BGIOSGA015045

From RiceWiki
Revision as of 15:59, 22 July 2012 by 124.16.129.48 (talk)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA015045

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015045, complete gene.

LocusTag

H0525C06.6

Ensembl Transcript ID

BGIOSGA015045-TA

Ensembl Protein ID

BGIOSGA015045-PA

Length

3628

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:19862326..19865953

Sequence Coding Region

19865841..19865953,19865531..19865703,19864588..19864952,19864438..19864516,19864017..19864333
,19863533..19863943,19863226..19863384,19863059..19863147,19862326..19862476

Genome Context

<gbrowseImage1> name=IndicaChromosome04:19862326..19865953 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:19862326..19865953 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCTCTCTTAAAAAGGAGACCGTTCTTCTTACTGGATCCGCCAAAGGACTTGAATCCAGAGGACAAGGTGTTCCAAGTTCGGTATACCAAGGAGATATTCCGAGATTACCAGGAATACCTGAATAGGGTAAACCTTTATCGTGAAAGAGTTTGGACATGTAAGGTGTCTGGAAAATCAAATTTAACATATGAGGAAGCGCTGGTCTCAGAGCATCATGCTGCAGAGAAGGCTCAACAGTTGCCAAGAGAGTTAATAGCGCCTGTTCTACATATGATTCAATACAGCACTCTTAGCTTGACTGACCTTGTCAACAAAATATACAGTATTCTCCAAGAAGACTTTTTTGAAGGATTAGAACTAAATGGTAGAAAAGATGGTTCTGTGTCTGCTTGCAAGATCTTAAAGGTTATTATTGGCTCTGGTAACACCAAGATGTATGAGGTGGGTTGGATTGGTCAGGACAATGCAGAGACTAACACTTCAGTTCTTCAAGCCGATGATCTAGTAATTCGCAAGAAGGCACGTGCTAGTCGTAGCATGCTGAAAATATATATTAGGGAGTCAACATCACAGAATTCCCCATGGATTATACATGCAAATCTTGCAAAGAAATATGGAATACCCACTGAGCCCCCAAAAGACTTATTGAATGGTCAAGGGTTGCCAAAACTGAGGAGAGGACTCGAGAATGGAACCACAGATGATGTCAGAAAAAAATTGAAGAAAGGTGAGCCAATTGATGATCTTTTATTAAGGCCTACAGCAGATGATCCCAGTCTGTCAAAAAGACGTCCACTGTCTACAGATTTCAGAGTGCCTGTAGATTCTGTTGGGGATCTACTTATGGTTTGGGACTTCTGCATGACTTACAGGAGGATTTTATGCTTGTCTCCATTTTCCCTCTCGGACCTGGAGAATGCAATCTGCCACAAAGAAAGCAACCTTGTTCTTCTTGTGGAATTACATGCTGCACTCTTCCATTTGCTCATTAAAGATGGAGGCGGGTATTTTATGTTTCTCCAGAACAAGAGAAGGAAATTAAAGGTAACATTGGTCACCTGGGCTGAGTATCTATGTGATTTCTTGGAAATGACAAGTAAAGAAGAATTCTCCAGTAGTTTATCAACTGTAAGAAGGGGGCATTATGGACTTGTTCACACTGCCGTGAAGCTTAAAATTCTGCGGGAACTGGTAGATGAAGCCATAACAACTTCTGCTGTAAGACAGAATATAGATGAAAAGATTGACCAGCAACAAGCTATTGCAGCATCAAAAAGAGAGCTTGCTAGAAATAAAAAGGAAGAGCATAAGCTGGCCATGGAAGGGGTGACAGAAAAGGAAATGAGTCAGACAGATGCTGCAGAAAATGTCAACGGGAATGTAAATGGTCAGGTTGTGGAAAAAGAAGGAAAGGAGAAGAAAAACATTTATGCCAACAAGATGGGAGAGGGGAAAAGGCACCTTGGAACAGAAATGGAGAAACAATCTGTACAAAGCAATTCCCTTGGAAAAGACAGGTACTACAACAGATATTGGTTTTTTAGGCATGAAGGACGACTTTTTGTCGAAAGTGCAGATTCCAAAGAATGGGGTTACTACAGCACTAAGGAAGAGCTTGATGCGCTTATTGGATCGTTAAATGTTAAAGGCATAAGGGAGAGAGCACTGAAACGGCAGCTTGATAAGTTCTATAATACGATAAGCAATGCTCTGGAAAAAAGAACGAAGGACGTCACCCAGAAAATGCTACTCCAAGAGGCTGCACTGCGGCGATCCTCTCGTGTACAGGCCCAACCAAGGGATAACCCTTCGATGTTATTCCTCAAGTATGTCAACAAATGGAAGGAAAACTGA</cdnaseq>

Protein Sequence

<aaseq>MPLLKRRPFFLLDPPKDLNPEDKVFQVRYTKEIFRDYQEYLNRVNLYRERVWTCKVSGKSNLTYEEALVSEHHAAEKAQQLPRELIAPVLHMIQYSTLSLTDLVNKIYSILQEDFFEGLELNGRKDGSVSACKILKVIIGSGNTKMYEVGWIGQDNAETNTSVLQADDLVIRKKARASRSMLKIYIRESTSQNSPWIIHANLAKKYGIPTEPPKDLLNGQGLPKLRRGLENGTTDDVRKKLKKGEPIDDLLLRPTADDPSLSKRRPLSTDFRVPVDSVGDLLMVWDFCMTYRRILCLSPFSLSDLENAICHKESNLVLLVELHAALFHLLIKDGGGYFMFLQNKRRKLKVTLVTWAEYLCDFLEMTSKEEFSSSLSTVRRGHYGLVHTAVKLKILRELVDEAITTSAVRQNIDEKIDQQQAIAASKRELARNKKEEHKLAMEGVTEKEMSQTDAAENVNGNVNGQVVEKEGKEKKNIYANKMGEGKRHLGTEMEKQSVQSNSLGKDRYYNRYWFFRHEGRLFVESADSKEWGYYSTKEELDALIGSLNVKGIRERALKRQLDKFYNTISNALEKRTKDVTQKMLLQEAALRRSSRVQAQPRDNPSMLFLKYVNKWKEN</aaseq>

Gene Sequence

<dnaseqindica>1..113#251..423#1002..1366#1438..1516#1621..1937#2011..2421#2570..2728#2807..2895#3478..3628#ATGCCTCTCTTAAAAAGGAGACCGTTCTTCTTACTGGATCCGCCAAAGGACTTGAATCCAGAGGACAAGGTGTTCCAAGTTCGGTATACCAAGGAGATATTCCGAGATTACCAGTATCCTCTTTCATGCCTTAATGGCTGCTTATTGAGTTGTCCTTTATATGAAGAATAATTTCCATTCTAATCTGATATTATGTACTTGTATTAGATTATGTTGAAGTAATATGGTTATGTCCTTGACTATTGATTAGGGAATACCTGAATAGGGTAAACCTTTATCGTGAAAGAGTTTGGACATGTAAGGTGTCTGGAAAATCAAATTTAACATATGAGGAAGCGCTGGTCTCAGAGCATCATGCTGCAGAGAAGGCTCAACAGTTGCCAAGAGAGTTAATAGCGCCTGTTCTACATATGATTCAATACAGTATGACCACCAAGCTTTTCCTAAACCTGTTACAGTTCTTGGCAGCGTTATTATGATTGCACATTTCCAGAAAATGCAATGGTTTTTTATTTCTTTATGGTGCACACTGTTGGTCTGTGTCCAAATTGATTAGTATTCTGTCTATGCATTTTCTCATTTTTCCTGTGCTATATGAAGTTTGACTGAGCTAATACTGTTTGAAAGATATATTAGGTCCGTAGTTTTCCCCTTGGGGTGTAGTGTAACACGCAGAAGGCTTTCTGTGTGACAAATCTCTCTTTTTTATAATTTTGATGAGATGTCATCCTGTAATTGTGCGCCCATGTGGAGGTTGTTTGCCTAGTCCTCAACTTCACTATAGTTTGCAAAAGGGACAATCTGTGACTTATTGATCTACTGTATATTTAGTATCTGTACTATATTATTGGTGTTTTGAGTGGTATCACTGATGTGTATCATTAGTGTTCTTATATAGTTTTTTGAATTCTCTTCTGTGAAGGCAAGTTAATTATTCCCTTTACAATATTTTGGATTATTTGATGATTTTGATAGTGGAATTTCTACTACATTTGCTTCAGGCACTCTTAGCTTGACTGACCTTGTCAACAAAATATACAGTATTCTCCAAGAAGACTTTTTTGAAGGATTAGAACTAAATGGTAGAAAAGATGGTTCTGTGTCTGCTTGCAAGATCTTAAAGGTTATTATTGGCTCTGGTAACACCAAGATGTATGAGGTGGGTTGGATTGGTCAGGACAATGCAGAGACTAACACTTCAGTTCTTCAAGCCGATGATCTAGTAATTCGCAAGAAGGCACGTGCTAGTCGTAGCATGCTGAAAATATATATTAGGGAGTCAACATCACAGAATTCCCCATGGATTATACATGCAAATCTTGCAAAGAAATATGGAATACCCACTGAGCCCCCAAAAGACTTATTGGTAACCATCTTCCCTCATTTTATTTACTGTGTTCCTTATTATCTTAAACCTAAAGAAACCATGGCTTGTAGAATGGTCAAGGGTTGCCAAAACTGAGGAGAGGACTCGAGAATGGAACCACAGATGATGTCAGAAAAAAATTGAAGAAAGGTGACTTAACAGATAACCATGTCATCCTCTCAGTTCATTTGATGTTCCATACAACTACATTTTTGCCCAGCTTCTTATTGTTCACTTTTTGCATGACTATGCAGGTGAGCCAATTGATGATCTTTTATTAAGGCCTACAGCAGATGATCCCAGTCTGTCAAAAAGACGTCCACTGTCTACAGATTTCAGAGTGCCTGTAGATTCTGTTGGGGATCTACTTATGGTTTGGGACTTCTGCATGACTTACAGGAGGATTTTATGCTTGTCTCCATTTTCCCTCTCGGACCTGGAGAATGCAATCTGCCACAAAGAAAGCAACCTTGTTCTTCTTGTGGAATTACATGCTGCACTCTTCCATTTGCTCATTAAAGATGGAGGCGGGTATTTTATGTTTCTCCAGAACAAGAGAAGGAAATTAAAGGTGACTTTGCCTTATCCATCATTTAAGCATGCATATTTTTTTGTCCTTTCTTGTTAACTTGCACTATGCGTAGGTAACATTGGTCACCTGGGCTGAGTATCTATGTGATTTCTTGGAAATGACAAGTAAAGAAGAATTCTCCAGTAGTTTATCAACTGTAAGAAGGGGGCATTATGGACTTGTTCACACTGCCGTGAAGCTTAAAATTCTGCGGGAACTGGTAGATGAAGCCATAACAACTTCTGCTGTAAGACAGAATATAGATGAAAAGATTGACCAGCAACAAGCTATTGCAGCATCAAAAAGAGAGCTTGCTAGAAATAAAAAGGAAGAGCATAAGCTGGCCATGGAAGGGGTGACAGAAAAGGAAATGAGTCAGACAGATGCTGCAGAAAATGTCAACGGGAATGTAAATGGTCAGGTTGTGGAAAAAGAAGGAAAGGAGAAGAAAAACATTTATGCCAACAAGATGGGAGAGGGGAAAGTACATCCTGTGAGAACCTATACCCTTCTTCATGTGAACTTGCATATGCACGTTCATTCTTACATATGCAAATGCATGTCTCTGCTGAAGCTATCCATGACAGCAGGTGCAAGTCTTGTTGCTAATCTTTGCTTTTTCTGCATAGCAGAGGCACCTTGGAACAGAAATGGAGAAACAATCTGTACAAAGCAATTCCCTTGGAAAAGACAGGTACTACAACAGATATTGGTTTTTTAGGCATGAAGGACGACTTTTTGTCGAAAGTGCAGATTCCAAAGAATGGGGTTACTACAGCACTAAGGAAGAGGTGATCACTTTGCAAACTTTGGGAATCCCTATGTTTTATTTTCTGGCTAACAGTTCTGTTTCAATTTGTAATCCACAGCTTGATGCGCTTATTGGATCGTTAAATGTTAAAGGCATAAGGGAGAGAGCACTGAAACGGCAGCTTGATAAGTTCTATAATACGATAAGGTACTCAATTTTCATTCAAAGAAAAAAATATAAGATAATTCACTCATTGCTGTAGTTGGGTACTTTTTACATGTTTGATGGTTGCTTCTGTTAATTTTTGGAAGTGACAGATTAGCTGGAAAGAAGTTAATCATCCCATGTCAATTTTTTGAAGGCCTACATCTAATTTTTTTAAAAAACAAAATGTTATTTAATGTAGATAATGGTCCAGAATGGTCTTTACTGGTGGAACATTCAGTTCAAGGCCTAAATAACACACCGTAGCCTCCATTTTTCACTGAATGGATGTGCTATACTTGCTAGACATGATCGAAGCTCCTAAAAATAGATCTTGAAAGATTAATCATTGAGTGTAGGTTTTTTGAGACCTGTTTGCCTTACAGTTGCAGTCTTTATTTGTACAAGTAAAATGTTCTTTGTGTGTTTCTCAAACATGAAGGAAACCTTAAGCATGGGCACCATATGCTCTCATGTTACTTTTCAGCCTGTGGGCATTGGACACTTAGGCTACCGTTTCGTTTTATTATGGTGAACTCTTTGCTCTGTTTGTTTAGCAATTGACCTTTGTGTTGGCCGATGTAGCAATGCTCTGGAAAAAAGAACGAAGGACGTCACCCAGAAAATGCTACTCCAAGAGGCTGCACTGCGGCGATCCTCTCGTGTACAGGCCCAACCAAGGGATAACCCTTCGATGTTATTCCTCAAGTATGTCAACAAATGGAAGGAAAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015045