BGIOSGA014629

From RiceWiki
Revision as of 15:57, 22 July 2012 by 124.16.129.48 (talk)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA014629

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014629, complete gene.

LocusTag

OsI_16829

Ensembl Transcript ID

BGIOSGA014629-TA

Ensembl Protein ID

BGIOSGA014629-PA

Length

3611

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25921356..25924966

Sequence Coding Region

25924277..25924966,25923077..25923174,25922855..25922989,25922551..25922740,25922355..25922469
,25921356..25922278

Genome Context

<gbrowseImage1> name=IndicaChromosome04:25921356..25924966 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:25921356..25924966 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGCAGGAGAGGCGGAGGAAGCGGCAGCCCGGGCCGCCGCGCCTCGAGCTGGTGGTAGCGCACCCGCGGGAGGAGGAGATGGCCGGGCTCGACGGCGGCGGCGACGCCGAGGAGGGGGCCACGCATGCCCGCGGCGGCGGCGGCGCGCCGCCGCCGTGGCGGGAGCAGCTGACGGCGCGCGGGCTGGTGGCGAGCCTGGCCGTGGGCGCCATGTACAGCGTCATCGTGATGAAGCTGAACCTTACCACGGGCCTCGTCCCCACGCTCAACGTCTCGGCCGCGCTCATCGCCTTCGTCGTCCTCCGCGGCTGGACGCAGGCGCTCGCCCGCCTCGGCTTCGCCGCCCTCCCGTTCACGCGGCAGGAGAACACCGTCGTCCAGACCTGCGCCGTCGCCTGCTACAGCATCGCAGTTGGAGGCCAGGACCACCCCCCATTGCATCCATCCTCCATTCGTCGTCTACCTAGTCTAATGGAGATCCCGACTGATTGGTTCTTTGGATCTTTCTGTGCAGGTGGGTTTGGTTCTTACTTGCTTGGGCTCAACAAGAGGACTTACGAGATGGCGGGCGAGGACACGGAGGGCAACGTGCCGGGGAGCTACAAGGAACCCGGCATTGCGTGGATGACTGGATTCCTTCTCGCCGTCAGCTTCGTCGGACTTCTCGCTCTCGTCCCTCTTAGGAAGGTCATGATAATTGACTACAAATTAACTTACCCAAGTGGGACTGCAACAGCTGTGCTTATAAATGGATTCCACACACCTCATGGGGATGCAATGGCAAAGCAGCAAGTAAATGGATTCACCAAATATTTTGCTATGAGTTTCTTTTGGAGCTTCTTCCAGTGGTTTTACTCTGGTGGAGACAATTGTGGGTTCTCGCAGTTTCCAACGTTTGGACTAAAAGCTTGGCAACAAACATTCTTCTTCGATTTCAGTTTCACATATGTTGGGGCAGGGATGATTTGCTCCCACCTTGTTAATCTGTCTCTCCTACTCGGCGCCATTCTCTCATGGGGAGTAATGTGGCCACTGATCAGTGATTTGAAAGGGGATTGGTATTCAGCAGATATACCTGAAAGCAGCATGAAAAGCCTGCAAGGGTACAAGGCCTTCATCTGTGTAGCTCTCATCCTAGGTGATGGCCTATACAATTTTGTGAAGATAGTTGCACTCACTATTAAGAATCTGTTTGATAGCTCAAAACTGAAGAATGCAAAGAAGGGGGAAGACATGCCAGTGCTCGATGAACTTCATCGTAATGAAGTTTTTACAAGAGACAATATTCCTTCCTGGCTAGCCTTCTCTGGTTATCTTGGATTAACTTTTATTGCAGTAATTGCCATTCCCATGATGTTCCATGAGATGAAGTGGTATTATGTTGTCATAGCATACTTATTGGCGCCTGCCCTTGGTTTCTGCAATGCCTATGGAGCAGGCCTAACTGACATCAATATGGCCTACAATTATGGAAAGATTGCCCTCTTCATTCTTGCAGCCTGGGCTGGGAAAGACTCTGGTGTAGTTGCTGGCCTAGTAGGCTGTGGTTTGGTGAAATCGCTGGTGTCCATATCTGCTGATCTGATGCATGATTTCAAGACAGGACATCTAACATTAACATCACCGAGATCGATGATTATTGCTCAGGCCATTGGAACTGTCATGGGTTGTGTAATTTCACCACTAACGTTCTTCTTGTTCTACAATGCCTTTGACATTGGCAACCCGGAAGGGTACTGGAAAGCACCATATGCTCTAGTCTACCGAAACATGGCGATTCTTGGTGTTGAGGGCTTCTCTGCTCTGCCCCAGCATTGCTTGCAGCTCTGCTATGGGTTTTTTGGCTTTGCAGTGGCAGCTAACCTTACGAGGGACCTTTGCCCACCGAAGTATGGGAGATGGGTTCCCCTACCGATGGCAATGGGGGTTCCTTTCCTGGTTGGTGCAAGCTTTGCCATCGACATGTGTATCGGGAGCCTGATAGTCTTCACCTGGCATATAATTGACAAAAGCAAAGCAGCACTAATGGTGCCAGCAGTTGCATCTGGTTTGATATGCGGGGATGGTCTTTGGATCTTCCCTGCGTCCTTGCTTGCTTTGGCCAAGATCAGCCCACCAATGTGCATGGCATTTAGGTCTACAAACTAG</cdnaseq>

Protein Sequence

<aaseq>MKQERRRKRQPGPPRLELVVAHPREEEMAGLDGGGDAEEGATHARGGGGAPPPWREQLTARGLVASLAVGAMYSVIVMKLNLTTGLVPTLNVSAALIAFVVLRGWTQALARLGFAALPFTRQENTVVQTCAVACYSIAVGGQDHPPLHPSSIRRLPSLMEIPTDWFFGSFCAGGFGSYLLGLNKRTYEMAGEDTEGNVPGSYKEPGIAWMTGFLLAVSFVGLLALVPLRKVMIIDYKLTYPSGTATAVLINGFHTPHGDAMAKQQVNGFTKYFAMSFFWSFFQWFYSGGDNCGFSQFPTFGLKAWQQTFFFDFSFTYVGAGMICSHLVNLSLLLGAILSWGVMWPLISDLKGDWYSADIPESSMKSLQGYKAFICVALILGDGLYNFVKIVALTIKNLFDSSKLKNAKKGEDMPVLDELHRNEVFTRDNIPSWLAFSGYLGLTFIAVIAIPMMFHEMKWYYVVIAYLLAPALGFCNAYGAGLTDINMAYNYGKIALFILAAWAGKDSGVVAGLVGCGLVKSLVSISADLMHDFKTGHLTLTSPRSMIIAQAIGTVMGCVISPLTFFLFYNAFDIGNPEGYWKAPYALVYRNMAILGVEGFSALPQHCLQLCYGFFGFAVAANLTRDLCPPKYGRWVPLPMAMGVPFLVGASFAIDMCIGSLIVFTWHIIDKSKAALMVPAVASGLICGDGLWIFPASLLALAKISPPMCMAFRSTN</aaseq>

Gene Sequence

<dnaseqindica>1..690#1793..1890#1978..2112#2227..2416#2498..2612#2689..3611#ATGAAGCAGGAGAGGCGGAGGAAGCGGCAGCCCGGGCCGCCGCGCCTCGAGCTGGTGGTAGCGCACCCGCGGGAGGAGGAGATGGCCGGGCTCGACGGCGGCGGCGACGCCGAGGAGGGGGCCACGCATGCCCGCGGCGGCGGCGGCGCGCCGCCGCCGTGGCGGGAGCAGCTGACGGCGCGCGGGCTGGTGGCGAGCCTGGCCGTGGGCGCCATGTACAGCGTCATCGTGATGAAGCTGAACCTTACCACGGGCCTCGTCCCCACGCTCAACGTCTCGGCCGCGCTCATCGCCTTCGTCGTCCTCCGCGGCTGGACGCAGGCGCTCGCCCGCCTCGGCTTCGCCGCCCTCCCGTTCACGCGGCAGGAGAACACCGTCGTCCAGACCTGCGCCGTCGCCTGCTACAGCATCGCAGTTGGAGGCCAGGACCACCCCCCATTGCATCCATCCTCCATTCGTCGTCTACCTAGTCTAATGGAGATCCCGACTGATTGGTTCTTTGGATCTTTCTGTGCAGGTGGGTTTGGTTCTTACTTGCTTGGGCTCAACAAGAGGACTTACGAGATGGCGGGCGAGGACACGGAGGGCAACGTGCCGGGGAGCTACAAGGAACCCGGCATTGCGTGGATGACTGGATTCCTTCTCGCCGTCAGCTTCGTCGGACTTCTCGCTCTCGTCCCTCTTAGGAAGGTCAGTGAGCTTCCACAGCCTTACTCTGTATCTTCGGTAGTTCTGCCATTTGATCAGTTCTGTTCGTGTTTTACTGCTTAGTTTATATGTGTAGATCTAATGATGCGTTCATGCTAGTTTATATCTGCAATGTCATGATTTATTTATAGAATAAATTAAATCATTATATGCTTATAATTTCAACAGTTCTGCCATTTGACCACGGTTCGCTGTAGCTCCTTACTCCTTAGAACTGCAATTCTACATTTCATAGGCGTTTTTGTCGTTCACCAGTTCACCCTTGTGAGAATTTCACAAAATTGTGGTAAACTGACCATCATCTCCATTTCAGCCTTTTCTATCTTTTGTCCCTTCAACATTTCGTAGGTGTTTTAATTTCATTGCACTATGTCACAGATTACATAAGCTAAAAAAAGGACAATTATGCCTGTATTTAGCTAGGTGATAGAGTTGAAGTGCAGCTAGTATTTTAACGTATCTGATTGATGGCCTTATGGTCCCTGTTGAATCTGGACTGCTGATTGAATTGTTCTTGTATGGTCTTGTTTAGTTGTTTGAAATTGGCGTGCTGAATGAATCGTTCTGGTATATTAAATAAATTTGTCTCTGTCATGAAACCTCTTTCAGTCTGGCTTTATTAAACCACCTAGTTGGTTATTGGTTAAGACATAGCAACATTTTTGCTTAATCGATTGATAGTGATTTGTGCTGAAACAAACAATACCAACTCATTAGCGTGTGGTACTTCTCTAGTCCCCTGAAGAAAATATAGCTATTTTGCTTGTGGTTTGAGTTGTACTTTTATAAATAAAATATATTTTTTTAATTCTGAAAAAAAGCATACTTATTATTTGAATCTTGAGTTGCAGTTGAATTTAATTGAAAGCATAATTTGAAGTCCACATGCAAAGACTTATTATGCGTGATTCTGGACATATTCTCCTTTTCATTTCACAACATATTTATCTTGTGAATACATAAAAAATGAACAGCTGGCAGTGCTTTTCCACATGTAAATGGATGATTTCATTTGTTACCAAACTTAGTAAAATTCCAGATCTTGATAATTTCCATTTGTTTCTTAAACTTGGTAAAATTTCAGGTCATGATAATTGACTACAAATTAACTTACCCAAGTGGGACTGCAACAGCTGTGCTTATAAATGGATTCCACACACCTCATGGGGATGCAATGGCAAAGTATGTGGTTCTCTAACATAACTCATAATGAGTTCTACTATTCATTATAAAATTTCAGTTAACTGAATGTGTTTTTTGGCACATCAGGCAGCAAGTAAATGGATTCACCAAATATTTTGCTATGAGTTTCTTTTGGAGCTTCTTCCAGTGGTTTTACTCTGGTGGAGACAATTGTGGGTTCTCGCAGTTTCCAACGTTTGGACTAAAAGCTTGGCAACAAACGTAACAACAATCACTTAGCTCATTATTCTATTAAATAAATTTTGACCAACAATAGTGTCACCTGATTTGTTCAAAAAACAAGTTCATCTGATTCAAAACTTTTTGGGTTATCAGATTCTTCTTCGATTTCAGTTTCACATATGTTGGGGCAGGGATGATTTGCTCCCACCTTGTTAATCTGTCTCTCCTACTCGGCGCCATTCTCTCATGGGGAGTAATGTGGCCACTGATCAGTGATTTGAAAGGGGATTGGTATTCAGCAGATATACCTGAAAGCAGCATGAAAAGCCTGCAAGGGTACAAGGTTAGTTTCGTCATTTTATTTTGGTAGTGTACAAGTATAGTATGATCTTTTGATTCTTACCACCTCATATATATTCTTTAGGCCTTCATCTGTGTAGCTCTCATCCTAGGTGATGGCCTATACAATTTTGTGAAGATAGTTGCACTCACTATTAAGAATCTGTTTGATAGCTCAAAACTGAAGAATGCAAAGAAGGGTAAATAATCTGACAGAACTCAATATGACCTTTCTAGTTTATATATGATCTGATATAAGGTGTATTCCACTTACAGGGGAAGACATGCCAGTGCTCGATGAACTTCATCGTAATGAAGTTTTTACAAGAGACAATATTCCTTCCTGGCTAGCCTTCTCTGGTTATCTTGGATTAACTTTTATTGCAGTAATTGCCATTCCCATGATGTTCCATGAGATGAAGTGGTATTATGTTGTCATAGCATACTTATTGGCGCCTGCCCTTGGTTTCTGCAATGCCTATGGAGCAGGCCTAACTGACATCAATATGGCCTACAATTATGGAAAGATTGCCCTCTTCATTCTTGCAGCCTGGGCTGGGAAAGACTCTGGTGTAGTTGCTGGCCTAGTAGGCTGTGGTTTGGTGAAATCGCTGGTGTCCATATCTGCTGATCTGATGCATGATTTCAAGACAGGACATCTAACATTAACATCACCGAGATCGATGATTATTGCTCAGGCCATTGGAACTGTCATGGGTTGTGTAATTTCACCACTAACGTTCTTCTTGTTCTACAATGCCTTTGACATTGGCAACCCGGAAGGGTACTGGAAAGCACCATATGCTCTAGTCTACCGAAACATGGCGATTCTTGGTGTTGAGGGCTTCTCTGCTCTGCCCCAGCATTGCTTGCAGCTCTGCTATGGGTTTTTTGGCTTTGCAGTGGCAGCTAACCTTACGAGGGACCTTTGCCCACCGAAGTATGGGAGATGGGTTCCCCTACCGATGGCAATGGGGGTTCCTTTCCTGGTTGGTGCAAGCTTTGCCATCGACATGTGTATCGGGAGCCTGATAGTCTTCACCTGGCATATAATTGACAAAAGCAAAGCAGCACTAATGGTGCCAGCAGTTGCATCTGGTTTGATATGCGGGGATGGTCTTTGGATCTTCCCTGCGTCCTTGCTTGCTTTGGCCAAGATCAGCCCACCAATGTGCATGGCATTTAGGTCTACAAACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014629