Os07g0573400

From RiceWiki
Revision as of 08:43, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0573400| Description = Protein of unknown function DUF239, plant domain containing protein| Version = NM_001066602.1 GI:115472936 GeneID:434...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os07g0573400

Description

Protein of unknown function DUF239, plant domain containing protein

Version

NM_001066602.1 GI:115472936 GeneID:4343684

Length

4449 bp

Definition

Oryza sativa Japonica Group Os07g0573400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:23838517..23842965

Sequence Coding Region

23838603..23838812,23839583..23839669,23839776..23840027,23840136..23840300,23840634..23840687
,23840843..23840989,23841551..23841928

Expression

GEO Profiles:Os07g0573400

Genome Context

<gbrowseImage1> name=NC_008400:23838517..23842965 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:23838517..23842965 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggcggcggctcggaggggatgcctggtcgcgcttctggcggtgctcttcttggcctgcgccgctgaggggggtgcggcggcggcgtcggcggcgcagcagcagcagcagctacggcggcggaggcatctgctgcggcggcagcggcaggtgcacagccacctcaggcggctcaacaaggcgcccctcgccagcatcgagagtcctgatggagacatcatagactgtgtgcacatctccaaccagcctgcctttgatcaccctttcctcaagaaccacactatccagatgaggcctgattaccacccagaaggcctgtatgatgagtccaaggttgcatcacagcagaacacccagacaatcacccaaatgtggcacaagaacggcgtgtgcccggagaacaccataccaatcaggaggaccaagaaggaggatgtcctaagggccagctccatcaggagatatggcaagaagaagcacaagagcaccccaaaccccatgtctgtcgaccctgatatgctcaatgagagtggccaccagcatgcaatagcatatgtggaaggtgataagtactatggagctaaggctaccatcaatgtgtggcagccaagaattgagcaggccaatgagttcagcctgtcccagctctggatcttgggtggttcctttgggcaggaccttaacagcattgaagcaggatggcaggttagcccagatctgtatggggacaacaacactagactcttcacctactggactagcgatgcgtatcaggcaacaggatgctacaacctgctgtgctcggggttcatacagataaacaatcagatagccatgggcgctagcatctccccactctccaactatggtggttcccagtatgatatcaatattttggtctggaaggacccaaaggagggcaattggtggttgcagttcggtaatgactatgtgttaggctactggccatccttcctcttctcctacttggcagacagtgcctccatgatagagtggggtggtgaggtggtgaactcggagcctgatggcagccacacctccacacagatgggcagtggccacttccctgaggaaggatttggcaagtccagctacttcaagaacatacaagtggtggattcatcaaacaatcttagggcaccaagtggtattgggtcattcactgagcaatccaactgctatgatgtgcagaatggcaacaatggtgactggggcacatacttctactatggagggccagggaaaaacccaaactgtccatag</cdnaseq>

Protein Sequence

<aaseq>MAAAAAARRGCLVALLAVLFLACAAEGGAAAASAAQQQQQLRRR RHLLRRQRQVHSHLRRLNKAPLASIESPDGDIIDCVHISNQPAFDHPFLKNHTIQMRP DYHPEGLYDESKVASQQNTQTITQMWHKNGVCPENTIPIRRTKKEDVLRASSIRRYGK KKHKSTPNPMSVDPDMLNESGHQHAIAYVEGDKYYGAKATINVWQPRIEQANEFSLSQ LWILGGSFGQDLNSIEAGWQVSPDLYGDNNTRLFTYWTSDAYQATGCYNLLCSGFIQI NNQIAMGASISPLSNYGGSQYDINILVWKDPKEGNWWLQFGNDYVLGYWPSFLFSYLA DSASMIEWGGEVVNSEPDGSHTSTQMGSGHFPEEGFGKSSYFKNIQVVDSSNNLRAPS GIGSFTEQSNCYDVQNGNNGDWGTYFYYGGPGKNPNCP</aaseq>

Gene Sequence

<dnaseqindica>87..296#1067..1153#1260..1511#1620..1784#2118..2171#2327..2473#3035..3412#gtccgctagccccctcctccctccgttggtctccgcccacccagaggaaaccacccgcccccggtccccggaggaaagcttcggccatggcggcggcggcggcggctcggaggggatgcctggtcgcgcttctggcggtgctcttcttggcctgcgccgctgaggggggtgcggcggcggcgtcggcggcgcagcagcagcagcagctacggcggcggaggcatctgctgcggcggcagcggcaggtgcacagccacctcaggcggctcaacaaggcgcccctcgccagcatcgaggtagcggcccgtctcctcctctcctctcctctcccaccaacatggcgcgcattcaatgcacgccgccttgctcgccatcgatttcccgtttcgttttttcttttcttttcttgctctggtcgctcgctggtatggaggggcggaaggaatgaatccatggaggtgaaaaaaaaagaaaaggcggtggtgcatttggtatggaagtcgcaaaaaaagttttgcgcttttgattgatgggtcgacttgctcgtgcttggtgatgagctcgctttggaagtgtggattgactgttcctcctcctctcatggaccatgcattggggtttcttccgttgatggaggaaaaggctcgcttttggaggaacattttatgggtgcccgtgcttctttgggttctctccacttcaagggaggaaagatatggttgctttcctttctttggaggagaacagactacagagtgtcttcttccttttctttctttcttttttttcctctgaaccattaacaaattttgcttttgttgctcaaagatttcttctttggagtatggttgatagtctacttcatggatgttttggattatctgaagttgcattggtttgatatatggaattctagaactttcttttcctattttttttacactacttttgctaaaatgagatttttccctgtctctctcaaatcattcatgtcctgaatttaggataatgttttctctttttttttcttgctttgattgcataattgacagtgtgaattcaacagagtcctgatggagacatcatagactgtgtgcacatctccaaccagcctgcctttgatcaccctttcctcaagaaccacactatccaggttcctctctctccagaacacaccactgcccctttttttacagttggggtaatgcttccccacatatcatgataacactcaatggtgcactatcaccacctttcagatgaggcctgattaccacccagaaggcctgtatgatgagtccaaggttgcatcacagcagaacacccagacaatcacccaaatgtggcacaagaacggcgtgtgcccggagaacaccataccaatcaggaggaccaagaaggaggatgtcctaagggccagctccatcaggagatatggcaagaagaagcacaagagcaccccaaaccccatgtctgtcgaccctgatatgctcaatgagagtggccaccaggtagggtagagtgtgtaatgtgttccattcaagaaccaatctccctaatagtacttaacatgttattgggattgttcatttaaatcttgtttctgctccatggtgcagcatgcaatagcatatgtggaaggtgataagtactatggagctaaggctaccatcaatgtgtggcagccaagaattgagcaggccaatgagttcagcctgtcccagctctggatcttgggtggttcctttgggcaggaccttaacagcattgaagcaggatggcaggtgagagggagaagaaaaacccacttaggtcaaaagttctattaaatgctttgttgcagcttccatttttgttcttccatgcgcccaattatgaagctcattcctccccttgcatgcgtcaataattcctgttttgcaataatgatatggtacactacgactggagaggcctttcattttaggagccagactagattatattcgtttacgaagattctttctttcatgagcaactgttttaggagctaagaatgctgtgatggccgattaaagctatatgcagtactctcttgcattgtggcttatgtctttattctctctacattattgcaggttagcccagatctgtatggggacaacaacactagactcttcacctactggactgtaagataaacatcacattcctttcaatcttcacgataattgttttttagcttctttttgtctcttgtttagatctacattcctatcttgctgttattaaactacagattagcctaatgatactgatttttgtattgcctctgtactctctgtagagcgatgcgtatcaggcaacaggatgctacaacctgctgtgctcggggttcatacagataaacaatcagatagccatgggcgctagcatctccccactctccaactatggtggttcccagtatgatatcaatattttggtctggaaggtaaaatacaagaaaccttcacatgcgtgtgtatacacacagacgaaattcatgaacggtgccagcgaatctatgcccacctgtttcttgttctttcctgaggcacctccagggcttaaggtcaaggctacaactgtggccctggcctgttttgtggacgcattcacagttgtcccccacacacgtactgtatttatgcatgctaatgcaaacactaatgatttgagttttaaacaaattttcacaggaatattctcctagagctcatgtttcttctgttaaaattttccatgtcattaccatgtgacattatgttggcatgccaccacttgcataaccaacaagatctcgctccacgtataattccgaaagtgggctatcaagctaaaataatttaaaactcgttttcatcaaagggtagatccttttcatagtgcatataatgaacacaaaaaggaaaactttatttttgcgcgtgcatgataacactaaaaggtacctacaatattcccttatcattatcctatcttctaactatgccccatggattgtggtttgcaggacccaaaggagggcaattggtggttgcagttcggtaatgactatgtgttaggctactggccatccttcctcttctcctacttggcagacagtgcctccatgatagagtggggtggtgaggtggtgaactcggagcctgatggcagccacacctccacacagatgggcagtggccacttccctgaggaaggatttggcaagtccagctacttcaagaacatacaagtggtggattcatcaaacaatcttagggcaccaagtggtattgggtcattcactgagcaatccaactgctatgatgtgcagaatggcaacaatggtgactggggcacatacttctactatggagggccagggaaaaacccaaactgtccatagtagaaatggaaaaattctatccatgcccctaacaaacccttgacacctctgtattatgcagtaaattagtttacacctcttctctttttctcctcttggtttttgttttggtttcaccattttcccaccaggttattaacttctaggtaagtgtttgacatgtgaaatttgttctcttcctcagagatgttggtctggctcttgggaggagtgcggtcaagtttctgaagagaaacaggcctgtttggttggttggtttgtgcacttgtgcctcatgttttgtcaaatattttttgttttctcccatgcatgccttcaacttgattgttggagccttggaggtactgcacttgttaagttgaattcaattaattaagctgttggtgcatgtgtgtggcctttggttaatacctgtaccagtatgggtttttctatcctgaaaaaagttgctaatcaagtgcttagctattggaatatgtgcaaagatgccaactttttgtgtgctacgtttggtggccacacttgggtcttctggaaagcggcattaaagttggttaagcatatggttagacctgggacttgcattctgtgaaggcaggtggagttcacattgcaagcaacagtgcaagcaccgcaccattgcttcagcaatcttcaagctcctgactattggtggccactgattgatttggttgtgagctgcctaactgaattgacatttttactggtctacggtttgattctgactactgcttctagtgtaaggcttttggatttcagtgctctagttgtggcatccagttcacaaatcacttgttcaagtcttcaagatgtaaggtttgattctgtccagctataacgcacaaggtgagatggaattcgggacgattgattttctggctggtcatttgatatgtttcatgccaaataacggtggaatgcagagcatgtctggataaaaataggagtactaaccagatccgttgacggctgcaattttgatattttagtccttttataaaactattttacaaact</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0573400, RefSeq:Os07g0573400