Os07g0565300

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Revision as of 08:42, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0565300| Description = Bromodomain containing protein| Version = NM_001066545.1 GI:115472822 GeneID:4343623| Length = 4042 bp| Definition ...")
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Gene Name

Os07g0565300

Description

Bromodomain containing protein

Version

NM_001066545.1 GI:115472822 GeneID:4343623

Length

4042 bp

Definition

Oryza sativa Japonica Group Os07g0565300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:23326266..23330307

Sequence Coding Region

23326510..23327058,23327353..23327926,23328126..23328203,23329192..23329241,23329952..23330185

Expression

GEO Profiles:Os07g0565300

Genome Context

<gbrowseImage1> name=NC_008400:23326266..23330307 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:23326266..23330307 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggtggtggtggtgggaggcggaggaggaggaggaggaggaggaggggtgaagaaggaggagggggaggaggaggcgaggggaagaggaggaggaggcggcgtggtgggagggtgggggacgtgggaggagctggtgctgggcagcgccgtcatccgccatgggggcgttgcgtggggcgccgtcgccgccgaggtccggtcccgctcgccgtgcgccttctcgcctgaggaatgtgaagctaaattttcagagatacaagcacgctactctgcatgcgatgcttggtttgaggagctccgtaagcggagagttgctgaattaagaaatgatctgaagaagtctgaaaattttattggatccctgcagtccatgatcaaaagcctcagcaatagcaagcatgatgatggcaactctgaatgtcacactagtcatactgagtcatgttcaaataatgaaaatacagctgataacaattcatcaagcaaagcattgtccaaagatagatcatctgctgctagttttacagaggaagcaagcaacagtcagaaatctgaaaaggtgcaacactgcgatactgattcaattcaagtgaacaatacttcagcagaggctttggtaaaaccccttgttgaaaaaaaggtttgtgctgaagatggtttgctttggggctctagaaagaaaagggccgtgagggataggaggacttttctgatggctgataatagttgcagagctggcgagaatacatctacatcacacatacagacagatggttcctctgaaggctatgcaaagaagggcttgaaaactccaaatctagaatctggtgtgtctgtcgttgagaaagcaaaaccaaacttggcagagattttgaaaactatatctactcaaagtgactgttatatgttgcaacgccgacttgatgtccagcggaagcggactagatacaagaagatgattcgccggcatatagacttccgtatccttcattcaaagatcaagagtggcgcaacatcttctaccaaggagcttctaagagacattctactgtttgtgaataatgtccttgccttctatccaaaggctacgttagagcacatggctgcaattgaacttcgaaatattgcattcagaacagtgcaagagagcgcaagcatgccctctaagagttgtggagtaacaggagcagcaactgcccctttagtgaagaagaacacccgacccgtgcagcctggaagtcatgggcctcatgatgcaaagagaagcaaagtttctttaaaggggactggaagtactgtcaagcagggtgaggccaagggatcgcgtggtggttcatcagtgacagctaatgtaaaaactatgcagagaaatccaccggccaagaagagaggcgttgggcggcctccaaagaatgggcagaagcgtgctgctgcacagcaagatagccctaacaaaggcaggaagaggacccgacgctga</cdnaseq>

Protein Sequence

<aaseq>MVVVVVGGGGGGGGGGGVKKEEGEEEARGRGGGGGVVGGWGTWE ELVLGSAVIRHGGVAWGAVAAEVRSRSPCAFSPEECEAKFSEIQARYSACDAWFEELR KRRVAELRNDLKKSENFIGSLQSMIKSLSNSKHDDGNSECHTSHTESCSNNENTADNN SSSKALSKDRSSAASFTEEASNSQKSEKVQHCDTDSIQVNNTSAEALVKPLVEKKVCA EDGLLWGSRKKRAVRDRRTFLMADNSCRAGENTSTSHIQTDGSSEGYAKKGLKTPNLE SGVSVVEKAKPNLAEILKTISTQSDCYMLQRRLDVQRKRTRYKKMIRRHIDFRILHSK IKSGATSSTKELLRDILLFVNNVLAFYPKATLEHMAAIELRNIAFRTVQESASMPSKS CGVTGAATAPLVKKNTRPVQPGSHGPHDAKRSKVSLKGTGSTVKQGEAKGSRGGSSVT ANVKTMQRNPPAKKRGVGRPPKNGQKRAAAQQDSPNKGRKRTRR</aaseq>

Gene Sequence

<dnaseqindica>3250..3798#2382..2955#2105..2182#1067..1116#123..356#gcgacgacgacctcctcccacacgcctatcgtcatcctcgcgatcgccgcattcatccatccactccccccgcacgccgaaggaataacctagaccagagacgaccaaggagagcgtctccgatggtggtggtggtggtgggaggcggaggaggaggaggaggaggaggaggggtgaagaaggaggagggggaggaggaggcgaggggaagaggaggaggaggcggcgtggtgggagggtgggggacgtgggaggagctggtgctgggcagcgccgtcatccgccatgggggcgttgcgtggggcgccgtcgccgccgaggtccggtcccgctcgccgtgcgccttctcgcctgaggtccgtgcttcccccctccccgtctccaaccctaacctggtggtagtgctcatgagtcgtgcccaatggctgtattgtcggtagttgtaggatactatgcattagggcatggatttagccatttaggggtgcttaatttaagtattatcatcgttggatgatttggtacatttccatcaaatggtcttaggttgtgattttagcgatgctgagaatatgtggtcgtgttgcttggacgggaatgagctttacattccaaacaaaatgaagcaaatgttaaggaacacatgctgtaattttgactcgcaacgagggaatggaatgaaaatgtaaccttacagccattggccttacagtaaagcacccattgcataccttgttcttgcttcgataccaaagtttgacagtttgtgcaatgccaagggtgattcgtcttacacttgcgtcaaactaatttgatggaatgctgttgttagctcatgcctttcttacaatagtttgggtatgtgagagcattgagcccattgtctgaaacattttggagcttagtacaatcagttttacagatcaaattgtttctagtttccaaaaaggagcaatgcattttatccgcctgcatgtctgatgcctgctggaagttatggtagacatttgcttacttgatattagagttccatactaattatgagcttacccattcttgttcgcaggaatgtgaagctaaattttcagagatacaagcacgctactctgcatgcgagtaagtgttgcatcattctttctatgttgtactagcttgtccacatgaattcagtcttataacgtcttgcagtaagtatgtgacgataaattagtaaattgctaaccttgaactttaacctgtgttgagtctcctgtcttggcctattgtatttttcatgcgggaactggatgaactctgaaactgattacacaagatgcataatttgtgtctcatggcacataaaagctaaatagacacgatttataccttatattatttgccttctttaagttggcctatgatttctaggatctacaattagaattacagcaggtgatttttttcctactctctgatatagttttccaattaggacaagtttggtggtaaaatggtgttttgctgtctagcagtgaactggcttagattttagaaattgttgtatgagggcaagggcactggtggatctggggtagagccgtagaggtagggataatactttatgatcaattgatcattgttgagttagctttgggatcatcagcatgagattcaaagaaagaaacagcaagtctctcaagttgggcacagttcgaacagtgcgtattttacaaaaagaaaaaatcttgctatagagaagtattttttaaaaaacaaaataaatccatttttcaagattttaataattaatagtcaatcaatcatgtgctaatgactcgccacgtttcaaatgccaccgataagctcagcctaactcctgatttgaacgtagcctaaagcagtagttgaaatttgaacagtcgattcaactcttaaacatcttttaataagatgtgctgagtttaagttactctcctcatattcagcttttacctagagccaatatacccaagacatttcaactggctgtggtctagtatgcatagtgttttgttctgcagtaaaacaactcacctgttggccattgatagaacatatcatattcattcaacttgcttctttgcagtgcttggtttgaggagctccgtaagcggagagttgctgaattaagaaatgatctgaagaagtctgaaaattttattgggttagtgtttatgttgttacatttcagtatatgtctaattcttgatcttctttttagcatttcaaatttaatttcacaataatttagtttgaatataaggcctatgattattgatttcagaaaaatggtcattccatctggttttcatcttttgtacacttacataatgtgaaatctggtttcctttttcctgttccagatccctgcagtccatgatcaaaagcctcagcaatagcaagcatgatgatggcaactctgaatgtcacactagtcatactgagtcatgttcaaataatgaaaatacagctgataacaattcatcaagcaaagcattgtccaaagatagatcatctgctgctagttttacagaggaagcaagcaacagtcagaaatctgaaaaggtgcaacactgcgatactgattcaattcaagtgaacaatacttcagcagaggctttggtaaaaccccttgttgaaaaaaaggtttgtgctgaagatggtttgctttggggctctagaaagaaaagggccgtgagggataggaggacttttctgatggctgataatagttgcagagctggcgagaatacatctacatcacacatacagacagatggttcctctgaaggctatgcaaagaagggcttgaaaactccaaatctagaatctggtgtgtctgtcgttgagaaagcaaaaccaaacttggcagagattttgaaaactatatctactcaaagtgactgttatatgttgcaacgccgacttgatgtccaggtatgatggatagatcttgtaaattcagtcaagtcttgtacttatggaaaattgattagagttgcacgctgtttgttctgatagggtatcaagcaaatgaaacctttgtggatactaagagtttttagaacccattttagcgacttcaaaataaagtatacatgtttatataactgtttgtgctggaagaaactttcagtgcctttctgcagtttatgcatttcaagatgaaaaaatagcagacactggtatgtttacattctatcttatttgtcacttttgtcacacctgcagcggaagcggactagatacaagaagatgattcgccggcatatagacttccgtatccttcattcaaagatcaagagtggcgcaacatcttctaccaaggagcttctaagagacattctactgtttgtgaataatgtccttgccttctatccaaaggctacgttagagcacatggctgcaattgaacttcgaaatattgcattcagaacagtgcaagagagcgcaagcatgccctctaagagttgtggagtaacaggagcagcaactgcccctttagtgaagaagaacacccgacccgtgcagcctggaagtcatgggcctcatgatgcaaagagaagcaaagtttctttaaaggggactggaagtactgtcaagcagggtgaggccaagggatcgcgtggtggttcatcagtgacagctaatgtaaaaactatgcagagaaatccaccggccaagaagagaggcgttgggcggcctccaaagaatgggcagaagcgtgctgctgcacagcaagatagccctaacaaaggcaggaagaggacccgacgctgaacttcggctcaaaatgcccaaatatacaaaactgtgtacagacagcgtatagctagaccacatagtgtcgtctctttcagtgtttacttgttacctggcaaagactaggtcggaaatcagaatgttgtagcagggagtagtactgtatttcctgttgttgtcttaaaaggacagataggaaagaacatttttataggcagaaactatcaacttagatatatatagtatatctcttgctttgtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0565300, RefSeq:Os07g0565300