Os07g0562400

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Revision as of 08:41, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0562400| Description = Major facilitator superfamily protein| Version = NM_001066525.1 GI:115472782 GeneID:4343603| Length = 1805 bp| Defi...")
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Gene Name

Os07g0562400

Description

Major facilitator superfamily protein

Version

NM_001066525.1 GI:115472782 GeneID:4343603

Length

1805 bp

Definition

Oryza sativa Japonica Group Os07g0562400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:23134719..23136523

Sequence Coding Region

23134775..23136379

Expression

GEO Profiles:Os07g0562400

Genome Context

<gbrowseImage1> name=NC_008400:23134719..23136523 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:23134719..23136523 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgacgcggccaccaccccgctgctgacgagccatgaagcaaagccggccaaggcactgtccatcgacgacgccatcgagacgtacatcggcgccaccggcgcccgccagctgctcacggccatgttgctggccttcgcttgggctttcgaggcgcagcaggtgttcatgtccgtgttcacggacgcggagcccacatggcactgcaccggcgtcgcggccggcgaccccggctcgttctgctcgctggcggccgcttcggcttcggcttcggcgtgcgcgctcccgcccggcacgtgggagtgggaccgcccggccgagacgtcggtggtgtcggagtgggcgctcaagtgcggcggcggcggcccggcgctcgtctccctcccggcgtcgtcgttcttcgccggcaacctcgccgggggcttcctgctcacgacgctcgccgacactctcctgggacgaaggaagatgctcgtcctgtcactggtgaccatgtccgtcgccggcgtgctcacggtcttctcgccgaacgtgtgggtgtacgccgccctgcggttcgtgtgcgggttctgcagatccacggcgggcacgtccgcgatggtcctgtccacggagctcgtcgggaagtggtggcgcaacacggtgagcgtcgccgcgttcgtcttcttctccgtcgggttcatgtcactcccggcgctcgcgtacacgctccgcgaggcgtcgtggcggaacatgtacgtgtggacgtcgctcccgtccctctgctacgccgtcctcctctacttcctcgtccaggagtcgccgcggtggctgctggtgcgcggacggaagcaggaggccatcgcggcgttgcggcagatcgcgtcgctcaacggcggcgaaggcattacaacgtcgagcttcaccaagctggaaacgtgcgccggggaggtcggggacggcgtggccggcggcgagggcatgttctccacgctgcggtcgatatgtgagcggcggtgggcgctccggaggctggcggcgatcacgacggccaccttcggcgtcggcgtggtctactacgggatgccgctcagcgtgggcagcctgagctccgacctctacctgagcgtggcgtacaacgcggcggccgagctcccgtcgtccgtcctctcgtggctcctcatgggcaggttcaaccggcgcagctcgctggtcgcgctcaccgcggcgtccgggctgtgcagcctcgcgtgcgtcgtcatcccggacccggaggccggcgccggcggctcgcacttgcgcctcgccgccgagctggcctccttcttcgcgtcgtgcgcggcgtacgacgtgctgctcatgtactcgatcgagctgttcccgacgtcggtgcgcaactcggcggtggggctggtgcggcaggcgggggtgctgggcggcgtggtggcgcccatgctcgtcgcgctcggccgcgagaggagctactggtcgttcggcgtgttcgggctcaccgtcggctgcctcgggctgttcgtcaccttcctgccggagacgaaggggaggaggttgtcggacaccatggaggatgaggaggaggccgccgccgtcttgtctggaggataa</cdnaseq>

Protein Sequence

<aaseq>MADAATTPLLTSHEAKPAKALSIDDAIETYIGATGARQLLTAML LAFAWAFEAQQVFMSVFTDAEPTWHCTGVAAGDPGSFCSLAAASASASACALPPGTWE WDRPAETSVVSEWALKCGGGGPALVSLPASSFFAGNLAGGFLLTTLADTLLGRRKMLV LSLVTMSVAGVLTVFSPNVWVYAALRFVCGFCRSTAGTSAMVLSTELVGKWWRNTVSV AAFVFFSVGFMSLPALAYTLREASWRNMYVWTSLPSLCYAVLLYFLVQESPRWLLVRG RKQEAIAALRQIASLNGGEGITTSSFTKLETCAGEVGDGVAGGEGMFSTLRSICERRW ALRRLAAITTATFGVGVVYYGMPLSVGSLSSDLYLSVAYNAAAELPSSVLSWLLMGRF NRRSSLVALTAASGLCSLACVVIPDPEAGAGGSHLRLAAELASFFASCAAYDVLLMYS IELFPTSVRNSAVGLVRQAGVLGGVVAPMLVALGRERSYWSFGVFGLTVGCLGLFVTF LPETKGRRLSDTMEDEEEAAAVLSGG</aaseq>

Gene Sequence

<dnaseqindica>57..1661#atcgatcgtgaggaagatcagtagagagcgcactcaacttcgccaaatcgccgataatggccgacgcggccaccaccccgctgctgacgagccatgaagcaaagccggccaaggcactgtccatcgacgacgccatcgagacgtacatcggcgccaccggcgcccgccagctgctcacggccatgttgctggccttcgcttgggctttcgaggcgcagcaggtgttcatgtccgtgttcacggacgcggagcccacatggcactgcaccggcgtcgcggccggcgaccccggctcgttctgctcgctggcggccgcttcggcttcggcttcggcgtgcgcgctcccgcccggcacgtgggagtgggaccgcccggccgagacgtcggtggtgtcggagtgggcgctcaagtgcggcggcggcggcccggcgctcgtctccctcccggcgtcgtcgttcttcgccggcaacctcgccgggggcttcctgctcacgacgctcgccgacactctcctgggacgaaggaagatgctcgtcctgtcactggtgaccatgtccgtcgccggcgtgctcacggtcttctcgccgaacgtgtgggtgtacgccgccctgcggttcgtgtgcgggttctgcagatccacggcgggcacgtccgcgatggtcctgtccacggagctcgtcgggaagtggtggcgcaacacggtgagcgtcgccgcgttcgtcttcttctccgtcgggttcatgtcactcccggcgctcgcgtacacgctccgcgaggcgtcgtggcggaacatgtacgtgtggacgtcgctcccgtccctctgctacgccgtcctcctctacttcctcgtccaggagtcgccgcggtggctgctggtgcgcggacggaagcaggaggccatcgcggcgttgcggcagatcgcgtcgctcaacggcggcgaaggcattacaacgtcgagcttcaccaagctggaaacgtgcgccggggaggtcggggacggcgtggccggcggcgagggcatgttctccacgctgcggtcgatatgtgagcggcggtgggcgctccggaggctggcggcgatcacgacggccaccttcggcgtcggcgtggtctactacgggatgccgctcagcgtgggcagcctgagctccgacctctacctgagcgtggcgtacaacgcggcggccgagctcccgtcgtccgtcctctcgtggctcctcatgggcaggttcaaccggcgcagctcgctggtcgcgctcaccgcggcgtccgggctgtgcagcctcgcgtgcgtcgtcatcccggacccggaggccggcgccggcggctcgcacttgcgcctcgccgccgagctggcctccttcttcgcgtcgtgcgcggcgtacgacgtgctgctcatgtactcgatcgagctgttcccgacgtcggtgcgcaactcggcggtggggctggtgcggcaggcgggggtgctgggcggcgtggtggcgcccatgctcgtcgcgctcggccgcgagaggagctactggtcgttcggcgtgttcgggctcaccgtcggctgcctcgggctgttcgtcaccttcctgccggagacgaaggggaggaggttgtcggacaccatggaggatgaggaggaggccgccgccgtcttgtctggaggataaggctatggcgcgagcgacatggataacaacggggagctcgtgtagatgactttcaggtttgttctgtacatcttggaaattaaatttgaaaatatacttttcattaaaaaaaattcagaaatattcgaaatgcaaaatttttac</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0562400, RefSeq:Os07g0562400