Os07g0560300

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Revision as of 08:41, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0560300| Description = Armadillo-like helical domain containing protein| Version = NM_001066517.1 GI:115472766 GeneID:4343592| Length = 220...")
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Gene Name

Os07g0560300

Description

Armadillo-like helical domain containing protein

Version

NM_001066517.1 GI:115472766 GeneID:4343592

Length

2201 bp

Definition

Oryza sativa Japonica Group Os07g0560300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:23030438..23032638

Sequence Coding Region

23030682..23030799,23030886..23032531

Expression

GEO Profiles:Os07g0560300

Genome Context

<gbrowseImage1> name=NC_008400:23030438..23032638 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:23030438..23032638 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggagaagaggcggcgacggcggcggcggcggagcgagatgagcaggggagtgtcacggcggcgctcgacgccattaccggtttggtgtctgcctccttggccgcttcgctcttcccgtacaagtggcagctcatcagggacaggctcaaccggctccacgccggcctcgccgacatagccaccggcggcggtgaaggcggcgaggggcatggggcgttggcgggggttcttggggcggtggtggagacggcgagggaggcgtcggagctggtgccgaggagccaggggaggcactacgggggagggaagctgcggctgcggagcgacctcgacgtcgtggcgggcacgctcgacgcgctcgtggcgcgggtggacgaggtgtacgcgtcgggcgcgctgacgcgggcgcgggcgctcgtcgtgtcgaggccctgcgccggcgccagccgcgacgacgtgcggttctacgtgcgggacctgttcgcgaggctcagggtgggcggcgccgagatgcggggggaggccgccgccgcgctcgccgaggtgctgcacgacgacgagaagtgcgtccgcgtcgtcgtgtccgacgtcgccgacggcgtctgcgtcctcgtctggctgctcgagtgccccgacgcctgcgtccaggaggaggtcctggaggccgtctccgtgatcgccgggtttgaggcttacagaggcgaccttgtcgtcggcggcgtcatcgctccggtgatccgtgtcctcgacagtgccggggacaggccctcggcgaaggagcgggcggcgcggttgctgtgcaagctcaccgagaactccgacaacgcgtgggccgtcgccgcgcacggcggcgtcacggcattgctcaacgtctgcgccgactacaccgccagcggcggcgagctcgtgtgcgcggcttgccgtgtgctgaggagcctcgccggcgtcgacgagatcagaaagtacatggtggccgaggccggcgcggctccggtgctcgtgtcgctctgccggggcgccgcggacgaggcggcgcaaatccaggcgatggagctcctcgccgccatcgcctccggcgacagctccgtcagggaggccgtgctccaggaaggcgccgtcgagtccctggtcagcgtgctcgacccggcctccccgcgctcctccaaggcgcgggaggtcgcgctccgcgccatcgacgcgctctgcctctcctccccacccttgacatcccggctcgtcgccgccggcttcctcgaccgcgtcctcgtcttcctccgcagcggcgacgccacgctgcagcactgcgccctgaaggcggcgcaccggctatgccacgcctcggaggacaccaagaaggccatgggcgacgccgggttcatgccggagctcgtgagcatcctccacgccgccaagtcgctcgaggcgcgggacatggcggcggaggcgctctgcgccatggtgtccgtgcaccgcaaccggaagcggttcgtccaggaagaccgcaacgtggcgcaggtactgcagctgcttggccccgacgacgagaagctctcgccggcgaagcgcttcttgctctccaccctgatgcacctcagcgacagcacctccggccgccggaagatcatgtcatcggagcatctcaggaatctcgagaggctagcagagacgaacgtgacggacgccaagaagatcgtgaagaagcttggcgggagcaagctcaggaacatcttccatggcatctggagcctgcagaaagcttga</cdnaseq>

Protein Sequence

<aaseq>MGEEAATAAAAERDEQGSVTAALDAITGLVSASLAASLFPYKWQ LIRDRLNRLHAGLADIATGGGEGGEGHGALAGVLGAVVETAREASELVPRSQGRHYGG GKLRLRSDLDVVAGTLDALVARVDEVYASGALTRARALVVSRPCAGASRDDVRFYVRD LFARLRVGGAEMRGEAAAALAEVLHDDEKCVRVVVSDVADGVCVLVWLLECPDACVQE EVLEAVSVIAGFEAYRGDLVVGGVIAPVIRVLDSAGDRPSAKERAARLLCKLTENSDN AWAVAAHGGVTALLNVCADYTASGGELVCAACRVLRSLAGVDEIRKYMVAEAGAAPVL VSLCRGAADEAAQIQAMELLAAIASGDSSVREAVLQEGAVESLVSVLDPASPRSSKAR EVALRAIDALCLSSPPLTSRLVAAGFLDRVLVFLRSGDATLQHCALKAAHRLCHASED TKKAMGDAGFMPELVSILHAAKSLEARDMAAEALCAMVSVHRNRKRFVQEDRNVAQVL QLLGPDDEKLSPAKRFLLSTLMHLSDSTSGRRKIMSSEHLRNLERLAETNVTDAKKIV KKLGGSKLRNIFHGIWSLQKA</aaseq>

Gene Sequence

<dnaseqindica>1840..1957#108..1753#acagctatcacacgtacttatacctccgccgcttcttcctcttccctcccatttcgcgcatttgcaagaatgcgtcgttgagcttagcgggtgaggtggtcggaggcatgggagaagaggcggcgacggcggcggcggcggagcgagatgagcaggggagtgtcacggcggcgctcgacgccattaccggtttggtgtctgcctccttggccgcttcgctcttcccgtacaagtggcagctcatcagggacaggctcaaccggctccacgccggcctcgccgacatagccaccggcggcggtgaaggcggcgaggggcatggggcgttggcgggggttcttggggcggtggtggagacggcgagggaggcgtcggagctggtgccgaggagccaggggaggcactacgggggagggaagctgcggctgcggagcgacctcgacgtcgtggcgggcacgctcgacgcgctcgtggcgcgggtggacgaggtgtacgcgtcgggcgcgctgacgcgggcgcgggcgctcgtcgtgtcgaggccctgcgccggcgccagccgcgacgacgtgcggttctacgtgcgggacctgttcgcgaggctcagggtgggcggcgccgagatgcggggggaggccgccgccgcgctcgccgaggtgctgcacgacgacgagaagtgcgtccgcgtcgtcgtgtccgacgtcgccgacggcgtctgcgtcctcgtctggctgctcgagtgccccgacgcctgcgtccaggaggaggtcctggaggccgtctccgtgatcgccgggtttgaggcttacagaggcgaccttgtcgtcggcggcgtcatcgctccggtgatccgtgtcctcgacagtgccggggacaggccctcggcgaaggagcgggcggcgcggttgctgtgcaagctcaccgagaactccgacaacgcgtgggccgtcgccgcgcacggcggcgtcacggcattgctcaacgtctgcgccgactacaccgccagcggcggcgagctcgtgtgcgcggcttgccgtgtgctgaggagcctcgccggcgtcgacgagatcagaaagtacatggtggccgaggccggcgcggctccggtgctcgtgtcgctctgccggggcgccgcggacgaggcggcgcaaatccaggcgatggagctcctcgccgccatcgcctccggcgacagctccgtcagggaggccgtgctccaggaaggcgccgtcgagtccctggtcagcgtgctcgacccggcctccccgcgctcctccaaggcgcgggaggtcgcgctccgcgccatcgacgcgctctgcctctcctccccacccttgacatcccggctcgtcgccgccggcttcctcgaccgcgtcctcgtcttcctccgcagcggcgacgccacgctgcagcactgcgccctgaaggcggcgcaccggctatgccacgcctcggaggacaccaagaaggccatgggcgacgccgggttcatgccggagctcgtgagcatcctccacgccgccaagtcgctcgaggcgcgggacatggcggcggaggcgctctgcgccatggtgtccgtgcaccgcaaccggaagcggttcgtccaggaagaccgcaacgtggcgcaggtactgcagctgcttggccccgacgacgagaagctctcgccggcgaagcgcttcttgctctccaccctgatgcacctcagcgacagcacctccggccgccggaagatcatgtcatcggagcatctcaggtaaccaacaaatcctcaaacaaattctcgccaaattcctcgttttcaaacactaatggtcatcaaattgggtccgaaaatggcaggaatctcgagaggctagcagagacgaacgtgacggacgccaagaagatcgtgaagaagcttggcgggagcaagctcaggaacatcttccatggcatctggagcctgcagaaagcttgacgacgacaagaaccagctcaccgctagtactatactactgctcgtatggccttagctaacacacatgttcgcctcatgtttttttgtaaccgtgaatggacgaatcaatcccaagtgtattctactactccactcgatgatgaattcttgatactcagagaactcatcactcatcctctgtgtatactagctcatctcatccgtgtcaaataaaagtacaaaaaaaaaatccattcgagaaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0560300, RefSeq:Os07g0560300