Os07g0563800

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Revision as of 08:41, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0563800| Description = Arf GTPase activating protein family protein| Version = NM_001066534.1 GI:115472800 GeneID:4343612| Length = 5770 bp...")
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Gene Name

Os07g0563800

Description

Arf GTPase activating protein family protein

Version

NM_001066534.1 GI:115472800 GeneID:4343612

Length

5770 bp

Definition

Oryza sativa Japonica Group Os07g0563800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:23232293..23238062

Sequence Coding Region

23232743..23232896,23233037..23233092,23233170..23233439,23233545..23233723,23233883..23234111
,23234722..23234917,23235465..23235555,23235658..23235712,23236549..23236639
,23237103..23237161,23237737..23237787

Expression

GEO Profiles:Os07g0563800

Genome Context

<gbrowseImage1> name=NC_008400:23232293..23238062 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:23232293..23238062 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaacgagaaggcctccgtctccaaggagctcaacgccaagcacaagaagatattggaaggcctcctgcggctgcctgagaatagagaatgtgcagactgcaagtcaaagggtcctcgatgggcaagtgtaaatcttgggatctttatatgcatgcagtgttctggaattcatagaagcctcggggtacatatatctaaggtaagatcggctaccctggatacatggctgccagagcaagttgcatttattcaatcaatggggaatgaaaagtcaaatagctactgggaagcggagctgccccctaactatgatagggttgggatagagaacttcatccgtgcaaaatacgaggacaagagatggataccgaggaatgggtcatcaagaccatcatctggtgctagagatgagaagagctcagagtcacaaactagtgttaacaggggtggccataatcaaagatcttcatttgagcaacaccgcacttcaccagctgcagtgagcaaaattgctccagtggtttctaggacgcccacccaggcaccacatcagccaaaagcacaaccatcagttcccaaggtttcacctcctcaacccgagaaatcacctcctaatgcaacaccaccaaaggttgagaggccatcagttgcaccacctcctaaggttgactatgcaactgatctcttcaacatgttatcaatggatggaacaaccgagaaagaagcagagtcatcttctaatgatgatagtgcatgggagggcttccagtctgcagagccagtacctagctcagacaaaaaggattctgctaagccagtagaaagtaagccccagtctacatcaggcatagaggacttgtttaaagattcaccagctgtgacagtatcctcagctccagctgccccacaagtaaatgtgaagaatgatatcatgagtctgtttgagaagtccagtatggtttcgccatatgctgtccagcagcagcaacttgcttttatgaccccccagcagcttgcacttctgtctcagcagcaagctttactaatggctgctcttaaagctggaaatgcaccccaaatgattccagggaacgccagtctgctaaatggtaatggttctaatcctgccaatggaggcttgccttcacaaagctggacaaatcttgcttatcagaatcctgggttggctccagtagcagcacagaatggtgccaccaaggttgcgaacaacaatcaggaattctcttttgggaatttcaattttagtacacctggagcatacaacactagctcatctgtcccagcaaatggggccgcaagtgcagctgctaacaagagcacatccccgacctcttcttccctcccctctcaatcaggcaaagaatatgatttttcatcattaactcaaggactgttctccaagcgatga</cdnaseq>

Protein Sequence

<aaseq>MNEKASVSKELNAKHKKILEGLLRLPENRECADCKSKGPRWASV NLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNEKSNSYWEAELPP NYDRVGIENFIRAKYEDKRWIPRNGSSRPSSGARDEKSSESQTSVNRGGHNQRSSFEQ HRTSPAAVSKIAPVVSRTPTQAPHQPKAQPSVPKVSPPQPEKSPPNATPPKVERPSVA PPPKVDYATDLFNMLSMDGTTEKEAESSSNDDSAWEGFQSAEPVPSSDKKDSAKPVES KPQSTSGIEDLFKDSPAVTVSSAPAAPQVNVKNDIMSLFEKSSMVSPYAVQQQQLAFM TPQQLALLSQQQALLMAALKAGNAPQMIPGNASLLNGNGSNPANGGLPSQSWTNLAYQ NPGLAPVAAQNGATKVANNNQEFSFGNFNFSTPGAYNTSSSVPANGAASAAANKSTSP TSSSLPSQSGKEYDFSSLTQGLFSKR</aaseq>

Gene Sequence

<dnaseqindica>5167..5320#4971..5026#4624..4893#4340..4518#3952..4180#3146..3341#2508..2598#2351..2405#1424..1514#902..960#276..326#ggaggggaggagaagcgaagcgaggaaggtcaagccggggagggcacgcacgcacagatccctcccctctcctcgctgcccatctctctctctctcttcccctcgacgcggcgagatcaggaggaggaggaggagaggggggaagggaggaagggaggctgagatcccgaggccccccaccggagacggcgaatcctggtccggcgcctggtttgcccccggattcgggaggagtttccgttcggggtcgagggatttcgggggcgcgcgcagccatgaacgagaaggcctccgtctccaaggagctcaacgccaagcacaagaaggttcgtatatcctcccgttccgttatatgtcgatttgttcggatcggaggctggccctttcgatttgggttggaaagctacggcagagtcgattcggcgtgcgatttcgtttgttgttaggtgagggagatttgggatccgcgatttcgtgggttcctgatctccccgctcctgaattgcgcgcggttgctttgcaactctttttgtggcgttaggaagagcgtggcgcagatcggaattcgcttcctttgttttgccgttattatgaatcggggagcgggcgcttttgctaatttaagcttgattatatggattttgtgaattgttcgactggtggaaatcgttatttgaaaaattgtttgtaattttatagtaggtatccttctcaatcgtggcaataaaaagttaaacaattcgcagtcaactgtacaagcaacctagctatcttcgttgctacaacatattgttaccattttgattttttcatgacccgctcaagcctcaacaatattaggtattgttcatgaagtaccctgtcttatttaccatgtttatggctcgtccttgatttccagatattggaaggcctcctgcggctgcctgagaatagagaatgtgcagactgcaagtcaaagtgagtgatcctgtgcaattggttctccaaaagatggctattgatgcattatacaagtttatgttttatcattagctttgctgctaagagtactttcacttgatgacgttgttttttatagaagttaacattctgattcattgtccgcttgctgatttgtgttgagcaagttctatggcatttggagggcctctagtaatctagaagcaattatttaagatatttattcttattgcttcatcactggtttgttgcatccaacatgttaaccatctattcctggaaatgaaaattttctgttctatttattgacttatatagtcagtatagttggttaaacctcctctccatcatgtctaatgttacctgtaaattcatctctgagcatgtaatgttagaactgataggtagacacttgcatgtgccatagttcttgtcaactgactgtttccccatttttcaggggtcctcgatgggcaagtgtaaatcttgggatctttatatgcatgcagtgttctggaattcatagaagcctcggggtacatatatctaaggtcagtgaattatgtgcatgagttcaactgtttattttcgaactcagtatgcccacttttttttttctccttcatacaagttctgacaaatttggcttgaaacacaacttgagtactttgaatgaccaacttttcatgaaaatttggtagctgctctatcagtgtcattttttttatagtatcaaagtatattatgcttgtttctttcagttcattgcatcctggctaatgtaagtttatataagattataaacataacataaattcaacatggtagaatggccatcaatccatcatatgcgaaaccgggctgtttggtttggtgaccagagtttgccataccaaaccttaggcgtgctacactttaatagcctagagcctggtttgttacaactgtgacatgccacactttattagctcttttcacatgtcgtacactcaatttggtgcctaactttgccacacttgtggccaacgatttgttggccacactttgtgtggcaaaccacacctttggtagttgtggcaaagatagtcatcaaccaataagcttagctatctggattctgcaacaaccttgacttcgaagcttctgagctggctggcttatctttttcatgtactttgagaactcgtgctcacaattttttactggtcatcattgcaccaaattgtttgtgtatattacaaacagagaacgtgaaacagctatgtatctgttttatgtttaattctttgagatgcatttctttctttcatgtggcctcgccttcaaatctatatcaatagcatgcggtttttgtctatttaatgaaccatttttttccctgacgcaggtaagatcggctaccctggatacatggctgccagagcaagttgcatttattcaatgtatgtattactccctgaccagaaatttttaatatttgccatcaaacaaaggggtaatgcagttctcaatgatgattgtattcccgtcttcacttctttcagcaatggggaatgaaaagtcaaatagctactgggaagcggagctgccccctaactatgatagggttgggatagagaacttcatccgtgcaaagtaatgaacctctccaactttcagtacctataaatctagtacaatccatttgtcttgctataaatctagtacaccaatgtaaatcacctgcctatccaaggcctcccatccccccgcgcaagcaaacaaatacaaaaccaaaataaaggtttaattttgctttttaatacttaccattcattaatgggggaatgaaaaggcagttgctccatccggttataaatatttaattctaaggacaagatttggtcaaatttctaaaattctgaccattaaaaaaaattctaaaatgcttagttttaaacacaaaaaatggccatcgatagatttgacttgaaatgtactgtcataatatcataaacttattggattttataaacttatcctaatataaaattggttgctggaattttaaaaggttgaccaaatctttgtgctaagtgtcaaacatttatgaccagagggagtaatttgtaggggtgtttatggatctaacctttggaacaatgtgttggactaatgttattaacttatgtctaaaatgtagatacgaggacaagagatggataccgaggaatgggtcatcaagaccatcatctggtgctagagatgagaagagctcagagtcacaaactagtgttaacaggggtggccataatcaaagatcttcatttgagcaacaccgcacttcaccagctgcagtgagcaaaattgctccagtggtttctaggacgcccacccaggtaatcctactggattatgacaagcttttcctaggtgttgattatcagttaagtttattgatacttgcctttggtagtagcatctttagatgtaaacagcttgagggatcgacactcttttcttgaagccgagctatatatattccaaattgtagttcttaattactatctgccacttcaatagttaatcgaaaatggagaacgatctataagtttcatatatgtgtgtgttatatgccttgcgcacaaactgtagatttccaaactgaaaaatgagaatgatcatgtgatagcgtgtatcatgctaatggatgatcatgtttatagttttgtttcttgtgcctgaccttgataacttgatgataattaatggtttcactttgcttacatgattgaaaacacattcttacaaccagtgatattttccacattaggttaataagtgttaagttaaagttggcacaatatccattgagtacttcaagtaatttggagacttaagttattattaagttttattttatacttgctgcattttgttgtgtaataatttattactagcttctaatagttttaatctggtacaactggtcaactgcattgaaatcaggcaccacatcagccaaaagcacaaccatcagttcccaaggtttcacctcctcaacccgagaaatcacctcctaatgcaacaccaccaaaggttgagaggccatcagttgcaccacctcctaaggttgactatgcaactgatctcttcaacatgttatcaatggatggaacaaccgagaaagaagcagagtcatcttctaatgatgatagtgcatgggagggcttccagtgtaagatattatgacttaacatttctattgaggaattattcttgttatatgagcatctttttatgaaatgttctgcgagtgcttcaccatattccttacttgcatactgtggagtatcttttaatttgggctcctgtgttctctttctcaattgttcagctgcagagccagtacctagctcagacaaaaaggattctgctaagccagtagaaagtaagccccagtctacatcaggcatagaggacttgtttaaagattcaccagctgtgacagtatcctcagctccagctgccccacaagtaaatgtgaagaatgatatcatgagtctgtttgagaaggtcagcgccagcattacttttactaatgcttttgtgaaatggctctgtcatttaaaagaaagagcacatctatggtttatctgaagaaatacgtgtattttgcagtccagtatggtttcgccatatgctgtccagcagcagcaacttgcttttatgaccccccagcagcttgcacttctgtctcagcagcaagctttactaatggctgctcttaaagctggaaatgcaccccaaatgattccagggaacgccagtctgctaaatggtaatggttctaatcctgccaatggaggcttgccttcacaaagctggacaaatcttgcttatcagaatcctgggttggctccagtagcagcacagaatggtgccaccaaggtaagggcttttagatcatctgtataaatatgtgttttactgtatgttcatcttttcatgtctttgttacttggcaggttgcgaacaacaatcaggaattctcttttgggaatttcaattttagtacacctgggtaagcaatattgcttgactagtttttggcaattaaaacttcataccacagcttacttggtcgcgaaagaaatttagatgtgctttgaggtcacaaatcatggcttagcttttctgatgcttacttttgttttgatgcagagcatacaacactagctcatctgtcccagcaaatggggccgcaagtgcagctgctaacaagagcacatccccgacctcttcttccctcccctctcaatcaggcaaagaatatgatttttcatcattaactcaaggactgttctccaagcgatgaacacttgctatacttggaaattaaacaaatgggcctgtatgcaacgatggacacagcagattttattagggggaaccgggggccttgtacactcttttatgaggcagcatttcttcttgtggatattacgacaccttgtagctgtcctggacaaataagaggaagaatatagcagctaattgcatatgttgtttcctacagctgaagagagtcgatattgttcatgatgccgatctctttgaatagaggacgccttgtggctttgttggacttacatttataagagcataatgcaactattttattctctttgttcatgacatagttacaatacgtgacgccgattattttctactgtaccatacttggattttgttattcacaaaacatttgattgtattattatgccaagtgagctattacacgcactgaaccaaacttaattccctg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0563800, RefSeq:Os07g0563800