BGIOSGA014720

From RiceWiki
Revision as of 15:57, 22 July 2012 by 124.16.129.48 (talk)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA014720

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014720, complete gene.

LocusTag

OSJNBB0070J16.5

Ensembl Transcript ID

BGIOSGA014720-TA

Ensembl Protein ID

BGIOSGA014720-PA

Length

3084

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:24404263..24407346

Sequence Coding Region

24404263..24407346

Genome Context

<gbrowseImage1> name=IndicaChromosome04:24404263..24407346 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:24404263..24407346 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGCTCCGCCGCCCGCGTCCGCCTCGCGCCCAAACCGAGAGCCAACCAGCCTCCTCCTCCTCCTCCTCCTCCGTTTCGGCTCGCCCCCGCCGCCGTCGCGGCGCTCGGATCCCACCCCGACGCCTCCTCCTACGCCAGCCTCCTCTCCTCCCTCTCCAGAGAGTGCCACGCCCGCCACCCGTTCGACGCAAGTCCCCCGAGAGCCCGCCACTCGCAGACATGCAGGGCCTTGCACGGCCGGATACTGCGCGGCGGATCACCCCTCCTGGGACGCCTCGGCGACTCGCTCGTCGAACTGTACTGCAAGTCCGGCCGTGTGGGCTATGCCTGGAGCGCCCTGGGATACGCCGGGGAGCGGGCTTCAGGCGCGGCGAGCTCCCTGCTGTCCTGCCATGCGCGGTCGGGGTCCCCTGGGGATGTTCTCGGCGCGTTCCGGTATATCAGGTGCACTGCCGGTGGCCGGCCGGACCAGTTTGGTCTTGCGGTCGTTCTGTCGGCGTGTTCCAGGGTGGGTGTTCTTGCTTACGGCAGGCAGGTGCATTGCGATGTGGTCAAGAGCGGGTTCAGTTCCAGTGTCTTCTGCGAAGCGGCGTTGGTGGACATGTATGCCAAATGCGGTGATGTGCCCAATGCTCGCAGGGTGTTTGATGGGATTGCTTGCCCAGACACAATATGCTGGTCAAGCATGATTGCTTGCTATCATCGAGTTGGATGCTACCAGGAAGCGTTGGCTTTGTTTTCTAGGATGGATAAGATGGGCTCTGCTCCGGATCAAGTGACACTTGTTACCATCATTTCCACACTTGCAAGCTCGGGCAGGCTGGACCATGCAACAGCTTTGCTGAAGAAGATGCCTACACCAAGCACAGTTGCTTGGAATGCTGTCATCTCTGGTCACGCACAAAGTGGACTCGAGTTTAATGTGCTTGGCTTGTACAAGGATATGAGGAGCTGGGGGTTATGGCCCACTAGATCAACTTTTGCAAGCATGCTAAGTGCAGCGGCTAACATGAAAGCTTTTGTTGAAGGCCAGCAGATGCATGCTGCAGCAGTAATGCATGGCTTGGATGCAAATGTATTTGTGGGAAGTTCTCTGATCAACCTGTATGCTAAATGTGGCTGCCCCAGTGACGCGAAGAATGTTTTCGACTTGTCCTGTGAAAAGAACATTGTCATGTGGAACGCTATGCTCACAGGTTTTGTTCAGAATGAATTGCCAGAGGAAGCTATTAGAATGTTTCAGTATATGATGAGGTATACCCTTCAAACCGATGAATTTACGTTTGTCAGTATTCTTGGTGCATGCACCTACTTGAGTTCCTTTTATCTGGGAAAACAAGTACATTGTGTAACAATCAAGAACTGCATGGATATAAGCTTGTTTGTTGCTAATGCAACACTAGATATGTACTCAAAATATGGAGCAATTGGTGATGCAAAGGCACTATTCAGTCTAATCCCTTACAAGGATAGTATATCCTGGAATGCCCTTACAGTAGGACTTGCACAGAACCTAGAGGAGGAAGAAGCAGTGTGTATGCTCAAAAGGATGAGGCTGCATGGTATAACACCCGATGATGTATCTTTTTCTACTGCAATTAATGCTTGTTCCAATATCCGAGCCACTGAAACTGGAAAGCAGATCCATTGCCTGGCCATCAAATATGGTATCTGCTCAAATCATGCTGTTGGTAGCTCTCTGATTGACTTGTATTCAAAGCATGGAGATGTAGAGTCTTCTAGGAAGATTTTTGCACAAGTAGATGCGAGTAGTATAGTGCCAATAAATGCTTTAATTGCAGGTTTTGTGCAGAACAATAATGAAGATGAAGCAATACAACTGTTTCAGCAAGTTCTAAAAGATGGTTTAAAGCCCTCCAGTGTTACATTTTCAAGCATTCTTTCTGGCTGTAGTGGATCTCTTAATTCAGCTATTGGCAAGCAAGTTCATTGTTACACACTGAAGTCTGGTGTTCTATATGATGATACTCTCCTTGGTGTTTCATTGGCTGGAATATATTTGAAGTCCAAAATGCTTGAGGATGCAAATAAACTCTTAACAGAAATGCCAGATCACAAAAACCTGTTTGAGTGGACAGCTATCATTTCAGGGTATGCTCAAAATGGTTATGGTGATCACTCTTTGGTGTCATTTTGGAGAATGCGTCATTGTAATGTTCGCTCGGATGAGGCAACATTTGCAAGTGTTCTTAAAGCTTGTTCGGATGTAACGGCTTTTGCAGATGGGAAAGAGATACATGGCCTCATCACTAAATCTGGGTTTGGTTCTTATGAAACTGCAACTAGTGCCCTCATAGACATGTATTCCAAGTGTGGGGATGTCATTTCTTCCTTTGAAGCCTTCAAAGAATTGAAAAACAAACAAGATATAATGCCATGGAACTCTATGATTGTTGGATTTGCAAAAAATGGTTATGCTGATGAGGCACTTCTGCTTTTCCAGAAGATGGAGGAGTTGCAGATAAAGCCTGACGAAGTTACATTCCTAGGTGTCCTAATTGCTTGTACTCATTCTGGGCTAATTTCTGAAGGTCGGCATTTCTTTGGTTCCATGAGAAAAGTTTATGGATTAACACCTAGACTAGATCATTATGCCTGTTTTATTGATCTCCTTGGACGTGGTGGTCATCTTCAAGAGGCCCAAGAAGCTATTGACCAGTTGCCTTTCAGACCTGATGGTGTGGTCTGGGCTACGTATCTTGCAGCATGCAGAATGCACAAGGATGAAGAAAGGGGGAAAATTGCAGCAAGGAAACTTGTTGAGTTGGAACCACAATACTCATCTACATATGTGTTGCTTTCAAGCTTACATGCTGCTACTGGTAACTGGGCTGAAGCTAAGGTAACCAGAGAATCAATGCGAGAAAAAGGAGTGGCAAAATTTCCAGGATGTAGTTGGATTACCGTGGGAAACAAGACAAGCTTGTTTCTTGTACAGGATAAATACCACCCTGACAATCTTAGAATCTATGAAATGCTTGGTGATCTAACTGGAATGATGAAGAAAGATAACGATATTGATGAGTATGGTCTACTTTATTCAGCTGAAATGCTTGCTTGA</cdnaseq>

Protein Sequence

<aaseq>MRSAARVRLAPKPRANQPPPPPPPPFRLAPAAVAALGSHPDASSYASLLSSLSRECHARHPFDASPPRARHSQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRIYEMLGDLTGMMKKDNDIDEYGLLYSAEMLA</aaseq>

Gene Sequence

<dnaseqindica>1..3084#ATGCGCTCCGCCGCCCGCGTCCGCCTCGCGCCCAAACCGAGAGCCAACCAGCCTCCTCCTCCTCCTCCTCCTCCGTTTCGGCTCGCCCCCGCCGCCGTCGCGGCGCTCGGATCCCACCCCGACGCCTCCTCCTACGCCAGCCTCCTCTCCTCCCTCTCCAGAGAGTGCCACGCCCGCCACCCGTTCGACGCAAGTCCCCCGAGAGCCCGCCACTCGCAGACATGCAGGGCCTTGCACGGCCGGATACTGCGCGGCGGATCACCCCTCCTGGGACGCCTCGGCGACTCGCTCGTCGAACTGTACTGCAAGTCCGGCCGTGTGGGCTATGCCTGGAGCGCCCTGGGATACGCCGGGGAGCGGGCTTCAGGCGCGGCGAGCTCCCTGCTGTCCTGCCATGCGCGGTCGGGGTCCCCTGGGGATGTTCTCGGCGCGTTCCGGTATATCAGGTGCACTGCCGGTGGCCGGCCGGACCAGTTTGGTCTTGCGGTCGTTCTGTCGGCGTGTTCCAGGGTGGGTGTTCTTGCTTACGGCAGGCAGGTGCATTGCGATGTGGTCAAGAGCGGGTTCAGTTCCAGTGTCTTCTGCGAAGCGGCGTTGGTGGACATGTATGCCAAATGCGGTGATGTGCCCAATGCTCGCAGGGTGTTTGATGGGATTGCTTGCCCAGACACAATATGCTGGTCAAGCATGATTGCTTGCTATCATCGAGTTGGATGCTACCAGGAAGCGTTGGCTTTGTTTTCTAGGATGGATAAGATGGGCTCTGCTCCGGATCAAGTGACACTTGTTACCATCATTTCCACACTTGCAAGCTCGGGCAGGCTGGACCATGCAACAGCTTTGCTGAAGAAGATGCCTACACCAAGCACAGTTGCTTGGAATGCTGTCATCTCTGGTCACGCACAAAGTGGACTCGAGTTTAATGTGCTTGGCTTGTACAAGGATATGAGGAGCTGGGGGTTATGGCCCACTAGATCAACTTTTGCAAGCATGCTAAGTGCAGCGGCTAACATGAAAGCTTTTGTTGAAGGCCAGCAGATGCATGCTGCAGCAGTAATGCATGGCTTGGATGCAAATGTATTTGTGGGAAGTTCTCTGATCAACCTGTATGCTAAATGTGGCTGCCCCAGTGACGCGAAGAATGTTTTCGACTTGTCCTGTGAAAAGAACATTGTCATGTGGAACGCTATGCTCACAGGTTTTGTTCAGAATGAATTGCCAGAGGAAGCTATTAGAATGTTTCAGTATATGATGAGGTATACCCTTCAAACCGATGAATTTACGTTTGTCAGTATTCTTGGTGCATGCACCTACTTGAGTTCCTTTTATCTGGGAAAACAAGTACATTGTGTAACAATCAAGAACTGCATGGATATAAGCTTGTTTGTTGCTAATGCAACACTAGATATGTACTCAAAATATGGAGCAATTGGTGATGCAAAGGCACTATTCAGTCTAATCCCTTACAAGGATAGTATATCCTGGAATGCCCTTACAGTAGGACTTGCACAGAACCTAGAGGAGGAAGAAGCAGTGTGTATGCTCAAAAGGATGAGGCTGCATGGTATAACACCCGATGATGTATCTTTTTCTACTGCAATTAATGCTTGTTCCAATATCCGAGCCACTGAAACTGGAAAGCAGATCCATTGCCTGGCCATCAAATATGGTATCTGCTCAAATCATGCTGTTGGTAGCTCTCTGATTGACTTGTATTCAAAGCATGGAGATGTAGAGTCTTCTAGGAAGATTTTTGCACAAGTAGATGCGAGTAGTATAGTGCCAATAAATGCTTTAATTGCAGGTTTTGTGCAGAACAATAATGAAGATGAAGCAATACAACTGTTTCAGCAAGTTCTAAAAGATGGTTTAAAGCCCTCCAGTGTTACATTTTCAAGCATTCTTTCTGGCTGTAGTGGATCTCTTAATTCAGCTATTGGCAAGCAAGTTCATTGTTACACACTGAAGTCTGGTGTTCTATATGATGATACTCTCCTTGGTGTTTCATTGGCTGGAATATATTTGAAGTCCAAAATGCTTGAGGATGCAAATAAACTCTTAACAGAAATGCCAGATCACAAAAACCTGTTTGAGTGGACAGCTATCATTTCAGGGTATGCTCAAAATGGTTATGGTGATCACTCTTTGGTGTCATTTTGGAGAATGCGTCATTGTAATGTTCGCTCGGATGAGGCAACATTTGCAAGTGTTCTTAAAGCTTGTTCGGATGTAACGGCTTTTGCAGATGGGAAAGAGATACATGGCCTCATCACTAAATCTGGGTTTGGTTCTTATGAAACTGCAACTAGTGCCCTCATAGACATGTATTCCAAGTGTGGGGATGTCATTTCTTCCTTTGAAGCCTTCAAAGAATTGAAAAACAAACAAGATATAATGCCATGGAACTCTATGATTGTTGGATTTGCAAAAAATGGTTATGCTGATGAGGCACTTCTGCTTTTCCAGAAGATGGAGGAGTTGCAGATAAAGCCTGACGAAGTTACATTCCTAGGTGTCCTAATTGCTTGTACTCATTCTGGGCTAATTTCTGAAGGTCGGCATTTCTTTGGTTCCATGAGAAAAGTTTATGGATTAACACCTAGACTAGATCATTATGCCTGTTTTATTGATCTCCTTGGACGTGGTGGTCATCTTCAAGAGGCCCAAGAAGCTATTGACCAGTTGCCTTTCAGACCTGATGGTGTGGTCTGGGCTACGTATCTTGCAGCATGCAGAATGCACAAGGATGAAGAAAGGGGGAAAATTGCAGCAAGGAAACTTGTTGAGTTGGAACCACAATACTCATCTACATATGTGTTGCTTTCAAGCTTACATGCTGCTACTGGTAACTGGGCTGAAGCTAAGGTAACCAGAGAATCAATGCGAGAAAAAGGAGTGGCAAAATTTCCAGGATGTAGTTGGATTACCGTGGGAAACAAGACAAGCTTGTTTCTTGTACAGGATAAATACCACCCTGACAATCTTAGAATCTATGAAATGCTTGGTGATCTAACTGGAATGATGAAGAAAGATAACGATATTGATGAGTATGGTCTACTTTATTCAGCTGAAATGCTTGCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014720