Os09g0472200

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Revision as of 07:29, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0472200| Description = Similar to ABC transporter| Version = NM_001069982.1 GI:115479706 GeneID:4347345| Length = 6276 bp| Definition = Or...")
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Gene Name

Os09g0472200

Description

Similar to ABC transporter

Version

NM_001069982.1 GI:115479706 GeneID:4347345

Length

6276 bp

Definition

Oryza sativa Japonica Group Os09g0472200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:18698382..18704657

Sequence Coding Region

18698382..18698850,18699292..18699371,18699484..18699948,18703032..18703118,18703249..18703380
,18703464..18703655,18703771..18703857,18703983..18704657

Expression

GEO Profiles:Os09g0472200

Genome Context

<gbrowseImage1> name=NC_008402:18698382..18704657 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:18698382..18704657 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtccgagcagcagcccgccgccgtgccgaggtggacgccgagcccgcggcggcgtcaggacgacgacgaggctgatcgcaagggggcagccggcatggtctccgatctcggcgcctccatgcgcggcaccgaaggctttcccttcggcagcgggcgatcgttccagccgccgccgttcctgccggcggcggaggcggagcagccctcgccggagattagcgtggagaggaacgacgagaacgaccgtgtcgccttcgtcgtcgctcgagagacgtcgtccttgcgccggccggaacaaggcgccgtcctcgcgtgggaggacctctgggtgtccaccgccggcggcagccgccgccgcgttcccatcctctgtggcctcaatggctacgcgcgccccggcgaggtcctcgccattatgggcccctccggctgcggcaagtccactcttcttgactccttagcaggaaggttaggctccagcgtgagccagaagggagacatcctgatcaatggccggagacagaagctggcgttcggcacgtcggcgtacgtgacgcaggacgacgtgctgatgaacacgctgacggtgcgggaggcggtgcggtactcggcgcagctgcagctgccgagcgggatgagcgcggcggcgaagcgggagcgggcggaggagacgctgcgggagatggggctggagggcgcggcggacacgcggatcggcgggtgggcgcacaaggggatcagcggcgggcagcggcggcgggtgagcatctgcatggagatcctcacgcggccggcgctgctgttcctcgacgagcccaccagcggcctcgacagcgccgcgtcgtaccacgtcgtcagccgcatcgcccgcatggcgcgccgcgagggcatgaccgtcgtcgccgccgtgcaccagcccagcaccgaggtgttcggcctcttccatggcctctgcctcctcgcctacggcaagaccgtcttcttcggccccgccgccgacaccgcccagttctccgctctgagcggattcccttgtccgtctctgatgaacccttctgaccattttctgaggaccatcaacaaggacttcgacaaggacattgaggtaggtctggacgggaagacgatgaccactacccaagcaatcgacacacttgtcaactcatacaaatcctccgttcacttggcgaaagtgatgcatcagatcgaagaaatacgcgccaataatgaagggcaattggtgaagaaggaaaggcagccaactttcctgacgcagtcatgggtgctgacgaagaggtccttcgtcaacatgtacagggacttgggctactactggctgcgtttcgccatttacgtcgcgctctgcctctgcgtcggcaccatctactacgatgtcggccattcctatggatccatccaggcccgtggctccatgctcatgttcgtcgctgccttcctcaccttcatggccatcggtggcttcccctctttcgttgaggacatgaagatatttgggagggagaggctcaacggccattacggtgtggcgtcgttcgtgatcgcgaacacgctgtcgtctacaccgtacctagctctcatctccgtggtgccaggcgcgatcgcctactacctgaccggcctccagagcagcggcgaacacttcggctacttcgcggcggtgctcttcacgaccatgatggtggtggaggggctcatgatgatcgtggccagcgccgtgccggacttcctcatgggcatcatcaccggcgccggcgtccagggcgtcatgatgctcaacggcggcttcttccgcctccccaacgaccttccaaagccggtgtggaagtatcccatgtactacatcgcgttccacaagtacgccaaccagggattctacaagaacgagttcttaggcctcaccttccccaaatacaacgatcaagccggcgccggcaccgtgatcaccggtgaagagatccttacgaactactggcaggtacagctcgggtacagcaagtgggccgacctcgccatcctcattggaatggtggtgctgtacagggtgctcttctttgtcatcgtaaagctcatcgagaagatgaagcccatggtgcagaggctccggttcaggagcgacatgccgtcagttcaggtcactgagcagggtttcggcagctcatga</cdnaseq>

Protein Sequence

<aaseq>MASEQQPAAVPRWTPSPRRRQDDDEADRKGAAGMVSDLGASMRG TEGFPFGSGRSFQPPPFLPAAEAEQPSPEISVERNDENDRVAFVVARETSSLRRPEQG AVLAWEDLWVSTAGGSRRRVPILCGLNGYARPGEVLAIMGPSGCGKSTLLDSLAGRLG SSVSQKGDILINGRRQKLAFGTSAYVTQDDVLMNTLTVREAVRYSAQLQLPSGMSAAA KRERAEETLREMGLEGAADTRIGGWAHKGISGGQRRRVSICMEILTRPALLFLDEPTS GLDSAASYHVVSRIARMARREGMTVVAAVHQPSTEVFGLFHGLCLLAYGKTVFFGPAA DTAQFSALSGFPCPSLMNPSDHFLRTINKDFDKDIEVGLDGKTMTTTQAIDTLVNSYK SSVHLAKVMHQIEEIRANNEGQLVKKERQPTFLTQSWVLTKRSFVNMYRDLGYYWLRF AIYVALCLCVGTIYYDVGHSYGSIQARGSMLMFVAAFLTFMAIGGFPSFVEDMKIFGR ERLNGHYGVASFVIANTLSSTPYLALISVVPGAIAYYLTGLQSSGEHFGYFAAVLFTT MMVVEGLMMIVASAVPDFLMGIITGAGVQGVMMLNGGFFRLPNDLPKPVWKYPMYYIA FHKYANQGFYKNEFLGLTFPKYNDQAGAGTVITGEEILTNYWQVQLGYSKWADLAILI GMVVLYRVLFFVIVKLIEKMKPMVQRLRFRSDMPSVQVTEQGFGSS</aaseq>

Gene Sequence

<dnaseqindica>1..469#911..990#1103..1567#4651..4737#4868..4999#5083..5274#5390..5476#5602..6276#atggcgtccgagcagcagcccgccgccgtgccgaggtggacgccgagcccgcggcggcgtcaggacgacgacgaggctgatcgcaagggggcagccggcatggtctccgatctcggcgcctccatgcgcggcaccgaaggctttcccttcggcagcgggcgatcgttccagccgccgccgttcctgccggcggcggaggcggagcagccctcgccggagattagcgtggagaggaacgacgagaacgaccgtgtcgccttcgtcgtcgctcgagagacgtcgtccttgcgccggccggaacaaggcgccgtcctcgcgtgggaggacctctgggtgtccaccgccggcggcagccgccgccgcgttcccatcctctgtggcctcaatggctacgcgcgccccggcgaggtcctcgccattatgggcccctccggctgcggcaagtccactcttcttgactccttagcaggtaacatttgagaaagtggattttgatcctttatttgcatgtcacttaaatagttatgaaaaaaaattaaaaagatatattaacatgtgatatcttactccacaaacatgcaagtcaaatttaacttctacatctcgcaacgaaaaagcaaatttaactgtgaatatacgttagttgtagtttaatttattttttctttgcgagatgtagaatttgaatttgaacttctatgtttgtggcgtgatatatcacatgttaatacatcttatcaatttttttcatgactatttaagtgacatgtaaataacaagagaatatccctcgagggattaaaatagtttcccttacatatgatgcatgccactcttctgatcacctcggcttgcgtgtgttccgagacaccgaatatcaccgatcgaattgcatgaattctgggtacaggaaggttaggctccagcgtgagccagaagggagacatcctgatcaatggccggagacagaagctggcgttcggcacgtcggtgagtcgatcggcgacgaatgatctcgttttttctttgataaagattcgagcaatgatgcaagcatggtgagatctcgtgtcgtggaacgcatgaatggatcgcgccacaggcgtacgtgacgcaggacgacgtgctgatgaacacgctgacggtgcgggaggcggtgcggtactcggcgcagctgcagctgccgagcgggatgagcgcggcggcgaagcgggagcgggcggaggagacgctgcgggagatggggctggagggcgcggcggacacgcggatcggcgggtgggcgcacaaggggatcagcggcgggcagcggcggcgggtgagcatctgcatggagatcctcacgcggccggcgctgctgttcctcgacgagcccaccagcggcctcgacagcgccgcgtcgtaccacgtcgtcagccgcatcgcccgcatggcgcgccgcgagggcatgaccgtcgtcgccgccgtgcaccagcccagcaccgaggtgttcggcctcttccatggcctctgcctcctcgcctacggcaagaccgtcttcttcggccccgccgccgacaccgcccaggtacaaactattttgtcccaaatacaaattatgcatccgtatttgcaaagttgtacggcaaaatgagaattgttaccaaacatactgtatcagaattcagaattcggatatatagggaaaagttattttatgaggggatatatcctctcgttttgtgcgtgtcacctaaataattataaaaaaaaaaaaatcggtaacatagattaatataaaatatatcactctacaaatagtaaagtttaaattcaacttctacaagttgtaacaaaaataacaaatatagttgcgaatgtgcaataactattttcagtttaatttgttatttttgttgcaacttgtaaaagttaaatttagtcttgcatattcgtggagtgatatattacatattaatctatactgtcatttttttatttttttaataattatttagatgacatgcaaataacgaggagatgtctctcaagggatgaaaatccacatccgatatatagcttaaatgagatgagaccggttaagaaatccgaaagccctagccctataccgtttgcaactgtagatgacgctgacttagcttactcatgaacagaagcaacagaacacattcaatgcactgaaacacactcgcacagtgactccaatcagtcggtgacgtgcgaatttgcaccttcttgtgctttctgtagcttacccttctgacggattcattgatcccaacaggaagacgcagctgcagtagtagtcttccggctgcaagctgccgcgtgccagcatcatatctagtatacagtggtgcagatgcatcagttttggcaaaatttcagttctgaaagctgcaaatcaggttctatactactatgcaaagatcctacaatacagttagtaggtaagacacactgcacaaatcctgaattcctgatacaacaaaggtatcaggtattcaagtgtggtttgaagtcgaaattaggaagcactaggtcaccacgagatttctaaagctgcaaccgccgggaaccggtttgtgaattcagaaatttggatttaaattaacttttgtccagttatcggcaccggttattggtttttcaaattaaacctaaatacttgacctggcctagagtagggaagtagtacagtcattccaaaatatagaaacttctaactgatacatacacataaattttagtattttgggacgaagttggtaatatacataggcagaagttactatatgtagcaaaagaaaaccatgaagttaagtagaaaacaaacgtcttttctgatttacaatgggatttgtggcgaatggcttgatcggcgcttaagacaatagaaaaatgttgtgcgcatgatttggacttacaatcatggtacgatctaacgggatgacatggatgcatggcactgagtcgactgctgcataccagcatcagcgtcaataaacacataagctgtttcatcgtacaaatatcgtaaacggcaaatcatacgtgtagcatcactctaggctcagatctgcaaactgaacttactggttgctaattaagcaaggatcattatatctatgatatggagtagggatgaaaacgactcggaaacaaacagaaatcatctctaccacttcattttatattttttttgggcatcggaataggaatcagaaactctagatacgaaaaccgaatttattattattgaatatgaaaacagagcgaacacaaatcgaagctaatatggtaacagatatttatcggattataaaacctcctcaaattgaacttctcaaatcgacaaagtgatgtagctctttttttttcctagaacaacaaatcgacattatctattttttatcaattaataataatacagctagtggcacacttcacttttcatgaaaacaagaactatattcatctatactgtaactgtaagtagtatggctcaaaatttctgaaaatttcaggaattttcatactttttcgccaaaattatttgaaaaattaacaaaaattgattgaatattccaaaatcacaaaaaaatgggaaaaaacaaaaattctggctgacatatttacttgccagtgggggtggcgaaattactgaaattttaaactgaaattgacaacctttgtttggcatggcctagtaaaacaaaaatagtaattaggaaaaaagaaaaacagatctaaagtactgaactagaaaacaatatctccattcaactaattaaccatctcagtgtactcagtataaatctaaacatttagagtagaaaaggttagagcaaattagttgtatgtgagaagtacttcatttctgattctgaggaaaaaaatccgaatttgtttatgaaaagttctcgatcgatcctggtttctgacggatagtagccttatcgtatccattttcattttcaagaaaaaaaatccgaattcgtttccatttctgaaacttaccgaaaaaattccgacactttctgttttcgaaaatacatccggaaatcagaaactttctgaaccgttttcatccctaatttggagtaacctagaccgtgagatgtcacactagtttcgtgatggaaagcatatttctcctccctagcaaatctgtgatctgtcaaaatcaaaatagggttgaacaaaacagcatttgtggaacaaaatcaaaacagtgttgaacaagtatagcaaaattttctatgccgcttatttttgttgaacaaaacagcatccccgccactttaaacaaaagaaaaggaatacatatgcaatgtttttttttctgaatctgaaccactttaaacaaaaaattcaactagatttaaagaaatttgaatggatcagaaattttcatccaattcgaaaaaaaaatctcgggagggtccaagatatatattgtttttcttaaaaatgaaacagagatatatattgtgagattttgatctgaatgtgaagcacttaacaaacttgaattgagtattgactgtacatgctattttgtattgactaatatcatgagaatttattccggttgctagctaagcacttcctaattttttttattgactatatttcactgtttattagttctccgctctgagcggattcccttgtccgtctctgatgaacccttctgaccattttctgaggaccatcaacaaggacttcgacaaggtgagaagcaaatcatgggagagcaagctagccaatgcactgaatcagtgaataaatatcctttttctcaaaaagaaagtgactaaatgtcctaaataaattactcccttctatacgatgcattcatcaggacattgaggtaggtctggacgggaagacgatgaccactacccaagcaatcgacacacttgtcaactcatacaaatcctccgttcacttggcgaaagtgatgcatcagatcgaagaaatacgcgccaataatgtatctcgcaaagcattttctgctacatatatatataatatatgcatgctttacacatcctgtaattttctttatctctgcaggaagggcaattggtgaagaaggaaaggcagccaactttcctgacgcagtcatgggtgctgacgaagaggtccttcgtcaacatgtacagggacttgggctactactggctgcgtttcgccatttacgtcgcgctctgcctctgcgtcggcaccatctactacgatgtcggccattcctatggatccatccaggtttgctggccatgcatggctctggcacagtcttccatattaatttgttcgcggtttaatatctattactcattggcaaaattgtgtgtgcatgaccgtctgaaaatctctgcaggcccgtggctccatgctcatgttcgtcgctgccttcctcaccttcatggccatcggtggcttcccctctttcgttgaggacatgaaggtttgttcactgattttcttgaatgtcaaattaaggacacttttacaccaaccaagatatattttgaacagccaagatatacaccaaccaaatgttcactccataaattttgatatgatatgcagatatttgggagggagaggctcaacggccattacggtgtggcgtcgttcgtgatcgcgaacacgctgtcgtctacaccgtacctagctctcatctccgtggtgccaggcgcgatcgcctactacctgaccggcctccagagcagcggcgaacacttcggctacttcgcggcggtgctcttcacgaccatgatggtggtggaggggctcatgatgatcgtggccagcgccgtgccggacttcctcatgggcatcatcaccggcgccggcgtccagggcgtcatgatgctcaacggcggcttcttccgcctccccaacgaccttccaaagccggtgtggaagtatcccatgtactacatcgcgttccacaagtacgccaaccagggattctacaagaacgagttcttaggcctcaccttccccaaatacaacgatcaagccggcgccggcaccgtgatcaccggtgaagagatccttacgaactactggcaggtacagctcgggtacagcaagtgggccgacctcgccatcctcattggaatggtggtgctgtacagggtgctcttctttgtcatcgtaaagctcatcgagaagatgaagcccatggtgcagaggctccggttcaggagcgacatgccgtcagttcaggtcactgagcagggtttcggcagctcatga</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0472200, RefSeq:Os09g0472200