BGIOSGA014490

From RiceWiki
Revision as of 15:56, 22 July 2012 by 124.16.129.48 (talk)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA014490

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014490, complete gene.

LocusTag

OS04G0582900

Ensembl Transcript ID

BGIOSGA014490-TA

Ensembl Protein ID

BGIOSGA014490-PA

Length

4955

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28254496..28259450

Sequence Coding Region

28259379..28259450,28258536..28259295,28257942..28258117,28257372..28257881,28256449..28257283
,28254904..28255153,28254496..28254760

Genome Context

<gbrowseImage1> name=IndicaChromosome04:28254496..28259450 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:28254496..28259450 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTAGATTACGATTACGCGCGTCAAGATCAATCCTCCCCTGGTCATGGCCGTGGCCCGGCTTCGCACTAACCACTTCGTTGGCGGGATCGTCGTCTTTTCACCGGGCGAATGGTGGCACCGACGAGATAACCAGTAGGCTGCCTGCGTTCGGGCTGAACGACTCGCAGGCCGGTGCGATACAGAGCTGCGTCTCGGCGGTGCAGGGCAACGGCGCGAGCACCACCAGCGGCCGGTTCAGCCTCATCTGGGGGCCTCCCGGCACGGGCAAAACCAAGACCATCAGCGTGCTGCTGCTGATGCTGATGACGACGGCGACGAGCCAGAGCAGATACCGTGTCCTGACGTGCGCGCCGACCAACACCGCGATCAGCCAGGTCGCGTCACGGCTCCTTGCTCTGAGCAAGCAGCATTCCGCCGCTGCCGCCGGCGGACTGTGCCACGGCGACCTTCTGCTGTTTGGCAACAAGGACAGGATGGGCATTGACGGTGATCTGAAGGAGGTCTTCCTGGACAATCGTGTTAAGATTCTCCAGAAGTGTTTCTCGCCGGAGTCGGGTTGGAGGCATGGCCTGAGTTCATTACAAGTTTTTCTGAGCTTTCCGTTAGCTCTCAGATGTCAGTACATCCAAGCCTGCATTGCATTAAAAGATGGGACAGCATTACCGGAGTCGTCATTTGTCAGGTCAAGGTTTCATGACATTTGCCAGAAGCTTAGCAGATGTTTTCAGACAATCTTGTCTCACGTCCCCAAGTCTGTGATTCTTGAGAAAAATTACAACAACATTATTTTGCTCACAACGATGCTGGAGAACTTCAGAAAGTTGCTTACCCGATCGTCCCCGGAGATGGTGAAGAAAGGTGGTAGAGCCAGGGAGGGGAACAAGAAACCGGACGACGACGATCTCGTCAACACCATCTTCTCCTGGACCCTGGAAGATGTCATGAACCAGAACCTCTTCGCCGACAAGGTTCCATCCATTTCGTTCGTCTTTTCAATTCGTTTGGTGAACGCCATACCTGACAGGTTCTCCGGTCTGAAGAGCTACCTGGATTCGTTCAGGGCCCTGTTGCTGGAAGAGATACGAGCGGAGATGAGCTCTAACCTGGAGACGTTGCCGAACAACAGCTCGTCGACCAAACACATACAATCCCTAGTTCGTGTACCTACGGGCTTGCGACAATGCCCGCTGTATCGCGTCACCATTTCCGACCAACGTGGAGCTTGCGCTCCATGCATCGGTGACATCGTCGTGCTCACGGATACCGTGCCGCGACGGCCGTCCGACCTCGCGAGCAACGGCCGCTCCTGCTGCCTCGCACACGTCAAGGATGTCGTCAACAGACGTACCTTCCTTATCAGAGCGGCCAAGAAAATAGGAGATGCAGACTCGTATGCTTTCGCCGCTAGTTTGCTCGCCTTTATACCCTACGCCCGCATCTGGCGATGTCTTGACTACGATTACGCGCTCAAGATAAATCCTCCCCTTGTCATGGCCGTCGCCGGCGTCGCACTAACCACTTCGTTGGCGGGATCGTCGTCTTTTCACCGGGCGAATGGTGGCACCGACGAGATAACCAGTAGGCTGCCTGCGTTCGGGCTGAACGACTCGCAGGCCGGTGCGATACAGAGCTGCGTCTCGGCGGTGCAGGGCAACGGCGCGAGCACCACCAGCGGCCGGTTCAGCCTCATCTGGGGGCCTCCCGGCACGGGCAAAACCAAGACCATCAGCGTGCTGCTGCTGATGCTGATGACGACGGCGACGAGCCAGAGCAGATACCGTGTCCTGACGTGCGCGCCGACCAACACCGCGATCAGCCAGGTCGCGTCACGGCTCCTTGCTCTGAGCAAGCAGCATTCCGCCGCTGCCGCCGGCGGACTGTGCCACGGCGACCTTCTGCTGTTTGGCAACAAGGACAGGATGGGCATTGACGGTGATCTGAAGGAGGTCTTCCTGGACAATCGTGTTAAGATTCTCCAGAAGTGTTTCTCGCCGGAGTCGGGTTGGAGGCATGGCCTGAGTTCATTACAAGTTTTTCTGAGCTTTCCGTTAGCTCTCAGATGTCAGTACATCCAAGCCTGCATTGCATTAAAAGATGGGACAGCATTACCGGAGTCGTCATTTGTCAGGTCAAGGTTTCATGACATTTGCCAGAAGCTTAGCAGATGTTTTCAGACAATCTTGTCTCACGTCCCCAAGTCTGTGATTCTTGAGAAAAATTACAACAACATTATTTTGCTCACAACGATGCTGGAGAACTTCAGAAAGTTGCTTAGTAAGAATAGTGCAGCAGGGGATGAAGTGCTCGTTGGCATCTTTATGAAAGAAAAGAAGCCTGATGGTTCAGATGCTTGCGTCGGTACAGGGGAAGGGGTTAGCGTAGGCATCATATGCCCGTATGCCGCCCAGGTGGAGGCGATCCAGAGCGGGATAGATGCGAACGCTCTTCGCCCGCTAGACGTGCGCGTCAACTCCGTCGACGGTTTCCAAGGCAGCGAGGAGGACATCATCATCCTGTCCACCGTCAGGTCCAACAGTACAGGATCCATCGGTTTCCTCTCCAACCGTCGCCGCGCCAACGTCGCCCTGACAAGGGCAAGGCATTGCCTCTGGATCCTGGGCGACGCGGCGACGTTGCTCGGCAGCGGCTCCGTCTGGGGGGAGCTGGTCCGGGACGCCGTGGATCGCCGGTGCTTCTACGACTGGGACGACGGCGGCGCTGGTTTGCTCGGCGTTGCTCGGCGCGGACACGAGGACGAGCTGGACGATGCGGTCGAGTTCGCTACGGCGTTTGACACGTTCGCAGACGAAGCGGGGTGCAGAGACGATATCTGCGACGCGCTAGGCTCCCTGAAACTAGCTTAG</cdnaseq>

Protein Sequence

<aaseq>MSRLRLRASRSILPWSWPWPGFALTTSLAGSSSFHRANGGTDEITSRLPAFGLNDSQAGAIQSCVSAVQGNGASTTSGRFSLIWGPPGTGKTKTISVLLLMLMTTATSQSRYRVLTCAPTNTAISQVASRLLALSKQHSAAAAGGLCHGDLLLFGNKDRMGIDGDLKEVFLDNRVKILQKCFSPESGWRHGLSSLQVFLSFPLALRCQYIQACIALKDGTALPESSFVRSRFHDICQKLSRCFQTILSHVPKSVILEKNYNNIILLTTMLENFRKLLTRSSPEMVKKGGRAREGNKKPDDDDLVNTIFSWTLEDVMNQNLFADKVPSISFVFSIRLVNAIPDRFSGLKSYLDSFRALLLEEIRAEMSSNLETLPNNSSSTKHIQSLVRVPTGLRQCPLYRVTISDQRGACAPCIGDIVVLTDTVPRRPSDLASNGRSCCLAHVKDVVNRRTFLIRAAKKIGDADSYAFAASLLAFIPYARIWRCLDYDYALKINPPLVMAVAGVALTTSLAGSSSFHRANGGTDEITSRLPAFGLNDSQAGAIQSCVSAVQGNGASTTSGRFSLIWGPPGTGKTKTISVLLLMLMTTATSQSRYRVLTCAPTNTAISQVASRLLALSKQHSAAAAGGLCHGDLLLFGNKDRMGIDGDLKEVFLDNRVKILQKCFSPESGWRHGLSSLQVFLSFPLALRCQYIQACIALKDGTALPESSFVRSRFHDICQKLSRCFQTILSHVPKSVILEKNYNNIILLTTMLENFRKLLSKNSAAGDEVLVGIFMKEKKPDGSDACVGTGEGVSVGIICPYAAQVEAIQSGIDANALRPLDVRVNSVDGFQGSEEDIIILSTVRSNSTGSIGFLSNRRRANVALTRARHCLWILGDAATLLGSGSVWGELVRDAVDRRCFYDWDDGGAGLLGVARRGHEDELDDAVEFATAFDTFADEAGCRDDICDALGSLKLA</aaseq>

Gene Sequence

<dnaseqindica>1..72#156..915#1334..1509#1570..2079#2168..3002#4298..4547#4691..4955#ATGTCTAGATTACGATTACGCGCGTCAAGATCAATCCTCCCCTGGTCATGGCCGTGGCCCGGCTTCGCACTAGTAAGTGACGTGTCAGGTTCTGTACATTACTGCATCAGCTAGCTAGATTTCTCACCTGAGTGATTGACCCTCTTGATCAGCAGACCACTTCGTTGGCGGGATCGTCGTCTTTTCACCGGGCGAATGGTGGCACCGACGAGATAACCAGTAGGCTGCCTGCGTTCGGGCTGAACGACTCGCAGGCCGGTGCGATACAGAGCTGCGTCTCGGCGGTGCAGGGCAACGGCGCGAGCACCACCAGCGGCCGGTTCAGCCTCATCTGGGGGCCTCCCGGCACGGGCAAAACCAAGACCATCAGCGTGCTGCTGCTGATGCTGATGACGACGGCGACGAGCCAGAGCAGATACCGTGTCCTGACGTGCGCGCCGACCAACACCGCGATCAGCCAGGTCGCGTCACGGCTCCTTGCTCTGAGCAAGCAGCATTCCGCCGCTGCCGCCGGCGGACTGTGCCACGGCGACCTTCTGCTGTTTGGCAACAAGGACAGGATGGGCATTGACGGTGATCTGAAGGAGGTCTTCCTGGACAATCGTGTTAAGATTCTCCAGAAGTGTTTCTCGCCGGAGTCGGGTTGGAGGCATGGCCTGAGTTCATTACAAGTTTTTCTGAGCTTTCCGTTAGCTCTCAGATGTCAGTACATCCAAGCCTGCATTGCATTAAAAGATGGGACAGCATTACCGGAGTCGTCATTTGTCAGGTCAAGGTTTCATGACATTTGCCAGAAGCTTAGCAGATGTTTTCAGACAATCTTGTCTCACGTCCCCAAGTCTGTGATTCTTGAGAAAAATTACAACAACATTATTTTGCTCACAACGATGCTGGAGAACTTCAGAAAGTTGCTTAGTAAGAATAGTGCAGCAGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGACACCAAGTCCGACGCGTCACAGCAACACAGCATGCTTGGAGAAACACAACCGAACGGCCGGCCGCCTCCTCGTCGTCGGCGCGCGAAACCACAGGATATCTCGTGCACCGTTCCGTATCCTAGGCAGGCAATCCGACGCCACCCACACGATGCGCGTCTGCGAGACGAGCCCGTATGCATTCAGATTTCTGCATGGGGAAACGATAGAGCCGAGACAGCAGCGAGCACCATTTACTGCAGCTCTATACCAAGTTCAGACTTCAGAACCTGCAGAATAAAAGGAAGAAGCGCCATCTCCCGCTAGCATCGCGAGCAGCCAAGCATCCAGCCGGCCGGTGTTTAGCCCGATCGTCCCCGGAGATGGTGAAGAAAGGTGGTAGAGCCAGGGAGGGGAACAAGAAACCGGACGACGACGATCTCGTCAACACCATCTTCTCCTGGACCCTGGAAGATGTCATGAACCAGAACCTCTTCGCCGACAAGGTTCCATCCATTTCGTTCGTCTTTTCAATTCGTTTGGTACGTACCTGATCTGAACATGCATGAGCAATGGACATATGAACTCGCATACTTTTGCAGGTGAACGCCATACCTGACAGGTTCTCCGGTCTGAAGAGCTACCTGGATTCGTTCAGGGCCCTGTTGCTGGAAGAGATACGAGCGGAGATGAGCTCTAACCTGGAGACGTTGCCGAACAACAGCTCGTCGACCAAACACATACAATCCCTAGTTCGTGTACCTACGGGCTTGCGACAATGCCCGCTGTATCGCGTCACCATTTCCGACCAACGTGGAGCTTGCGCTCCATGCATCGGTGACATCGTCGTGCTCACGGATACCGTGCCGCGACGGCCGTCCGACCTCGCGAGCAACGGCCGCTCCTGCTGCCTCGCACACGTCAAGGATGTCGTCAACAGACGTACCTTCCTTATCAGAGCGGCCAAGAAAATAGGAGATGCAGACTCGTATGCTTTCGCCGCTAGTTTGCTCGCCTTTATACCCTACGCCCGCATCTGGCGATGTCTTGACTACGATTACGCGCTCAAGATAAATCCTCCCCTTGTCATGGCCGTCGCCGGCGTCGCACTAGTAAGTGAACGTGTCAGTGTTCTGGTACATTTACTGCATCAGCTAGCTAGAATTTCTCACCTGAGTGATTGACCCTCTTGATCAGCAGACCACTTCGTTGGCGGGATCGTCGTCTTTTCACCGGGCGAATGGTGGCACCGACGAGATAACCAGTAGGCTGCCTGCGTTCGGGCTGAACGACTCGCAGGCCGGTGCGATACAGAGCTGCGTCTCGGCGGTGCAGGGCAACGGCGCGAGCACCACCAGCGGCCGGTTCAGCCTCATCTGGGGGCCTCCCGGCACGGGCAAAACCAAGACCATCAGCGTGCTGCTGCTGATGCTGATGACGACGGCGACGAGCCAGAGCAGATACCGTGTCCTGACGTGCGCGCCGACCAACACCGCGATCAGCCAGGTCGCGTCACGGCTCCTTGCTCTGAGCAAGCAGCATTCCGCCGCTGCCGCCGGCGGACTGTGCCACGGCGACCTTCTGCTGTTTGGCAACAAGGACAGGATGGGCATTGACGGTGATCTGAAGGAGGTCTTCCTGGACAATCGTGTTAAGATTCTCCAGAAGTGTTTCTCGCCGGAGTCGGGTTGGAGGCATGGCCTGAGTTCATTACAAGTTTTTCTGAGCTTTCCGTTAGCTCTCAGATGTCAGTACATCCAAGCCTGCATTGCATTAAAAGATGGGACAGCATTACCGGAGTCGTCATTTGTCAGGTCAAGGTTTCATGACATTTGCCAGAAGCTTAGCAGATGTTTTCAGACAATCTTGTCTCACGTCCCCAAGTCTGTGATTCTTGAGAAAAATTACAACAACATTATTTTGCTCACAACGATGCTGGAGAACTTCAGAAAGTTGCTTAGTAAGAATAGTGCAGCAGGGGATGAAGTGCTCGTTGGCATCTTTATGAAAGAAAAGAAGCCTGATGGTTCAGATGGTGGAGTGGTACATTCAGATTTGGTTCGAAATCTTCGGCAGAGCATGACACAAATTCTTGGCGTCATCAGTACTCTTCTGCGAGGGTTGCAGCTTCCTGCAACAACCTCTCCTTTCAAGATCAAGAAATTCTGCCTACGAAGTGCCTCTCTTATTTTCTGCACCGTATCGGGCTCTGCAAAGCTGTACGAGCAGAAAATGGATTTGCTTCTCATCGACGAGGCAGCACAGTTGAAGGAATGCGAATCCCTCATCCCGTTGCAAGTCTCTGGCTTGAAGCATGCTGTTCTTATTGGCGATGAGTGCCAACTGCCTGCTACTGTGAAAAGCAAGGTCCATTCAGTTCTCCTAAAATTTCTTTGCCCTTTTGTTCATGAACTGCTACTACTTTCTTGCGGGCTGCACATATGTTTGTACCATTGTACTCCTGTATGTAGGTTGCTTATATTCATCTTGAGTAATCTTATTTCTTGCAGGCTGCAGATGGTGCCTTACTGGGAAGGAGCCTGTTTGAAAGGTTAACTCTACTGGGACACCAGAAGCACCTTCTGAACATGCAGTACAGGATGCACCCTTCCATTAGCATCTTCCCAAACTTCAGTTTCTACGACAAGAAAATCCTGGATGGGCCGAATGTCACACACGCGAGGCACGAGCGTAGCTTCCTTCAAGGGGCCATGTTTGGGCCGTATTCCTTTATCAACATTGAGAATGGTAGAGAGGATCCTGGCCGCAGCAAGAGAAACATGGCAGAGGTGGCTGCCATCAAGAAAATACTGCATAATCTACGCAAAGGTAACTATCCCCTGTTACTACTCTTGATCCTTGTATCCCTGTATGTTGGTTAACTATTTCGGAATGCAAAGCCATTTCAGGACCGAAATTTCGAAAAATTTCAAACTATATTATAAAATCTGAACAATATTTAGCTACATTTGAGCAGAATTTGCTAGATAAAAAAAATCGGATATAAGTACATCGTATCGTAACTCCATAAACCTTACACCGCATCTTGTATAGTGCATAGTATAGCTTGGTTTTCTTCTTTTCTTTAGCCCTAGGGGTTATAAACCTTACATTCATGTGCTGCTTTCCCTTAAAAAAAACCCTTGAATTTCAATATTCGGTTTTGATATTTCAATATTCAGTTTGATGCTAATTTTTCTCAGACTAGTATAGACTCTACCTTAAATTTAGTGGTGGTAACAAATATGGGTTGGGCAAGTTTTGTCTCCAATCCAAACTACTACTAGTGGCCTGTAAGTTTTGTTTCAAAATACTTTTTCCACCGTGTAGCTTGCGTCGGTACAGGGGAAGGGGTTAGCGTAGGCATCATATGCCCGTATGCCGCCCAGGTGGAGGCGATCCAGAGCGGGATAGATGCGAACGCTCTTCGCCCGCTAGACGTGCGCGTCAACTCCGTCGACGGTTTCCAAGGCAGCGAGGAGGACATCATCATCCTGTCCACCGTCAGGTCCAACAGTACAGGATCCATCGGTTTCCTCTCCAACCGTCGCCGCGCCAACGTCGCCCTGACAAGGGCAAGGTACGCAACGCACAGTCGCACACACGCCTGAATGTTTTCCGGATCAAAGTATGAACGCCAACGCGCCCTCTCATGAACTCGTCGTTGGCATCCGTCCATCCATGGCGGTGTCTCGTTTTGCGCGCCTCTGGTTTTCTTTGCAGGCATTGCCTCTGGATCCTGGGCGACGCGGCGACGTTGCTCGGCAGCGGCTCCGTCTGGGGGGAGCTGGTCCGGGACGCCGTGGATCGCCGGTGCTTCTACGACTGGGACGACGGCGGCGCTGGTTTGCTCGGCGTTGCTCGGCGCGGACACGAGGACGAGCTGGACGATGCGGTCGAGTTCGCTACGGCGTTTGACACGTTCGCAGACGAAGCGGGGTGCAGAGACGATATCTGCGACGCGCTAGGCTCCCTGAAACTAGCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014490