Os07g0568400

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Revision as of 08:42, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0568400| Description = TB2/DP1 and HVA22 related protein family protein| Version = NM_001066564.2 GI:297607475 GeneID:4343642| Length = 472...")
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Gene Name

Os07g0568400

Description

TB2/DP1 and HVA22 related protein family protein

Version

NM_001066564.2 GI:297607475 GeneID:4343642

Length

4727 bp

Definition

Oryza sativa Japonica Group Os07g0568400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:23505219..23509945

Sequence Coding Region

23507645..23507745,23508262..23508359,23508845..23508903,23509718..23509750

Expression

GEO Profiles:Os07g0568400

Genome Context

<gbrowseImage1> name=NC_008400:23505219..23509945 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:23505219..23509945 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcttctggcccccgccatctccggcgaggtgggtttacggctcttactggcaccactaagctctactgttgtcatccgtacagccagttgtgcaattggggttggtctgcctgtgtactccactttcagagctattgaaaagaaggatcaaaaagaaaaagagcggtggctcttgtattgggcagcatatggatcttttagcattgcggaaatctttgctgatcagattctttcaaggtatgggaatttagtgctactcgtagcattctggagatgttattcctag</cdnaseq>

Protein Sequence

<aaseq>MALLAPAISGEVGLRLLLAPLSSTVVIRTASCAIGVGLPVYSTF RAIEKKDQKEKERWLLYWAAYGSFSIAEIFADQILSRYGNLVLLVAFWRCYS</aaseq>

Gene Sequence

<dnaseqindica>2201..2301#1587..1684#1043..1101#196..228#ggcgcctcctcctccaccaccaccaccaccaccatccccccaccaattggactcaggggagacctacccgcggagacgcgaactcgccgcggattccttgccctccacgccgcaaaccgcagccgcgcctccgcctccgcggcgggatcccttgctcctcctcctccacccccgcgcggcgtgcggaactcgccgatggcgcttctggcccccgccatctccggcgaggtacgatccctttggctggctcgtacggaaaccctagatcgcttgagacgttgctgtcggcggcgcgttcggtttgaggatcggggggacgatcggggtggattgggggagggcgcgcctcggattacgctttcttcttcattgtacgggaagagcacggtagattgtgggttagcatgggggtttcttcgttcggtggattttgtgttccggagccatgcgattttgctcccattgccttgggatggtattgggggtggagctgattgagttgtaatttctcgtgggttccgatttgtgctgaacgctttctagttcatccaccaaaccacccgttgacgtgaggattcatctcacgggaatttggcagacacgactcaaccttatcgtttttcagcgcgttcaaatttatttgggcttgcttttagggaaaaattaactttgagttaacttattttcgttttgcaatgagcatcactcttgatcaaatctatatatccagtctgccaacagaaacagatagataccctttttatcagtacattaacgttttcctgatagcccattttttatggccttttgtaattttttgcactttgcaacgcctctaaatatggcacttcaaatttctttcttttttatttggggcagttcggctaatcaatctgtttgtatgaggtagagattacatttatattacgcatattatctcataatgtgttttctgatggattcctggaagttccatgacccccatacttgtcttacagagatttattgaaactttgtattgaaattgcatttgttatgacaggtgggtttacggctcttactggcaccactaagctctactgttgtcatccgtacagccaggtattcattgcatttttactcttatctgcgttgcttgtccattatgttgattgattttttttctaataatacatcgaaagtttattctctttaggaccatcataagagtatgtcaattagttcattgtatagctattcacttctgtcattgttgtgttgtcaacggttacgtatattaggctattagcacattgcaatgacgtagatttttacctatggggaaagcgttaccgcaagtttatgctcacatctataaacatcattgatgtgagataagcagaatctaaactgcaatattcatattggctattaggcgacacagtggtgatttagagtcacctatccgtataatggctgcaactgcaataaacctaaaaactatattttttgtctgtcaatactttcctcaaaataatgaactactattactgttgtggaaaagaaattcgtccataatttattatgctcacttcatgcttttgcagttgtgcaattggggttggtctgcctgtgtactccactttcagagctattgaaaagaaggatcaaaaagaaaaagagcggtggctcttgtattgggcaggtctgtaataaaacaaaatcctatgaaattttcactattaactttgaagcaccttttcagtatattgataggtactctatgtgaccaattgctataatattactgctaaagtaaaagaaaaatgatgacggaggttgttgcatttttcgaaagttatttatatggtgtctgcatgctcagaaagttatttgaagtgtcaaagctaatactctgcacatttactagtcctatcaccttaacatggttactttgctgaggagtttagggatgcaagtgggccagcctactatcccatccaaaaggccatttaatattgtgggttagcggctggccacttgcatccttggaggacatacctgtatgatcttatggtttatagttacaaaggcagttggttaattatttgtgtaatcagctttcatctaaatgaacatctctaagaaatagaaaagatacagatgtatatcaaacttactgctttgacctttagatgctcttgttcaaaatgttttgcagcatatggatcttttagcattgcggaaatctttgctgatcagattctttcaaggtatgggaatttagtgctactcgtagcattctggagatgttattcctagcacacaatatactgctgcctacagctattgaactctagtagatcatttcttttttctgaccaaaaactatataaatcggccaagacaatgccgagtacttccgaaaccaaagaagtaatccttgctgttcatcaccattctcactacttggtggtcgtggtcaatcagcttgtccatgttcaagttaagaaaagcgaacatggtgcattaagacacaacatttaatctaccagggaattttcctgtataacctggcgagttgctgatctttattgatcagcttctaactgcctttctggttatgtttatataaaccatggaataaatcaaaacattccagtggagaggatgtgtgaaagaggaccctacgaatagttgacagtgcatggggacagtatatgtgcggaatgtagcattaactgaaagaaattgcattactaggaatatttggttgaaagtttcgccgggcatgggtttaaatttacattgcctttattaacttgatgtttctaatcttgtaaagtttgatgtccttgtaaacttttcgaacatttatactctggtgatattctgcagtgttcctttctattatcacgtgaagtttgctattcttgtctggctccagtttccttcaaacagtgtaagcccccctcccccccttcccctttctctctgatcttaaaatgtttcctcatattttcatatttctacataattgaccaaagagaaagcattactatgttcttgctatcaagaaataagacctgaactgaagaatattattatggtattcattatctgaaaaccacatgacaaacgttttatatgaacatgaacccaaaatggcaaaatcaaggggagaatatagtctctaacagggtcaggtcagatggttatttggtcagtggtatctagacatgacacgtgtgattgacaagttccatatatctggtaggacaatccatcccggagcattttgagtcttggctatatgatagctcaatcagtatgttcattgcatatgttccctgtgcatcgctttgcccaattttttttccatttcaagcacttgctgtgatcatctagatgaaaacctgtgattatagtttcttgatatcattgttcaattggcattgtcttctgtcaatcgcttaggaaacattttattcttttggtctagctaaacattatttctatgtttgtggctagatttgttctattgttcctctggatggttgtaaggttgttgactggtgtgacctatgtttggcacttgatacatctgcatcgatgaatggtgaactagaaaatttgattttctgtacatgctgataatggtgttattgtttacttagggagcaaagcatgtatatagaaggtatatgcggccgtttttcctgaaacatcaagcaaaaatcgatagaatcctaaatattctatcgaaggaactagtaagtatctgcttctagtatgcatttctttaggcattttttcgtgaatgtatttctgatgcaaatcatattgccactaatcaaaccagaacaagttcgtgagcagccatgaagatgagatccatttcatagagcacatggccgccaggggtgcttcaacaggtacagaatttgaaatcgattctctagactgacaaacctctgcttcaacaaaaaactaggaactgtggtaacaactgggagcagatgataaaatagcgagatgaattgggacctcaatttatttagcttagttttgagcatttctgtggacttgtcatcagcgtcacgatttcatagcttatctcttatgtcttgtgtttgtctcattcaaggtctcaatcatctgcactcagtcctttaccattttaaactatagacattaagttcatcaccttaatattgcaagctttagtagcccgtgcaacatcctatttgcttttgtcctgtgttatgtcagcactccatatacattagtatgatatgcatcttattttgcactaaaaccttcagcttcaatgcaaactaaactgtgctacttatgtttggaccagcaaattatataataaacggtcctgaacaatcagaagcggtcagagcagcgatcgaagggccaaattcaaccacaacggaagaggctggcacccccagaaatgaaacatgagcttgacttcatcagtttcttaagtgtgtttggcaagggcacagcaaatacatttgtgtcgatgtgctacagtaatgtttatttagattatctttccagcttatttatttaggggtttccagctttgtatttttcatgggatttccagcttgttagtggaatgtgaatatgagcatgacaggttctgtgtcgcttaagctagatcgacactatcaaaccacttattctgttggcatgagatgtggtaatttaacgtttcagattttgcatct</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0568400, RefSeq:Os07g0568400