Os07g0564000

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Revision as of 08:41, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0564000| Description = Conserved hypothetical protein| Version = NM_001066535.1 GI:115472802 GeneID:4343613| Length = 3735 bp| Definition ...")
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Gene Name

Os07g0564000

Description

Conserved hypothetical protein

Version

NM_001066535.1 GI:115472802 GeneID:4343613

Length

3735 bp

Definition

Oryza sativa Japonica Group Os07g0564000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:23251064..23254798

Sequence Coding Region

23251089..23251193,23251614..23251778,23252106..23252297,23252851..23252929,23253020..23253144
,23253312..23253393,23253607..23253668,23254099..23254515

Expression

GEO Profiles:Os07g0564000

Genome Context

<gbrowseImage1> name=NC_008400:23251064..23254798 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:23251064..23254798 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggcgcaggcgacccaccggcgagccggagaccgcggcggcggtggcgacggcgggagctcctccgcctccatcgccaagcacctcgcaaaccagagccaggtcttgaagtggctgcaagatttctctgataaggtggaggagagagctaaaggagccgctgcagaagtcaatgtgttgttagatgaggctggggcgctggagctggatatgaagaccgcgatgatctccttcaacaacctgacccgccaaaggttcattgaacataaaatttcagatgaagatagtatgcatctgaaaacaacggagagtatgcatggttctctgcaatcccaagtgccagctcaggattatgaacgtgatattttaccaagatacaaagaagcattacacataggactttcttcctgtaaggaccacttccgaagcaagggacgctctaccacctctgtgttcagggctatgtctgcatatggccctcttccacatataattggttctgaagagtacattcatgataacagctgtggtctggcagatgatatgcagcctctaagtgatgacttcagttggttgcgggagtttcaaagtgagtcttcagactcacggactgctgatatctctgagtctcaaattttcggggctcagcgaggttatgagaagggggaaactgactctgtggtttctgctgcacgagaattcaaggcaatgctggaggctgcacttgttaatccctataagttctatgatgatgcaactattacagcgcaagatgcttctgtagagaagaagataagcacaagtgaggaccaagttatgctgacagggacaagtgaagcaccgagtggaagatcagcacaagaagataactctgaacagacaggactttttgcaagcttgcaaagcgcagatgccaatcctcatgacatctattctgctttggttagagaaggcctgtttgatactggtgatgagattctgtctatggatagaggggagtctgctgatactcctatttcaggcctagcgtcaggtttagcaaatcttggcactgctgatccagctgaaaggggctactcaataaacgagactacaaatgaggagggatacttgattgaaggggatgatccatcaccatcaaacaaagacgaacaagatgaccaaactgatgcacatggtgtgtcttcgccagagccagaagatggtgtttctagaccatcctag</cdnaseq>

Protein Sequence

<aaseq>MEAQATHRRAGDRGGGGDGGSSSASIAKHLANQSQVLKWLQDFS DKVEERAKGAAAEVNVLLDEAGALELDMKTAMISFNNLTRQRFIEHKISDEDSMHLKT TESMHGSLQSQVPAQDYERDILPRYKEALHIGLSSCKDHFRSKGRSTTSVFRAMSAYG PLPHIIGSEEYIHDNSCGLADDMQPLSDDFSWLREFQSESSDSRTADISESQIFGAQR GYEKGETDSVVSAAREFKAMLEAALVNPYKFYDDATITAQDASVEKKISTSEDQVMLT GTSEAPSGRSAQEDNSEQTGLFASLQSADANPHDIYSALVREGLFDTGDEILSMDRGE SADTPISGLASGLANLGTADPAERGYSINETTNEEGYLIEGDDPSPSNKDEQDDQTDA HGVSSPEPEDGVSRPS</aaseq>

Gene Sequence

<dnaseqindica>26..130#551..715#1043..1234#1788..1866#1957..2081#2249..2330#2544..2605#3036..3452#agttcgcaccatccggcggaggaagatggaggcgcaggcgacccaccggcgagccggagaccgcggcggcggtggcgacggcgggagctcctccgcctccatcgccaagcacctcgcaaaccagagccaggtacctcgtgagcacgcgcccgcctttccctctccatcagatcgtttgctgcttgctgccccggaggttctgtgatgctgccgattcctgcacacgtttggctcaaattctccacgaattcgtggcttctcctctcggattttcgcccatactcatcgcaagaatcaagcgcgcgtagccaatcgcaccatcgcggttacagttcagcgattgcctcctcgattgcggctgcggctgctcttttgcgctgctagatccacctgaaccatgccggctcacagtgttctgcagaaacctgagaatgcgtgctggcatgctcgatttcgttgtctggctctgatttctggaaggctctgattgcaactgtacatctcagtatcttggctgctctcgtcatgtgttgtcgcgtttcctgctcaggtcttgaagtggctgcaagatttctctgataaggtggaggagagagctaaaggagccgctgcagaagtcaatgtgttgttagatgaggctggggcgctggagctggatatgaagaccgcgatgatctccttcaacaacctgacccgccaaaggttcattgaacatgcaagtagtggttccaaatctgtatattgcacttgtctttggatgcctctagtctagaaagttatgcttgctttgtgattgatttgtttatatcagatgacaatatacttaacttttggctgtagtacacccttctatggtcaagtgtcgtatacttgttttgattacttttgtaaaagacataaatttcaaatttacataaattcaaatttatgatatctcctcattccctcagtggaaattgcttgggacacatttctgtactttgcctcaaggagatgaataacatatcaccgctcactgctgcaagtgcgtcttcaactgcagaaaatttcagatgaagatagtatgcatctgaaaacaacggagagtatgcatggttctctgcaatcccaagtgccagctcaggattatgaacgtgatattttaccaagatacaaagaagcattacacataggactttcttcctgtaaggaccacttccgaagcaagggacgctctaccacctctgtgttcagggtaatggccttacttgcagttcttgatgaaatatttacccccccccccccctcaaacttttccctgcaaattaatgccataatttgtcattactaaaattttgttgcggaggcttgtttaggttgatgccaactagttccagtttttagctgccaaatattatctgaatctttattatttttcttccaaaattctgtcaagattcccatccttttggcacattatggtaaattcattttcttgccgaaacacttccaattttcagcgacctattagatgaccaaattttggaacacattgccaatgcaatttttaccaccaaccctccccctggtcacccagatttcagaagcaaattaactaaaaagcttgctgtgaagtaaatattgccaatgtttttccagcaaactaattatatgccaaaactgacaaaccaaattttggtagttctgtttggtaactgcagctggcattatttcagaaattctatagttcacaagcgtttgttctatggtagcatttccaaattatctttgttgcttgactcttgaaggctatgtctgcatatggccctcttccacatataattggttctgaagagtacattcatgataacagctgtggtctggcaggtataagtattattcaattgtttttctttggaaacaattttatactttgtgaatatactcatgtgagcttttcaattttgtttcaaatagatgatatgcagcctctaagtgatgacttcagttggttgcgggagtttcaaagtgagtcttcagactcacggactgctgatatctctgagtctcaaattttcggggctcagcgaggttatgagaaggtacagtgtatttatagtttgcggcaagaatgatgtgttctggtactgatttgtttgctgtttcatatggagtttgtttaaactctaatcaatatatagtactcctagttgacgttgacactaatagtcttccagaccattaatcatgtgtgcgtgtttcaatccagggggaaactgactctgtggtttctgctgcacgagaattcaaggcaatgctggaggctgcacttgttaatccctataagttctgtatgtgattctttccctacttccgtcctaattttgacatcttataatacctgtatagtgtgttaactataatcttcttcatttattatgctttgtcctctctttgaaaagttatctttctttcttagtccaatttagatgtagtttttttataaaaaaaaatccgttatgattttccttttcattgattttagtagaccgtgcttttcacagatgatgatgcaactattacagcgcaagatgcttctgtagagaagaagataagcacaagtgaggtacagcataacctttctgtggcattgtagtttggactatgggtatcttcaaccgatatttctgtctggctaaaagttgtgtcataaccctgagtccctgatgacttgttcacatgactcacatctggagtcctactcccaaaacatcaaaaaaaaaaaaaaaacttgcatgtgttaattcttctctcatcttttaaatttccctttagttgtaagatttcatacgaagctcaacatgtttctaattgtgagctcttgcttttgattgttcactctggtccagtggatgtgtttttttttgtccaaaagtatatgctgatattgctatttggggaatatgataccaataaaaggagatatttccctcattccaaatttccagttttaaataatttatgaccctaacaaagttgccttgtgatgattctaggaccaagttatgctgacagggacaagtgaagcaccgagtggaagatcagcacaagaagataactctgaacagacaggactttttgcaagcttgcaaagcgcagatgccaatcctcatgacatctattctgctttggttagagaaggcctgtttgatactggtgatgagattctgtctatggatagaggggagtctgctgatactcctatttcaggcctagcgtcaggtttagcaaatcttggcactgctgatccagctgaaaggggctactcaataaacgagactacaaatgaggagggatacttgattgaaggggatgatccatcaccatcaaacaaagacgaacaagatgaccaaactgatgcacatggtgtgtcttcgccagagccagaagatggtgtttctagaccatcctagccatgctgatattggttgatttcttctcgagtgcagttcattctgtcaaaatctactgtagacgctggtgaagcaactgaatggcaatgatttagacgaggaacacacttttgctgccatgtgctgagtgctgtagactaagaaattatatactccctttgtttcaggttataagacgttttgatttttggtcaaagtcaggacaaatttgtagaaaaaaatagtaacattttcaagccaggacaaatttattatgaaaatatatttaattattgatttgatg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0564000, RefSeq:Os07g0564000