BGIOSGA014618

From RiceWiki
Revision as of 15:57, 22 July 2012 by 124.16.129.48 (talk)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA014618

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014618, complete gene.

LocusTag

OSJNBB0038F03.12

Ensembl Transcript ID

BGIOSGA014618-TA

Ensembl Protein ID

BGIOSGA014618-PA

Length

6945

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26070754..26077698

Sequence Coding Region

26077650..26077698,26077448..26077533,26076623..26076664,26076504..26076549,26076166..26076252
,26076023..26076078,26075278..26075395,26075084..26075142,26074613..26074684
,26073990..26074053,26073788..26073891,26073167..26073238,26072733..26072819
,26072586..26072653,26072180..26072248,26071993..26072075,26071683..26071773
,26071536..26071601,26071001..26071094,26070754..26070834

Genome Context

<gbrowseImage1> name=IndicaChromosome04:26070754..26077698 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:26070754..26077698 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCGCCGCGGCCCTCGCCGGCGGCGAGGCTGCTGAGGGAGTACGGGTGGGACCTGTTGCTCGGATCGATTGCCGCGTTCTACGCCGTCATGGTGCCCTACACCAAGGTGGAAGAGAGCTTCAACGTGCAGGCCATGCATGACATTCTCTACCACAACTATCATATTGAGAAGTATGATCATTTAGAATTTCCTGGTGTTGTCCCTCGGTCATTTATAGGCGCATTGGTTGTATCTGTTATCTCATCGCCTGCAGTCTTCGTAATGCATTTATGTCATGTTCCAAAGGTTTATGGTCTTCTAGCAGTTCGGATAGTGTTGGGTAGTATTATCCTGATGACTTTGAGACTTCTCCGAGTTCAGGTAAAAAGGAAGTTTGGTCATCATGCTGAAGCATTCTATCTGATACTAACTGCTACCCAGTTTCACTTATTGTTCTACTCAACCAGGCCCCTTCCGAATGTCTTAGCTTTAGCTTTTGTTAACTTGACATACTATTTCTGGTTCAAGGGAAACCATCGACGCACATTACAGGCCCTGATTGTCGCAGCAGTTATTTTTAGGTGTGACATGATTTTGCTTCTTGGTACAATAGGACTTGCACTTTTGCTGAGCAGGTCTATTTCTCTATTGGAAGCAATCAAATGTTGTGTAAGCACTGCCATTATATGCATTGGCTTCACTGTACTGGTTGACTCTATACTGTGGCGGCGAATCCTGTGGCCAGAATTTGAGGTTTTGTGGTTTAATTCAGTTCTGAACCGGAGTTCAGAGTGGGGTACACATTCCATCCATTGGTACTTCACCTCAGCACTTCCACGCTCCATGCTGGTAGCATATCCTCTTTGCATGGTCGGTGCTCTTCTTGACAGAAGGATAGTGCCATACATACTTCCAGTCTTCTCATTTGTTGTGCTTTATTCAAAGCTTCCACATAAGGAGCTTCGCTTCATTATGGCTTCGATTCCCATGCTTAATGTGTCTGCTTCACTAGCAGCAAGCAGAATATATAATAACAGAAAGAAAACTGGGTGGAAGTTACTTTATGTTCTCATGATTGGTGGCTTTCTTTCCAGTCTAGGATACTCTGGTGTAACTTTCATGGCATCCTACAATAATTATCCTGGTGGATATGCTCTAAAGGCTCTACATGAAGCAGATTCTGTAATGAAGGACAAAATTGTTCACATTGATGCCTTCACTGCAATGAGTGGAGTTTCACGTTTCTGTGAAAGTGAATATCCTTGGAGATATTCTAAGGAGGAAAAAATTTCCATCGAGGAATATCAGGAAAGAAATTTCACATATCTGCTGAATGAACACCGCCATATCAGTGGCTACAAGTGCTTGTTTGCCGTGGATGGATTCTCCAGAGCGAAAATTCAACCTCGAATCCCACTACTCTCACTGGTGAAAGAGCCAAAAGTGTTTGCACATGGGAATACGAGAGACCCTGATATTCTTTCGCTGAATTGGCCCGGTTGCCCTTGA</cdnaseq>

Protein Sequence

<aaseq>MAPPRPSPAARLLREYGWDLLLGSIAAFYAVMVPYTKVEESFNVQAMHDILYHNYHIEKYDHLEFPGVVPRSFIGALVVSVISSPAVFVMHLCHVPKVYGLLAVRIVLGSIILMTLRLLRVQVKRKFGHHAEAFYLILTATQFHLLFYSTRPLPNVLALAFVNLTYYFWFKGNHRRTLQALIVAAVIFRCDMILLLGTIGLALLLSRSISLLEAIKCCVSTAIICIGFTVLVDSILWRRILWPEFEVLWFNSVLNRSSEWGTHSIHWYFTSALPRSMLVAYPLCMVGALLDRRIVPYILPVFSFVVLYSKLPHKELRFIMASIPMLNVSASLAASRIYNNRKKTGWKLLYVLMIGGFLSSLGYSGVTFMASYNNYPGGYALKALHEADSVMKDKIVHIDAFTAMSGVSRFCESEYPWRYSKEEKISIEEYQERNFTYLLNEHRHISGYKCLFAVDGFSRAKIQPRIPLLSLVKEPKVFAHGNTRDPDILSLNWPGCP</aaseq>

Gene Sequence

<dnaseqindica>1..49#166..251#1035..1076#1150..1195#1447..1533#1621..1676#2304..2421#2557..2615#3015..3086#3646..3709#3808..3911#4461..4532#4880..4966#5046..5113#5451..5519#5624..5706#5926..6016#6098..6163#6605..6698#6865..6945#ATGGCGCCGCCGCGGCCCTCGCCGGCGGCGAGGCTGCTGAGGGAGTACGGTGAGTGCTCTCCTCTCGCTCTCGGCCTCGCGAAGCCTCTCCAAATCAGGGCTCTGCTGCGGTGGTGGGAGGGTTTTTGGGATCTGATGCGTCGGGGGCACTACTCTCGCTTGCAGGGTGGGACCTGTTGCTCGGATCGATTGCCGCGTTCTACGCCGTCATGGTGCCCTACACCAAGGTGGAAGAGAGCTTCAACGTGCAGGTTCCGGTTCCGGCTCCCTCTCCGTTGAGCATCCGAGTGGCTGGATTACATTGTAGTCGTGCTTCGTGTGCAATTACAGTAGGGATTTTCTGTTGTTTGCTCAAGTAGTAGTGTGTGTCCTTATTCTCTGTTGCTGTTCAGTTACTAGACACGGGATTCAGGATGATTGCTGATAATTTGCTAATGTTCATTTTGGTTGCAACTGGTTGCTAGATGATATTGGTGTGCACATGTGAATTGTAGGATAGTATGACTTAACAACAATCAGCTTATGTGAATTTATTTACATTTTCTGCAGACACGCAGAATCCATGCTGAATATTGATGAATCGGGTATCTTTGCCGTAGACATCCAAGATGCACCCTTTCTATATTTGGTAGTTCATACATCATATATATTTTATCATGAGCGTTGAAAAGCTGAAGTTGCTCAAGTTCCAGTGTCACCTATGCAATGTTAAAGAAGTAGAGGAAAATTTGCAGGATAATTATGAGTTTCAACTTTCAACCCTTCATGTCTAAAAACTAATGCTTTATGTTTGATAACTTCCCTTAGGCTCTGCGTGATAATCAATTTGAATGAAATTTGCTTTGGGAAATTGTTTCATTCTCTACTGCTCATTTATCTTTCCTTTGCCTGGTATTGAATCTTTTACTTGCTAATTCTTGCCTTTTTCCGTTTAGTTTGGTAAATTTTTTTACCTATTCCACAGTGTATGTTTGCACTTTTACTGTAATGCCATTACAATGTTTAGGCTAACACTTTGCTCATGTATGTTCTAGGCCATGCATGACATTCTCTACCACAACTATCATATTGAGAAGGTAATCATTTCTGCTAGTCTATCAATACAACATGCTTGATGCTTATTTAATTTCTTTCTTCAATTTGCTGCAGTATGATCATTTAGAATTTCCTGGTGTTGTCCCTCGGTCATTTATAGGTAATACTATGTTCACTTGAAGCCTTGATCTGTGCACTATGCTACAATTTTTCCGCTAATGACCATTGCTTGGCTCAAGCATAATGAAATGGCAAGTAGATGGTCAAGGTCAGATGGCATTACCAGTTTACCACAATATACTCCTACTAGATATGCCTGTAGTGTCTATATATGGTATGACTGGCCTTGCAGATTTTGTAATCTGGACATGACGCAGATCATTAACACCGTTTACTACATATATTTTTCAGGCGCATTGGTTGTATCTGTTATCTCATCGCCTGCAGTCTTCGTAATGCATTTATGTCATGTTCCAAAGGTTTATGGTCTTCTAGCAGGTGCTGTCAATAACTTAGCACATGTCTTCTTGCATGTTGTATCTGTTTTTGTTGCCATATTGATGTTCTTCTATTTTGCCCTTTTAGTTCGGATAGTGTTGGGTAGTATTATCCTGATGACTTTGAGACTTCTCCGAGTTCAGGTATTCCTTTTCACTTCTTGTTCTGTTTAAAAGGGTTTATTGCAAGTATGCACTGTTTCTCAGTTCTCCTAGGTACTACCAATATTCTGAAAACGCTGTTTCCCTGAAAAGGGGTAAACCTCAATCCTTTTACCTGTATAACCTTCTCCTGGCCTTGAAGTGCAGCAACTCATAGAATGGCCACCATTTTTTTTTAAAAAAAGGAACCTTGCTTATCAAATTTGGTTTTTGTTTTGATGCGTCTGTGAATTTGCCAAGGGCCTAAGATGCATGGTCGTCTTGCCTGTGGCATAGCTGCAGTATGCTAGCCTTGTTTGAATCTTCTTCTTTTGGCTTGGTTTGGACCATATACCTTACGATACCTTTCACTCTGTGCCATTTATATTCCATACAAATCTGGATAGAAGAGAACTTAATTTTTGTTTCTACTATCTCATGCACAAACTTCTAAGTGCTGTATATCATCAAGATATCCCTTTGGGTTATGTGTTTATGTCAAACTGTTCTATGCCCATCTTGAGTAACATTTGTTTTCTATAATTTGCACTGAATCGTCCCGTGAGCACGAGTCTGTTATTGTGTCCTTGGACACCATAACGTTTTTCTCAGTTCATTTCTGATATACAGGTAAAAAGGAAGTTTGGTCATCATGCTGAAGCATTCTATCTGATACTAACTGCTACCCAGTTTCACTTATTGTTCTACTCAACCAGGCCCCTTCCGAATGTCTTAGCTTTAGCTTTTGGTGAGGACATTGTTTAAATCAAACACAAGTCTGTTCGAGTGTTACTGATTTTTGTGACACTATTGGCAGTAGCATTAATCATATGTGGGGTTTGTGTAATAATCGTGCAACTCATTGTTTCTTTCTGTCTCGCAGTTAACTTGACATACTATTTCTGGTTCAAGGGAAACCATCGACGCACATTACAGGCCCTGGTATGCTAATTTTTTAACACCTTTACCTTACTTTCACACCATTTTGTTTGCATGCTGCTGTTTTCACATTTTTGTATACACTGCAGAAAGCAAGAATTTATTTCAATTCGAGTTGCATATATTGTTGAATTCAAAATTTGACATCCTGCATTGCACACAATAACTCCAAAGAATCTGAGTTCTGGACATGACATTCTAAAGTTGCAAGTTTCAACATGAAACTGAGAAATTCTTTCTTTACTCTTCGTTCAGTTCAATTTCTTGTTGATTTACTAAATTGAGAAATGATTCTCAGTTATTTATTTGCAGACCAATAAAGATTACAAATTGGTTTTATAGCATTGAAAGATCCTCAGTTCTGCTTTATCCTTCTGAAGTAATTCTCCATATTGCTTGCAGATTGTCGCAGCAGTTATTTTTAGGTGTGACATGATTTTGCTTCTTGGTACAATAGGACTTGCACTTTTGCTGGTGAGTTTCACCTACAAAACCTGAATTTCTCTTGGCAGTTGCACAGTCATTTCATACTCTTTTATGTAGTGAAATCTTTGAGGAAGCAAGGGTCCAAAGTTTATATTACTCATTTTTTGTAGGCTATGCACAAATAGCTCTTATCTCGTACACTAGGTACAAATACCAATTGTCAATACTCTCTATTACTTCCCAACTTTGTGTTTGTTCAAATTCAATGCAAAGTAACTTTGTCATAGAATCATAAGGGCTTCACGGTTCAACCAGATTTTGCGGTTTTGTGCTTTCATCATTTGTGTCTCTGTAGTGAATTAGTAAACTTGTTTGAAGGACCATGAGGGGACTGTGGTTAATTATCTCTATAAGTTATTTTTATTGAGGCATGGCTAATAATCTCTAAGTGAGTAACTTGGTATGCCACCAGGCTATTAAAATGATAGCACTCACTTATACTGTCATATATCAAGTTGTTATATCTATTTGGACTTTGTATGTATTCTTCTGCTTACTTGATCTGGGAAGAGTCGGGGCTGAGGTGCATTTGACTATGCTGTGACAGAGCAGGTCTATTTCTCTATTGGAAGCAATCAAATGTTGTGTAAGCACTGCCATTATATGCATTGGTATGTTGCTTTCTACTTTCTTGAACTTTCTCCAATAGTCTAACAGAAGTCTGTGCAAATCTGCAAGAAACATTTCTCACTATGAATAATGTTCTTAGGCTTCACTGTACTGGTTGACTCTATACTGTGGCGGCGAATCCTGTGGCCAGAATTTGAGGTTTTGTGGTTTAATTCAGTTCTGAACCGGAGTTCAGAGTGGGGTGTATCCTTTTTCTATTTGTGTGCATGTGCCAAACTGCAGTTTCCTTTTTTTTTTAATAATAATTCTAGTTAATACTTTCAGTGCACAATGAAACACCGTTTTTTTCCTCTTTAGCCAGAATTTTATTCTTTTTTCCTAGCAAATATATGCATGTGTTCTCTCTTTCACTAAGTCACTTCACGGAGACATTTTCATATGCACTCCTTTCTCTTTAGCCAGAATTTTATTCTTTTTTACTACCAAATATATATGCATCAGTTCTCTCTTTCACTAAGTCACTTCACAGAGACATTTCATATGAGAATATGCAAAGCACATATCTTTTGTATTAAGATTGGGAAGATTGAAGTTTCATTTTCATATGCACTGAACATGATGTTAATCTCTATTAGTCACATGAATACAAAAAAGGATGCAACATATATACACTTCTTGTTCAAGACTTATCCTCTTCTTCTTTTTAGATTCATGTGGTGAAATCTATGTATTATCTCCTGAAACTTATGCGAAGCTCCCAGCCCTGTTATCCATGACTACCATAAACTTTAGACACATTCCATCCATTGGTACTTCACCTCAGCACTTCCACGCTCCATGCTGGTAGCATATCCTCTTTGCATGGTGAGATAAGAAACTTCCATACAAGAAATTGTGCTACTTACGTGGCTAAAAAGTGCATGTGCCTTTTGCTTGAACAAGTATATAACTTATTCCATGCCTTCTTATCATGTATTTAATATGCATGAAACATGATGCTTAGCTAGTAATAGTTGATTGGCTTCCCATCTCTACATGTACTTTATATCAAAACTGTTACTTCATACTATTTGATTGAGTCAACTAATTACATTTTTATGATGTATCTTTTCTGATGGTGGTACTATCAATGCATTATTGGTTATTGTTTTTTTTATTTGATTTTTTATTGGAAGTAAGAAATGTATCTCATGAAGCCTTTTCAGTGACAGGTCGGTGCTCTTCTTGACAGAAGGATAGTGCCATACATACTTCCAGTCTTCTCATTTGTTGTGCTTTATTCAAAGCTTCCACATAAGGTATCTCTACATCTCTTGATACTAGTTCCATCCTTATATTTGGCCATTCTTGTACATGATGACTGATGTTGTGTTTCAGGAGCTTCGCTTCATTATGGCTTCGATTCCCATGCTTAATGTGTCTGCTTCACTAGCAGCAAGCAGAATGTGAGCATAACCAATCTTCTGTCATATCTAGTTCCTACTCCCTCTATTTCACAATGTAAGTCATTCTAGCATTTCCCATATTCATATTAATGTTAATGAATCTAGACATATATATCTATCTAGATTCATTAACACCAATATGAATGTGGGAAATGCTAGAATGACTTACATTGTGAAACGGAGGAAGTACTATTTTATCAATTTACTGATCCAAGCTAGGAATGCTAGCTTCATTATCAGAACTCCTTTTATTTCATACCCTTCGTATTGAATGGCATTTCCTCTCTTTCTTTGCTTTGCGATTTCGACCCATGAATATATGTTTGTCTATCTTCAGATATAATAACAGAAAGAAAACTGGGTGGAAGTTACTTTATGTTCTCATGATTGGTGGCTTTCTTTCCAGGTACAATAATTTAACCATGGTTATATTGTAAAATATTAATATGGTATCCTTTTTCAAGTAGCACAATATATGCTACCGTTGGAAACTCACATATAATTATATAGTCTAGGATACTCTGGTGTAACTTTCATGGCATCCTACAATAATTATCCTGGTGGATATGCTCTAAAGGCTCTACATGAAGCAGGTGAGACCTACATAAGTTATGTGGAATACGTGATATTATGATAGTTTTCTTCTGTTAACAAAACTGCAAGGGCTTGGCTGAACCGCAAGCAGCACATTACAAATTGAACAGCTAGTAGTGTCTCATCTAGTGGTGTCTACTGTTTTAGCGATTATGGGGTATGTTGACAATAATATCTTTATTGATGGCACATACTATTGGTTGCTTCTCTCTTACCAGATTCTGTAATGAAGGACAAAATTGTTCACATTGATGCCTTCACTGCAATGAGTGGAGTTTCACGTTTCTGTGAAAGTGAATATCCTTGGAGGTATCCTCTGTAGTGTTTTTATCTTTGTTAGTATCTTTTATCATGCCATTTATGAGCATCTCAAAATCTGTTCACTGGCAGATATTCTAAGGAGGAAAAAATTTCCATCGAGGAATATCAGGAAAGAAATTTCACATATCTGCTGAAGTAAGTTTACTTACTTCCTCCGTTTCACAATGTAAGACTTTCTAGCATTGCCCATATTCATTTAGATGTTAATGAATCTAGACATATGTATGTATTTAGATTCATTAACATCCATATGTACGTGGGCAATACTAGAAAGTCTTACATTGTGAAACGGAGGGAGTATTTGCTAAAATACCTTATGCACTTATTTTTGTTACTATCTGGATATTTAAAGATTGAAGCGGACTTTTGCAAGCACCACTGAGAAGTGGGGCCTACATATATGGGGAGTTCACCTAATGTTGGAGAAGTCCTTGTATTACCTCCATGTTTGTTTGAGTAGAAGCAAATTACCGAACAACTCTTGTTACCATGCATGAATAAATATAATCAAAGGCACAACTGGTACTCATTTCACGCTGTAATGCTTTTCTTATTTCTTATTGTTGTACCAAACAGTGAACACCGCCATATCAGTGGCTACAAGTGCTTGTTTGCCGTGGATGGATTCTCCAGAGCGAAAATTCAACCTCGAATCCCACTACTCTCACTGGTACGCTATCATTCTTTACAGAGTAGCTATCTACCTTATCGGCATGCAGATTACATACTCCAGCCAAATGCCAGCATTGCCATCCTATTTCTGGTTCTGTCAAACATTAAACTCACGGTGGTGATTGAATACTGGCTCAGGTCGCTAACCTCAGCATTTACTGCAGGTGAAAGAGCCAAAAGTGTTTGCACATGGGAATACGAGAGACCCTGATATTCTTTCGCTGAATTGGCCCGGTTGCCCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014618