Os07g0564800

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Revision as of 08:42, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0564800| Description = Protein of unknown function DUF707 family protein| Version = NM_001066541.1 GI:115472814 GeneID:4343619| Length = 59...")
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Gene Name

Os07g0564800

Description

Protein of unknown function DUF707 family protein

Version

NM_001066541.1 GI:115472814 GeneID:4343619

Length

5985 bp

Definition

Oryza sativa Japonica Group Os07g0564800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:23308524..23314508

Sequence Coding Region

23308717..23308848,23309135..23309164,23309259..23309324,23309758..23309844,23310605..23310658
,23311433..23311499,23311706..23311759,23311836..23311952,23312273..23312374
,23312521..23312639,23312703..23312786,23312957..23313091,23313207..23313242
,23313318..23313407

Expression

GEO Profiles:Os07g0564800

Genome Context

<gbrowseImage1> name=NC_008400:23308524..23314508 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:23308524..23314508 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagactgcggttgcatctgctgattctttgcttgatcattttatttctggtttataacatggcgagttaccaacataaacagacaaagttggaagcaaaatcccgtccatttgatacaattacggtgtctgacaaagtgtcttctaaggtgtctaaaagatctgccaatagggttggttttttaccccatggtatagtggaaccttactctgacatggagttgaagccattatggctcacaagaagtgcgcaatcaaaggattctagccagaaggatcggtgcttgcttgccatccctgctggtatagatcagaaaagaagtgtggatgctattatgaagaagtttcttccagagaattttacagttatgttgttccactacgatggtaatgttgatgggtggaacgatctaccttggagcaaaagtgtgatacatatagctgcttctaaccagacaaaatggtggtttgcaaaaagattcctccatccttctgttgtctccatgtacgagtatatatttctttgggatgaagatctggaagtagataactttcacccaaggaggtacttgaatatagttaaatcagaagggctagagatatctcaaccaggtcttgatcctaaattgtctgaaattcatcatcggataactgttcgtaaaaaggggtggagtttccacagaaaagttaatcggggaaacaaagattgtgcaaaagagggaccgccttgttctggatgggttgagggcatggcaccagttttctcgagatctgcttggcgatgtgcttggcatcttatccagaatgatcttatccacggatggggcattgattacaaatttgggtactgtgctcagggtgacagaacaaagaacattggagtagttgatagtgaatacatagttcatcgaggggtacagacattgggaggtccttcagtaaagcgatcccatggcaaaaacaatgatccacttcaccagaaaactgcagaagcgcaacaacagatgagagtgaaggcaggccttgatatgcggacaaaggtcaggagatattcacgatcggagcttcgggatttccagaagcgttgggagcgggccaccagggaagacagagcatgggtcgatccgtttgctcgcccacgaagaaaaaggaagagaactgatagacaatag</cdnaseq>

Protein Sequence

<aaseq>MRLRLHLLILCLIILFLVYNMASYQHKQTKLEAKSRPFDTITVS DKVSSKVSKRSANRVGFLPHGIVEPYSDMELKPLWLTRSAQSKDSSQKDRCLLAIPAG IDQKRSVDAIMKKFLPENFTVMLFHYDGNVDGWNDLPWSKSVIHIAASNQTKWWFAKR FLHPSVVSMYEYIFLWDEDLEVDNFHPRRYLNIVKSEGLEISQPGLDPKLSEIHHRIT VRKKGWSFHRKVNRGNKDCAKEGPPCSGWVEGMAPVFSRSAWRCAWHLIQNDLIHGWG IDYKFGYCAQGDRTKNIGVVDSEYIVHRGVQTLGGPSVKRSHGKNNDPLHQKTAEAQQ QMRVKAGLDMRTKVRRYSRSELRDFQKRWERATREDRAWVDPFARPRRKRKRTDRQ</aaseq>

Gene Sequence

<dnaseqindica>5661..5792#5345..5374#5185..5250#4665..4751#3851..3904#3010..3076#2750..2803#2557..2673#2135..2236#1870..1988#1723..1806#1418..1552#1267..1302#1102..1191#gctccattccgcccgcgcccccgtgctcgtgccagtgtggtgtgcggtgtgccacccgcccccctttcccaatccctccggtctcccctggaaaaacattttttctcttcccaaccactaacacagcaccggcggccattaacgcgctccgccgcctccgccgatcctcggctccggctcctcctgcagacgcgtccgccgcagcggccacggcggtaagttcctcagttgtccccttctccgcacgaatcctagatcgttctgctgcgtggggttcggaggtatctgctatccgatcgcgtgctcgtgagatttgcctccgcttttgattgggagtaatcccagcgagcccccggcgacggcggcgagcgctcgcgaagctgcgagtggaggatcgaactgtcgaacgtcatttcgtcatcaagcatagcacgcttttttttcccctagtctagtcgccgatgcattatcattcccacccatgcttcatcgcgcatcttgtgcttgtgccatcctcaggctccagtaaagagcaactgcaaatcgtatcgcatcgcgaatcacgcatgacgcgtacattagatttttcagttttcccgtttatgtccgcttcctcgaatttccacccccccccccccccttttttttaccagcaatccacgggaaagcagatgctaaagctggagtatactacttttcttgttttcttccctccttttggttcgtgaggtatgcatccaaatttatgtacgcctcatgcctatgcatttctctgtgagggaccactagggatcatgcgggtcatgtttttaccccaaaagagaaaatctgacttttttttctctgcatacaggatgctatgaatttatcagacctttcttcttgatgtcatgagacagtccgcctttattccacatatttagaattttagatagtagtgccttgtggataaggtgagttcgcttgtgctgttttatttgttcatttctggtgaagtatatgcttgccgaactctctaagctggctcaatgcaaagtaatgaatgatgatactacccacttgattccacagaatggtagcgggagagatagctgttctaagatgagactgcggttgcatctgctgattctttgcttgatcattttatttctggtttataacatggcgagttaccaacataaacagacaaaggtaacactcatctacgaaatgtctccctgtagtttgcttgacagatatgactgaccttattatgggttgttgcagttggaagcaaaatcccgtccatttgatacaattacggtatgtaaaccaatcagctccactagaaggaaaagaactttgtgctatgttaatctggaagcatattttcatttgttgctgggacgctgattttgtcttctatgtaaatatttaggtgtctgacaaagtgtcttctaaggtgtctaaaagatctgccaatagggttggttttttaccccatggtatagtggaaccttactctgacatggagttgaagccattatggctcacaagaagtgcgcaatcaaaggtaatttgaaaaccaagcctattcttgtatacagtgtgttgctcagtacaatatatttgttggttctatttcagttttcatacataaagcaggctttagttgctccacctttctgagtacgaggcctgaatatctagttatctgacgctctgcgaattttggctccacaggattctagccagaaggatcggtgcttgcttgccatccctgctggtatagatcagaaaagaagtgtggatgctattatgaagaaggtacttaatttgctacctcaggaagtgatagtttcctcatgatggtaactcttgaatgttcagtttcttccagagaattttacagttatgttgttccactacgatggtaatgttgatgggtggaacgatctaccttggagcaaaagtgtgatacatatagctgcttctaaccagacaaaatggtatggcatctttctgcccttcctctgtgagaagagcctgactttgagtgctcttgctgttgaatatactttgcttcaccttgcgatttctactgatctggtgtcgtcttaattcaagataagataatgaggcatctattttttaggtggtttgcaaaaagattcctccatccttctgttgtctccatgtacgagtatatatttctttgggatgaagatctggaagtagataactttcacccaaggaggtatggtatttcataaatacttgatgttgattttgagcctcacattgcctagctgttgtataaatgatgttgaggttagacatactgaagtgctgaatcattcctagtacaatgtactgaatcccgtaatcctggttcaagaaactttgtataaaattatcagtgcatcttttaaatgtaagaatcaactactgactgactggtatgtgttaggctgcaaaagttaatcttggcaataatgtgatcttatgctaattttcttctcgagtattttagtttatgctatgcaacaattgtgctaacgcatgaatttcatgcaggtacttgaatatagttaaatcagaagggctagagatatctcaaccaggtcttgatcctaaattgtctgaaattcatcatcggataactgttcgtaaaaaggggtggagtttccacaggtaactttttcatgtgctgcaactttttttattattgatttgttgactaaatcaaacaacatatgcactttgatagaaaagttaatcggggaaacaaagattgtgcaaaagagggaccgccttgttctgggtatgtcttctttcttgagttatttctcattatatgacagctacttcgctgggtaactgtttgcattggttactgtttggtctagtgcagttcaatagtattgtcttactgcacagtaaacacagtaactacatttctgttacctagcatttagcaacaaacctagatcatatttctgcttggtgtaacgattatatcatctatagatgggttgagggcatggcaccagttttctcgagatctgcttggcgatgtgcttggcatcttatccaggtaatggttgtatctttcaatagcaatgagattctgaccatgtctcatatttgaatgtataattgaacctggctataaaactgtccttctgagtgcttaattcggccaggggtattacaagatggaatagacctcagagacccattcaatgttaaaattttgagccagtgacccatcctatgaacatcaagccatattgggcaaagtgatcaggactgttttttagtatacaaaaaggaccgttcagggcctgaatggcatccttttatccccttttggcagaatagttctgctcaaacatgtaaatatcaaatcttggatgataggggaaggagggagggagggaggaaaaagttgccaaaaaaaaaactgcggaaagagctgttataggcttatagcaacttgttttattggatccgtttattctaaaaaaagttaagtctccgtttttccacattactcacaaaatgctttgaatcatatttatttatgtggttctagttctcttagctttacatagtccccggattgctaatgctgcagttgtgaggaaaagggaccaatccattataagttcatagtttattgtagataaaatgacttgttgccataaggaattaatatatgatcaacctggtttttttttttggcaaaaaacacccccgtcaatttacctggttaccacaatctgaaacttacattttgtctttaacctaaatgacttttgtggactatattgcagccactaatatatatatgtttcattttttgcagaatgatcttatccacggatggggcattgattacaaatttgggtactgtgctcaggtttgatgttgcttttaaatagatgtggaattctttatagttaaactaggtgaaaccccgtgtgttactgcacgagtttagtatgataataagtagaaataatgtgtaagatagctagaccacataagcttatataagttaatgtgatttatgataatttaaatggtaatgatgatccaaatgtaaaagtaaggtgatatggctttatgagaggaaaaaggagggatataatttggaccatagaataatcatataagagctagaaacaattaaggtgatatggcttatgagcgaagagagaaataacattagctaagtgagggtgaggatgaactgtgtagatatataggatattgtaaaaaatgatggagatatatattgaaatattatgtgaattatgtgggatgatgatttaaatgtttgcattttagagctctagaatttaacaaattatatagataatataacatgcttgcatgaggtttaagatgtaataattgttagtggatgataatgtggcatctttgcatgttgagctttaggatgtaactttataaaaaggtaggatttctttggctacacgtgggcattggcaatgcagggttgtagttcatgtctcgaaatttcttttgtgaagttttattagaggaatagtcatatattttccttaattcttcatttccttaagtgatgtttcactgtaataatacttttaccttaaccttaccaccaaccatacttcctttttcatcatttttagggtgacagaacaaagaacattggagtagttgatagtgaatacatagttcatcgaggggtacagacattgggaggtccttcagtaaaggtttgtacagatctattatttttgtactgcacgacaatctctatcagaccatatattaatgcctttgggcacatataagaagataacacatcaactttttcgatgcactcattcactttcttgagttttaattgactgatattcctatccatatagctatagcttttatttttaaaaaaagaatttggggagttgaagtccttgttattgatattttactagctaagtcatagtgacatgaatacacagccacacaggactaataactgaaatgctgcatgtgatgattgactaatagttaccattgggtggaaagtgtactaagtgtgacaatagaaacatacttgtatataatttagggatgatgccattcttaattcttatatacactacattgcaccttaataactgtttcatatattaatttaatcagcgatcccatggcaaaaacaatgatccacttcaccagaaaactgcagaagcgcaacaacagatgagagtatgctgtctttgccagatccttagaatacacattgtagttatatttctttatgcaacctctcaataatgcatatgacgttacttgtaaacaggtgaaggcaggccttgatatgcggacaaaggtaagctaagaaactataatctggggaatgcttccatatggcatttatttgaaatatgacccaagctaaaacagtagaaccaagagttggaaccgaaacaagctaaataatcactgatatttcacttgtaaactgaaaatttctctgggttaaaactacaagtcaaacattatttggcagtttaccataatttgattttttttttcaagaatacacaagttttacccatcaatgcagcattctattctcttgcattaagatgaccatggtttgtttggtcttgtaggtcaggagatattcacgatcggagcttcgggatttccagaagcgttgggagcgggccaccagggaagacagagcatgggtcgatccgtttgctcgcccacgaagaaaaaggaagagaactgatagacaataggttagcgagtgtttcgatcatgatttgtatttttttttcttttgcaacaccagttttggagcgtagagttttcggtcgccacattatgtgtagaaaatttatgaattctttacaggtggtatctacagtttttttaaggtaacacatgacgaaactcccgaaaagtttgagcaggaaaagtttggttgtatgg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0564800, RefSeq:Os07g0564800