccagtacttcaaggacctcgtccgcctccgcggcttcctcaactccgaccagacgctcttctccgacaacgccgggacccggctcgccgtgaggaaattcggcgaggaccagggcgccttcttcagggccttcgtcgaagggatgatcaagatgggggagctgcagaaccccaggaagggagagatacgacgcaactgccgtgtcgccaatgccccggcgccgccgcctgtggaggcggaggtggcggcgacgtccaaggcggtggtcctggtggacttctga</cdnaseq>

Protein Sequence

<aaseq>MALLLLRRGGGFAAATVLAVVVVALVLSCGGGAEAAVRDLRVGY YAETCPDAEAVVRDTMARARAHEARSVASVMRLQFHDCFVNGCDGSVLMDATPTMAGE KEALSNINSLRSFDVVDEIKEALEERCPGVVSCADIIVMAARDAVALTGGPFWDVRLG REDSLTASQEDSDNIMPSPRANATTLIKLFAGYNLTVTDLVALSGSHSIGEARCFSIV FRLYNQSGSGRPDPNMDPAYRAGLDSLCPRGGDENVTGGMDATPLVFDNQYFKDLVRL RGFLNSDQTLFSDNAGTRLAVRKFGEDQGAFFRAFVEGMIKMGELQNPRKGEIRRNCR VANAPAPPPVEAEVAATSKAVVLVDF</aaseq>

Gene Sequence

<dnaseqindica>2255..2890#597..788#146..400#gtacagagcagagcacagcagaggagatcgagcagagacagacagacccgcaggcggaagcggaggcagggcaggcaggcagcagcaacaatcccccacctgcgcgtgtgcgtgtctgtttcggtgcttcctcctcctcctcgccatggcgctcctcctcctccgacgcggcggcggcttcgctgcggccacggtcctcgcggtcgtcgtcgtcgcgctcgtcctctcctgcggtggtggcgcggaggcggccgtgagggacctcagggtcgggtactacgccgagacgtgccccgacgccgaggccgtcgtccgcgacaccatggcccgggcacgcgcgcacgaggcccgcagcgtcgcgtccgtcatgcgcctccagttccacgactgcttcgtcaacgtacgtcctcgtatcggtgatgcgattcgaattcttccgtttctcctcctccgccgtgccgcgaaccgatctgccctctcgcggtcactcttcgtgggtttctgtgtgtgtgtgtgtgtgtgttttgtttttgtttggtttttctctccatctgatcgggcgatctgccgtgatttggttcgtcgtgttcgagcaggggtgcgacgggtcggtgctgatggacgcaacgccgacgatggcgggggagaaggaggcgctctccaacatcaactcgctccgctccttcgacgtcgtcgacgagatcaaggaggcgctggaggagcgctgccctggcgtcgtctcctgcgccgacatcatcgtcatggccgcccgcgacgccgtcgccctggtacgtacacacaccccctcccgccccgccccgccgcgtccacgcccactctagtagtagtactagtagtactacgtttctcttccattttcctcgcgtttccgtgcaaaatccgctgctccgcctctgcctctccccaacccggcatttccctcctctcaggaggcacccagcctcccccaggcaaaagacaaggaagaaaagtgccaaatatctcgatcgttttttgtcatggctggctgcccgctgtgcgatgcaacgcctatgcgtaacgaacaaaaagttagttcatctcttcgctgcatggttggtcacccccaacccaggtggcacaacacagccctgacctcgttgacgaaccaacgagcgattgagaatcgcctcgcctgggagtaaaatccggcggttggcgctctcgtcatcgtgcgtacggtggccgtagtcacgtgtgtgtcacatgccgtttcatatgaacttgaaatttggattactccgcatgaattccattcggaatcatccaaaacaaaggcgtgtgtgcgtgtgtttgaaaatcatagggactgacgaaaatctccgaaagaatcagtgacccgaattgtcaaaaccatctttcgttttcctctcccttatcctttcatgtgcactatagtcctatgcccctgatagggacggtacagtgcatgtacccgtgctccctgtaaccaccacactgaacatcaagcgggggcaaggttgcatgaaccgtcccctcggcgtgcacaagacaagcgcgtttgacgtagccgccgtgcagcgagccgggaaaggccggacggtgggggagctaggggccatggctacgtacgtgaagccgaacggccggagctgcagttgtatagtcctttttagacttttccgtgcaggcgatcgtgtactgtgtcggggtgctgtcaaaacttgtccttgttgatggctcatcgccgaggggaggaggaggacctaggacggagacaaagcagcattgctttcgcagtgggtcacgctgccgatttgtcactatgctagattgctagctagccatgttctttttgagttttacacttttcacgcggttgacatggagccgagtatgatttatccttccgttgcattttcattttctgacatttgataacgtaaacagcggctcttaactgtactagtaactgaactgttctgtcatgagtgggccgtactaatttggatgtaagcaaaacacataatgctcttattgtcattacgatcttgggttgaatttgctgttttgcatgcaaatgtacaaatgtagatacaaataaatgatcatacgttgcaatcaatatccatgtctgcacaatgctgtaacattggaagatttgggttgttaatttccaggttcgtttggctggtcagtgaaattattgacttgatttgactctctctcctcctttcttgtgtctgtatcacagacaggtgggcccttctgggacgtgaggcttgggcgcgaggacagcctgacggcgagccaggaggactcggacaacatcatgccgagcccacgcgccaacgccaccaccctcatcaagctcttcgccggctacaacctcaccgtcaccgacctcgtcgcgctctccggctcgcactccatcggcgaggcccgctgcttctccatcgtcttccgcctctacaaccagtccggctccggcaggcccgaccccaacatggaccccgcctaccgcgcggggctcgactcgctctgcccccgcggcggcgacgagaacgtcaccggaggcatggacgccaccccgctcgtcttcgacaaccagtacttcaaggacctcgtccgcctccgcggcttcctcaactccgaccagacgctcttctccgacaacgccgggacccggctcgccgtgaggaaattcggcgaggaccagggcgccttcttcagggccttcgtcgaagggatgatcaagatgggggagctgcagaaccccaggaagggagagatacgacgcaactgccgtgtcgccaatgccccggcgccgccgcctgtggaggcggaggtggcggcgacgtccaaggcggtggtcctggtggacttctgacgaacgagctgctagtcccctgactccccagctgttggtgttcgagaggagctgctcagatatgagagtgttgtggctattcatatatgagtttttggtccgatggcaggtttgcacctacctgtaagcttgtgatttcagggttacccgcttattgccgattattgaatggtgataaataactg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0471100, RefSeq:Os09g0471100