Os07g0567300

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Revision as of 08:42, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0567300| Description = Alpha 1,4-glycosyltransferase conserved region family protein| Version = NM_001066555.2 GI:297607467 GeneID:4343633| ...")
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Gene Name

Os07g0567300

Description

Alpha 1,4-glycosyltransferase conserved region family protein

Version

NM_001066555.2 GI:297607467 GeneID:4343633

Length

5596 bp

Definition

Oryza sativa Japonica Group Os07g0567300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:23452908..23458503

Sequence Coding Region

23452908..23452974,23453638..23453832,23454430..23454519,23454637..23454774,23455696..23455845
,23457326..23458503

Expression

GEO Profiles:Os07g0567300

Genome Context

<gbrowseImage1> name=NC_008400:23452908..23458503 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:23452908..23458503 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgccgcgctcccactcgcacccggccgcgcggcggcgctccggcctgggcgcgcagctctgcgccgtggtggcggcgctcctcctgctcgtctccctcgccgtcctccactcccgcctctcctcctcctcctcctccccgttccccctctcctcctccggcgacggggtctccaactcctcgctcgtggaggacgaggacgacggcgccgcggtgctcgaccccacggttacgattacggcgaccaccaccaccaccaccaccaccaccaacgccgccgctgattccaccaccgatgcctcctccgtctccaaccctgaggacgatcccatcgacgagctcgacgtgctcgacgaggacaccgcgtccggcctaggcgcggccgacgaggtccccgcctccgcgtccgcgtcgtccctcgtctgggaccacgccgttggcgtcgcccgcctgcccttccgcctccccgccgccggcgaccccctcccggcggggttacctcacctcgagcccgcgcaccggatcgccgccgccgccttcggatccgacgacgagccggtggatctggagctccgggtggagatctcgtccatcgccggcgtcgaggacgcgttgctcctgaagcctgcctccagcgcccccgagactcccctccgtgctgggtgggcgcggtggctggaggggaaggctgactacctccggcgcgatcggatgctgcggtccaacctagaatttctcaatccccgcaaccacccgctgcttcaggacccggacagccccggccttacctctctcacccgtggcgaccgcatggtgcaccggatgcttctcgccgagatagagaaggctgcttccaaaaattttgagcggcggagtctgcaatcgtctgatattaagcagggaatgggagtaaccgagaaggtgcagcagaggaggtggggatattacccgggaattgatccacatttgggcttcaatgagttcatggagaagttttttgagcatgggaagtgctccgtgaaggtgttcatggtgtggaacagcccacagtgggcgtatggcgtacggcaccagcgtgggctggagagcctactgcggcaacaccctgaagcttgtgtcgtcatgctgtcggagacactggagctggagttcttccaggaatttgtgaaggaaggatacaaagttgcagttgcgttgccgaatcttgatgaacttttggagggcactctaacccatgattttgtatcagtgtggaatgaatggcggaaaacaaaatactaccccttgcattacagtgagctagtacgccttgctgctctttacaaatacggtgggatataccttgactctgatgttgttgttcttaaacctttaaacgcactccggaattctattggtgttgtcaaacaagtttctgaaaattccagttttagtggtgctgtattagcatttgaaaaaaacagccagttacccttcaagggctggcttagtaagccaattgatcaagagcaatgtcggaaacgttgttcaaatgtcatcaaattaaatgagagccctttcttagcggagtgcctgaaggaatttcattcaacatatgatgatgaactcttgcagtggaatggtgctgaacttatgacaagagtaatcagaaatatgtccgacaaagcagatgacaacagtgggcatcttgacataaagtttgaaccttctgttgcattttatcccataagctcaacagatattacaaggtcaacacaggcagccttgaagcttgtgttggtgggtcaagctctcccttcccacatcaagccgtag</cdnaseq>

Protein Sequence

<aaseq>MLPRSHSHPAARRRSGLGAQLCAVVAALLLLVSLAVLHSRLSSS SSSPFPLSSSGDGVSNSSLVEDEDDGAAVLDPTVTITATTTTTTTTTNAAADSTTDAS SVSNPEDDPIDELDVLDEDTASGLGAADEVPASASASSLVWDHAVGVARLPFRLPAAG DPLPAGLPHLEPAHRIAAAAFGSDDEPVDLELRVEISSIAGVEDALLLKPASSAPETP LRAGWARWLEGKADYLRRDRMLRSNLEFLNPRNHPLLQDPDSPGLTSLTRGDRMVHRM LLAEIEKAASKNFERRSLQSSDIKQGMGVTEKVQQRRWGYYPGIDPHLGFNEFMEKFF EHGKCSVKVFMVWNSPQWAYGVRHQRGLESLLRQHPEACVVMLSETLELEFFQEFVKE GYKVAVALPNLDELLEGTLTHDFVSVWNEWRKTKYYPLHYSELVRLAALYKYGGIYLD SDVVVLKPLNALRNSIGVVKQVSENSSFSGAVLAFEKNSQLPFKGWLSKPIDQEQCRK RCSNVIKLNESPFLAECLKEFHSTYDDELLQWNGAELMTRVIRNMSDKADDNSGHLDI KFEPSVAFYPISSTDITRSTQAALKLVLVGQALPSHIKP</aaseq>

Gene Sequence

<dnaseqindica>5530..5596#4672..4866#3985..4074#3730..3867#2659..2808#1..1178#atgctgccgcgctcccactcgcacccggccgcgcggcggcgctccggcctgggcgcgcagctctgcgccgtggtggcggcgctcctcctgctcgtctccctcgccgtcctccactcccgcctctcctcctcctcctcctccccgttccccctctcctcctccggcgacggggtctccaactcctcgctcgtggaggacgaggacgacggcgccgcggtgctcgaccccacggttacgattacggcgaccaccaccaccaccaccaccaccaccaacgccgccgctgattccaccaccgatgcctcctccgtctccaaccctgaggacgatcccatcgacgagctcgacgtgctcgacgaggacaccgcgtccggcctaggcgcggccgacgaggtccccgcctccgcgtccgcgtcgtccctcgtctgggaccacgccgttggcgtcgcccgcctgcccttccgcctccccgccgccggcgaccccctcccggcggggttacctcacctcgagcccgcgcaccggatcgccgccgccgccttcggatccgacgacgagccggtggatctggagctccgggtggagatctcgtccatcgccggcgtcgaggacgcgttgctcctgaagcctgcctccagcgcccccgagactcccctccgtgctgggtgggcgcggtggctggaggggaaggctgactacctccggcgcgatcggatgctgcggtccaacctagaatttctcaatccccgcaaccacccgctgcttcaggacccggacagccccggccttacctctctcacccgtggcgaccgcatggtgcaccggatgcttctcgccgagatagagaaggctgcttccaaaaattttgagcggcggagtctgcaatcgtctgatattaagcagggaatgggagtaaccgagaaggtgcagcagaggaggtggggatattacccgggaattgatccacatttgggcttcaatgagttcatggagaagttttttgagcatgggaagtgctccgtgaaggtgttcatggtgtggaacagcccacagtgggcgtatggcgtacggcaccagcgtgggctggagagcctactgcggcaacaccctgaagcttgtgtcgtcatgctgtcggagacactggagctggagttcttccaggaatttgtgaaggaagggtatgttcctgtagttctcattctgtgactcttgttaagggtagcatttgattaatcataggtgctaattttactatctaacactaattaacaaagaaatgagtttatgcttctgacccaaaacctgaaatgatttgattggtatcatatagaatccaggattactatttagtgtttgatgtatcacatactactaatattggactcattagtaatgaaactagcaaaaatgtttctggagtcttgtcttattgacacatggagtgaaatctgatcaagtagaggggcctggtatatattccagtttgacttaatttaacaatttttaaatcttacaaaatacaaatgatgctcatagaagtagaacctaggtaattcctagccatttcagtgtttgaaattctgctacagacagctaaggtgttgtcgacatgttaatatgttattttgaatcagcttatagttttcactaccagaactctctctctctcaatggccagtgtccgttggtggctatattgtactgttatttgagctctctctctctggaactcattgtattgttagtggcacttaaaactcaattctatagttttttctgttttgtgatggatttggttcattttctgccactttgcttggaaagtctatagttctgataaccaaactgtgctcctctatatcttttcttttcagctagaaggatccaagtccttcccatttccagtaaagaaatggcagatagtagctctttacaactgaaaggaaagcaacataaaaagagcagctaagctatcacctaaaagatgccatcccatctgttgtagtgacctagcagagagttcagaatgtaaagacacaacgccagctactttagagcttacagacagattactggctgaaaaccaacgaaagaaacaggatgattattgtgtcaaaacacacactcctctttatatgtgcatccatgcatgctttgagccagagtaacccatttaaccccttccccaaatagccacccatgacctacctcaccccattgttttttctcctccattaccttctgtcctgtgtcattaggtcataaacagttcagtaactaacagtctgacatattgaatgctcaacagctacacacaccatgattactaccttgctcctgctgtgctcaagttttttttataaccctgttacttttgtaatttgaagatacatttattttaacatttccttttgttatttgtggagtgggaaagcaacttatctatatattaccgttgctactaactgctaggtactggagtcaaatcatctgttgtcagttgatttcttatattaaataataaaattaagatatttctccacagtaactattcatttaatgttatatttgaacttcacatttacattccagaagcagcttctatttattttgtgtgataactaatgccacttgcatgtgactggtttcctcttacagatacaaagttgcagttgcgttgccgaatcttgatgaacttttggagggcactctaacccatgattttgtatcagtgtggaatgaatggcggaaaacaaaatactaccccttgcattacagtgagctagtacgccttgctgctctttacaagtaagacaagaaaggaccagacttgtttagttacatgcaagcttaacttcactctttacaatctgttagaagaatatagggagatgtcaatataccttcttgaaaataaaatctaatgtagtaatatatccatgtagacgaatccacaagtaatttactcttggtgaaagaataatatctcttacaaaggaactgaccgacaataccactgaaagaagatgagcagctttctgctgaatttaatacactgatttgtaatatatatataaattcatatgcctctaaaagtgtaactagcatgagcgaacatcaaaatgcaaatacagtcaccaacagattaatatattcaattgcttacaaacagccaaagccaaatttacattcatactgaattgaaatacttccttcacaaataaacattcagctaaacagagcataaacatcttattaagaggtgtaaaatgttctttcctttagtggaccactttagaatttctctggagctgacttgagctctgtgtatggattctcagttctgctgagctaaatcagtattttgtttgaatgctgccatgaaaacagttgagtagttgacataacatcaaaaggggggaatcttcacattcacgtatgaaaaaaagatgagtgctacaaactgtgcgaggtttaaatgccagtagcattcttcctgtaaacaaaggaaaaaaagttgaccagcaaatattatgagacttcatagaattttactttcgtcatactttattattactggaccaatagtttgaaagacagtatacttcaattttaattagttatattgctatttcgtctgaactaaacatagtcatgaatacatgtttagttccttttcttttttgaataggactattattgactgctgcctctgtgccctatctgcagatacggtgggatataccttgactctgatgttgttgttcttaaacctttaaacgcactccggaattctattggtgttgtcaaacaagtttctgaaaattccagttttagtggtgctgtattagcatttgaaaaaaacaggtaatagtattatatacttttctttcattgtaactgtttttttttgctttaattctggtcatcttggttaaaatgatatgtggtgcttttctgcattgcaaattggatgtgatttagccagttacccttcaagggctggcttagtaagccaattgatcaagagcaatgtcggaaacgttgttcaaatgtcatcaaattaaatgagaggtctgtgatgtattagccgggtgttactgttatggaagtaataagtcttttagtatgctttaataaattaatgcaatttagtcgaaagcacaagtcagtactactgtactgttatctactccctccgtcccaaaatatagcaaccttgtactggatgagacacttcctagtacaacgaatctggatatacccctgtccagattcgttgtactagaatgtgtcccatccagtacaaggttgctatattttggaatggagggagtaatacctaagccaacagacagataaagtccattactatcttttagtgttttatttaattttaggaaaaaaaagggaaaaaaacatgttgctgctattattttggtttgtttcttttgttacagttgtactatgaattagtatatggatcatgaacagtattctagaagtatcacaaaatataatgggtataaataactaggtctcaagtacacaaggtttatatctcatcttggtttctttttgttgattataactttgcaggcgtatatatatgcttatgcataactaatcatagcaatcatgtatttttcacctaacttatgttaattgcagccctttcttagcggagtgcctgaaggaatttcattcaacatatgatgatgaactcttgcagtggaatggtgctgaacttatgacaagagtaatcagaaatatgtccgacaaagcagatgacaacagtgggcatcttgacataaagtttgaaccttctgttgcattttatcccataagctcaacagatattacaaggtatgctgaatttgtttgcttcaatttaactatttgaaattgatattcagtattaaattttaagattgtttgttggtacatcaaagttccatctcaacttcccaagccgcaaggtgaactcttccgactgcaatgtttcattttaagataactaaaagaaaatcactatgaggcagacacagagaggggaggtcaaggctcacgagcttgtcattgttgcagtgatattcagtgcaagccccttgcactttgtcaccatgctatcacatgttaactagttttactgagagatgcacaaaccaaacctggacctgtttctaatcctcttgtcattgctattagctcttgcctgtaacatgctgtttttcccccttcaaccatttccaaactctatgaggtggccatcaaacacctctattacagccacctctcaccagattatagtgcctctcaattccagggaagttttgctttgacacttgttctggttgccagttagtgttacctagagctatgatcgttcacctgcattacaacagtccttgaactgagttgaatgtaaccattgatttgaactaaccaaaattaaactgtaatagtcatagaatgttcaaattgtcaattcaatttaatgaactgcaacttgatttcctgtgtacataggtcaacacaggcagccttgaagcttgtgttggtgggtcaagctctcccttcccacatcaagccgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0567300, RefSeq:Os07g0567300