BGIOSGA015336

From RiceWiki
Revision as of 16:01, 22 July 2012 by 124.16.129.48 (talk)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA015336

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015336, complete gene.

LocusTag

OsI_15373

Ensembl Transcript ID

BGIOSGA015336-TA

Ensembl Protein ID

BGIOSGA015336-PA

Length

7769

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:12921872..12929640

Sequence Coding Region

12929536..12929640,12928998..12929201,12928730..12928911,12927731..12927869,12927468..12927656
,12926717..12926821,12926545..12926624,12926168..12926218,12925970..12926038
,12925259..12925418,12923291..12923347,12923139..12923195,12922579..12922635
,12922090..12922209,12921872..12922000

Genome Context

<gbrowseImage1> name=IndicaChromosome04:12921872..12929640 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:12921872..12929640 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCGGGACGCCGCGGAGGTGGAGGTGCGGCGGCGGCTGCGCGACGTCGGCGCCCGCCTGAGCTCGCTTCCGGACGACGGCGAGCTGCTCAGGTTGCTCCAGGAAGCAGCCAAATTGTTGTACAGAGTGAATCAGTGTGAGGTAGACAGAATTCACAGTGCTCTTATCCCTGTTATGAGAGCATTGATTAAGAAAGAGCTACTGGATCACACTGACCCCGGAGTGAAGCTCGCCGTAGTGTCGTGTTTAACCACGCTGATCAAGATCCGCGCGCCGGATCCCCCTTATGATGATGATGTGATGAAGGATGTTCTCAAGCTTGTTGTTGGGGTCTTCTGTGAACTGGATGATGTGGACTGCCCCTCCTATGGAACAAGGGTTTCAATGCTTGGAACTTTTGCAAGGATACGGGGTTGTGCCTTGTTGTTAGATCTTGACTGCAATGATCTGATACGGGATATGTTTCCCCATTTCTTCCGCACCGTATCCAATACTCATCAGGAGCATGTTATATCCTATATGGAAACCATAATGAAGTTTGTGATCGAAGATATTACTGATATGGAACAAGATCTAATTAAAGATCTGGCATCCTGCCTGCTTCAGAATGTTAAAAAGGAAGAAAAAGAAACTCCTCCAGCATCTTTTGTACTTGCAGAGAGGGTAATAGGACTCTGCCATGAAAAGTTAAAGCCAGTGTTCATCAAACTACTTCAGGGTGCTCCCATAACCGAGTATAGCAATCTTGTTACATCATTTCTCCAAGATGCTATAGTTGCTGGAGATAACAATGTTGGTGCTTTTATGCATGACATGGAAGTAGTGTCTCCTAAATCTTCGACCATGATGGGTAAAACTATAGGACAACCAGCAGATAGTGGGGATGAGTTGAAACCGGAAATTGTACAGGGAACTAAAGAGGCTCCTAATTCAAATAAAAAAGCTCTTGACGGTAGCATTGTTGGCTCGAGAATCAAAGTACGGTGGCCTGCTGATGAAATGTTCTACAATGGATTGGTTAAATCATTTGATGCTTCTCAGAAACACACGAGATTGTGTATGATCATGGTGATGTTGTACGGCAATCTCTTAAGGATGAAAAATGGGAGTTCATTGCTGAGGCTAGAAGACCGAAGTGATGAAGGAAGTCTGGGACAGCCATTCCAGGATGTTCACAAAGCTGCAAGCAGCCATTCTTTCGTCATCCAAGAGAAATACAATACCGTGCTAAATGAAATCGGATGCATTTCCACCGAAACCACCGGCTCACTTCTCGTGCGCATACAACCAAGAATTGTTGAAGCATTGCAACTAAATCAGAAGAGGCCTGCTATGAAGATACAACCAAGAATTGCTAGAGAATTGCAGCTTAGTCTGAACAAACATGCTAGGAAGGTGCAACCAGGAGTTGCCAGAGAATCGCAAGTTAATCAAAATATGCATGTTACGAAGGGGGTACAGAAGCATATAGCCAGGTACAATAACAACAAGCCTACTAAAATTGAAGGGGCCAATGTGGGAACAACTAAACATGCTAAGGTCAAAAGGGCAGCATTAGCTTGTGAAAATGTGGTTGGAAGGGATGTCTTTCTTAAGAGAATTGTTCGTCCATATAACCGTGTTGCAAGAGCTACTATTCAAAGTCAAGAACCCTTAGAAATGGTCGGAGGAACAATGCTGGGAAGGAGTGCTACAAAGTAG</cdnaseq>

Protein Sequence

<aaseq>MERDAAEVEVRRRLRDVGARLSSLPDDGELLRLLQEAAKLLYRVNQCEVDRIHSALIPVMRALIKKELLDHTDPGVKLAVVSCLTTLIKIRAPDPPYDDDVMKDVLKLVVGVFCELDDVDCPSYGTRVSMLGTFARIRGCALLLDLDCNDLIRDMFPHFFRTVSNTHQEHVISYMETIMKFVIEDITDMEQDLIKDLASCLLQNVKKEEKETPPASFVLAERVIGLCHEKLKPVFIKLLQGAPITEYSNLVTSFLQDAIVAGDNNVGAFMHDMEVVSPKSSTMMGKTIGQPADSGDELKPEIVQGTKEAPNSNKKALDGSIVGSRIKVRWPADEMFYNGLVKSFDASQKHTRLCMIMVMLYGNLLRMKNGSSLLRLEDRSDEGSLGQPFQDVHKAASSHSFVIQEKYNTVLNEIGCISTETTGSLLVRIQPRIVEALQLNQKRPAMKIQPRIARELQLSLNKHARKVQPGVARESQVNQNMHVTKGVQKHIARYNNNKPTKIEGANVGTTKHAKVKRAALACENVVGRDVFLKRIVRPYNRVARATIQSQEPLEMVGGTMLGRSATK</aaseq>

Gene Sequence

<dnaseqindica>1..105#440..643#730..911#1772..1910#1985..2173#2820..2924#3017..3096#3423..3473#3603..3671#4223..4382#6294..6350#6446..6502#7006..7062#7432..7551#7641..7769#ATGGAGCGGGACGCCGCGGAGGTGGAGGTGCGGCGGCGGCTGCGCGACGTCGGCGCCCGCCTGAGCTCGCTTCCGGACGACGGCGAGCTGCTCAGGTTGCTCCAGGTGAGCTCTGCCCCCCAGTTCGAACCCTTGATTTATTATGTACTATTCATCAACTCTCAAGTAATACCATTTCAATTAGAAGTAATTAGGGTGCTGCAAAAGTAGGAGTTTCGGCAATACTAGAATCTCTACTCCAGCATTGGATTGTTATAATGGACTCTAATCTTTAGTTAGCTCTCTATTGCCTTCTTTGAAAAATAAATCAAATTTTGAACAAGACTTTATTTAGCTGTTGTGTTGTTTGGCTTGACTGTGGTTACAGAAGTGTATTGTTTGGATTGGATCTGATTGACCATGTAGAGACTTTTTTTAGAATTTCTTTTCTTTTATGCAGGAAGCAGCCAAATTGTTGTACAGAGTGAATCAGTGTGAGGTAGACAGAATTCACAGTGCTCTTATCCCTGTTATGAGAGCATTGATTAAGAAAGAGCTACTGGATCACACTGACCCCGGAGTGAAGCTCGCCGTAGTGTCGTGTTTAACCACGCTGATCAAGATCCGCGCGCCGGATCCCCCTTATGATGATGATGTGATGAAGGTGACTTTCTCTTCTTCTTGTTCTTCTGGGGATGAAATGGTGGTGTTTGAGTGTATTACTGACCTTTATCTCTTACCTTGTTTCAGGATGTTCTCAAGCTTGTTGTTGGGGTCTTCTGTGAACTGGATGATGTGGACTGCCCCTCCTATGGAACAAGGGTTTCAATGCTTGGAACTTTTGCAAGGATACGGGGTTGTGCCTTGTTGTTAGATCTTGACTGCAATGATCTGATACGGGATATGTTTCCCCATTTCTTCCGCACCGTATCGTATGCAACTTCTTTCTCTGTTTTTCTGCCATACTTGTGTCCATTCTGTCATAATTTCTGTCAAATGGATTACAGAGATGTTGCAGTCCTGTTCTTGACTTTAAAAGATGCGTATGAATGACTGTGGCAGTTTATATGACATAGTTATGGACTTATGGTTGTGGAATATACAGAGAAGGTGAAGGATGCAGGTTATAACCATGTTTAAAGTTACTCTGATTCAGGGAAACATTGTAAAGATGGCTTTTCTATGTAGTTTGCATGCTTTATGCATTTCACTTAAATTGTTAAGCTGATCGGTTATACTGACCATAACACTGAAAGCATCTATGTAATTATTTTCGGTCCACACAGAACATCATTTTGCATATACATCATTCATCATTTTGTCTTTTCTAATAAAATTTAATGACACCTTTTATGGTGCTACAAAATTTCACCCCTTTGTTGTTCTTCATTTTAGAACTGAGGCACAGTTTATCCTGGTCCATAAAAATAGTGATACAACCCACCATTAATTATTCTTTGTTTCCACTGTTTTACTCCATTTGTGTGTCAAGAGCTGTCAATTGCTGTATTTTTTTTCTAACATAGTATTCTACAAAGTACACCGTGATTTGAGTTGCTGCAAGTTGAGATTATACCATTGTTCTGTTTATGAATTAACAAAATGCTATGAGATAAGAGCTCACAATGTCACTGCAGTTTGTTACTTCAAGAATCCCTCTATTTGTGTGTATATTGCAGACGCCTTTTCCTCTAAATGTGTGCATGCATGTTTTTGTCTTGTGTATGCTTTATTAAAATTTTCAGGTGCTTTTATTACCCTTTCATTCCTTAACGTTTTTCATTTATTTCAGCAATACTCATCAGGAGCATGTTATATCCTATATGGAAACCATAATGAAGTTTGTGATCGAAGATATTACTGATATGGAACAAGATCTAATTAAAGATCTGGCATCCTGCCTGCTTCAGAATGTTAAAAAGGAAGAAAAAGTAATTTGGTCCATACATTGTTTGTATCAACAATATAACATCATCTTCACTAAAGTTTTCAACTTGGCTTGTAGGAAACTCCTCCAGCATCTTTTGTACTTGCAGAGAGGGTAATAGGACTCTGCCATGAAAAGTTAAAGCCAGTGTTCATCAAACTACTTCAGGGTGCTCCCATAACCGAGTATAGCAATCTTGTTACATCATTTCTCCAAGATGCTATAGTTGCTGGAGATAACAATGTTGGTGCTTTTATGCATGACATGGTCAGTTAAACTGCTTTACTACTTCTACATATTTGGATAATATTTTTGCCCTAATGGTTACTGCCCCAAAACATAGGGTTCCTTGAAAAAAAATTGTAGTACCTATGGTTTTGTGCTATGAATGCCTTGAAAACTGGGTTTTGTGAAATTTAACCTATATATTCTATGTAATATATTTCCAACTAGCTGATCATTGCAATATTACTATCATGTAACCAACACACTGATTAGGATTTCAATTTTAAAGTAATACTTTTATTACCAGCCAATATATTGAGTTGTTTGCACTGCACACCACACATGCATGGGTATTACCAGTTAAAGGTTGAATATCTGTTTTACTTAATCATAATTCACTTTTGGGGGTCTTCGTATTTGAAGTGGCTGGTGGAAACTACTGTTTACAGTTAGTAGAACCATAGCTCATCGTTTTCAAATGTATAGCTTATATCCCCATTGTTTGATGATCATTGTGTTGTTGAAAAGTTTATCATCTTCATTTGAACAAAGTTCTACAGCTTTATGATTGGCAATGGTAATCTGTCACAGAGAGAGTTCATAGAGTTCTAACAGTTGTATTGAAAGTTTTGTCCATGCTATGATCATCTTATTGGTCAACTGCACTGACTATTTCATTATTAAGAAGGAAGTAGTGTCTCCTAAATCTTCGACCATGATGGGTAAAACTATAGGACAACCAGCAGATAGTGGGGATGAGTTGAAACCGGAAATTGTACAGGGAACTAAAGAGGTATGCGTGCCTGATTGCTGAATGTCAAAAGTAAACATTATTGTTCCACCATGCTCTCTGTTTCAGTTACAAGCTTTATGTCCTCTTGTCAGGCTCCTAATTCAAATAAAAAAGCTCTTGACGGTAGCATTGTTGGCTCGAGAATCAAAGTACGGTGGCCTGCTGATGAAATGTAAGTGTGATAATCATCAAATATGTTTCTTATTTGAAGAGATGTTCTAAAACATGCATCTATATTATAATTAGTGCTCAATGGTTTGTTGTTTATTCATTTGACTTGTTTATATAAAACTTTTGGCGACTTAAACCTGGTGTATGGAGCTATGTACCAATGTTTTACCATTTGCTATATTGTTCAATTGTTAATGCTGGTTCTTATTGAACTTCCATTGCTTTAGTCCTCTGGTTTTATAACGAACTCTCATGAGTTATACTGGAGTTATGTGTGTATGTTTTAGGCTTTTCTTATTAATTTTGAATTCATTGCATGCTCTGCAGGTTCTACAATGGATTGGTTAAATCATTTGATGCTTCTCAGAAACACACGAGGTGAACATTTGCATGTGGGCTTCGTCTGCACTTTCCATGCTCGATTTATTAATTTGGGCACCGTTTCTTTTGCTTCCTTTCACTTGACTTCATATTTAGATATTCTCTTTTCTTTTGTTTGAAACCCAGATTGTGTATGATCATGGTGATGTTGTACGGCAATCTCTTAAGGATGAAAAATGGGAGTTCATTGCTGAGGTATGTCCATGGGGGCATGTGGTGTGCAATTATTTGTGTTCACTTGCTCCTTTATAATTCAGCTGCTATCCTGTAGGAGCAAGACTACAACCCCGATGCATCCCCCGACATGTATGTAAAATATCTACTTTGCACCTTCCGTATGTCCTATGCTTGGATGCAGTTCTGGTCAGGAAGAAGTCGAATTTCCAATTCTGAACTTTCACAGTCGTTCTCACAGAAGTCTGAAAATTAACCTGACCTTCAAAATCAGATCTTATGACTACCAGCCTCTTCAGACAGCCAAAAATTGATTATTGATTTGCAATTTTCTGGTTTTCAGGGACTATACTAAAACCCTAAAGTTGACTTATTTGTATTGCTGCCTTGTTGTTTTGACATCTCCACAAATATATATCAATCAATTAATCAAAGTATCGTTGCTTTGTTTCGGATCCTTCCCCCATTACACTCTTTTGTTGCTGATGTTCCTTTTTTTGTTCATCAATTCTGTCAAATCCTACTGCAAAAAAAAAGTTTCTTCAATTTTGAGTCGCTGCTCATTCAACCAGGCTAGAAGACCGAAGTGATGAAGGAAGTCTGGGACAGCCATTCCAGGATGTTCACAAAGCTGCAAGCAGCCATTCTTTCGTCATCCAAGAGAAATACAATACCGTGCTAAATGAAATCGGATGCATTTCCACCGAAACCACCGGCTCACTTCTCGTGCGCGTAAGCGGCTGGGAAAATTGCCACCTTGAGCCCGAAAAAGTTAGCACGGTGTACACAGGGCAGCTCCCGTCAGCCACAGCACATAACCTCTTTGCAGAAAAGCCTCAGTCCTTCAGTTGCAAATTGCAACACACAAGCCTATAAATCGTGGACTCGTTCCACCCGATGTAAGTTATTCGATTTTCAGCGCATAGACAGTTATGATATGATTCCACATGTTCATAGCTTACCTACACATATTCATGTAAACAAGAGACATTAAACCTAGCACGCTAAATGGCGCTGAACACTTTTTTCTTCTATTACAGGAACAGCCTACAAGGTTGCATCGCTCTGAATCAGTATATATCTTTTCTTTGTTCATCTGGAGGTGTCCATCAAATTAATGAAGATGATCCTCTACTTAACATGGTCGTAATCAGTATTTTACGGACCAAGAAAGAGCTGAGTTCTGGATGGCGAAATCTGTGCAGTGTCTGTCTATATAGATGCCATCTTGGAGCTATTCTGCCTGTTCATATTTCAGTTCCATTTTGCCTAAAACCGCAAGAGCCGTTCTGGATGGTGTGACCGACTAATCCAAGTTATGAAATATGTGCCCTGCATATAGATTCCTGTATATATCTCAGATTCAGTTCCTTTTGCCTAGAACTCACCTATGCACAATCCTCTTATGGACGTCTTGACTAAGCTGAAGGAATTGTGTTCAATTCTTGTCACCATGTGGTACTGTATGTAGTATCTTGTTCTGTGGCAAAATTGGTTTAGTGACGCTGAATTTCAACTGTGCTCAATTTTGATGTTTGGACTATGCAGGTTGGTCTACACTGCAATCTAGATGTGTAGTAACACTAAAAACCTACTCCCTCCGTTTCACAATATAAATCATTCTAGTATTTCTCACATTCATATTGATGTTAATGAATCTAGATAGATATATATGTCTAGATTCATTAACATCAATATGAATGTGGAAAATGCTACAATGACTTACATTGTGAAACGGAGGCAGTACCAAACCTACTAGAGAGGGTGAAGGGTAGGAACACCAAAAATTACATAAATAATTCATGTATTACTAAAATTATAATATAGCTCTGAAAATTCCACTAAAATTTCATATAGTATTTTAGTTTATGGATAATTTAGGAAAAATAACTCGCACCGTGATTTATTAATAATTTTTTATTCCCCTGTTTACTTCATTAAACTTAATTCATTTTTGCACATTATTATAAATTCTAAAAACATTAAGTAATTTTTGACAGCTTACAAATTCAGGCCATGGTGCTTTCAATCATGAACTTAAGACATTTGCCGGTTGGTCTCTTATAAAAAAATATTTGTCCCGGTGGGTCTCTTATAGAAAAACATTTGTCATGATATATCATTGGATTAGTTCATGTCAATTTGTCTTTGGTCTCAATGACGAACATCTCATTTTTGTCACTAAGCAACACAATCCTCCTACCAAACGTCATAAAACTAAATGGCATAATAACGAATCGAGGATCGACTTCGTCACTGAAAGTAACATGTGTTTTATATTAAGTCTTGGTTTGCCAGGAACTAAATCAACCAGCAACAGCAACAAGCTTATAGTTGGAGCAGCAGCAAGCAAGCACATAGCACGGAACAACAAGTATGTGCTTTAAAAGAAGGGATGCAACAGCTGGAAGAAAGAATGGAAGAACGAATGGAGAGACGACTTGCAGAGAAAATGGCAGAATTTAAAGCTATGAAGCATACTTCTCCTGAACAAAGGCATTCCTTGAACAAGCCAACTGAGGAGCACTCATGCTCATCCGCCTCAAACAATATAAAAGATCATAGTTCATTTTGCATAACCTCAATTGTACTGGTATTATTATTCAGGAACTATAAACTTCTATCTTTTTTCCTTGATTTTAGATACAACCAAGAATTGTTGAAGCATTGCAACTAAATCAGAAGAGGCCTGCTATGAAGGTAACTTCAATGACATTTACTTTTCTCCATATTTTTCAACTCAATGTGCTAGTCTAGTTTCATCTAATGGTTTTTTTTTCCTTTGTTGAATACAGATACAACCAAGAATTGCTAGAGAATTGCAGCTTAGTCTGAACAAACATGCTAGGAAGGTGAGCTAATGGAAACTAATTCATTTCCTTCGTTTGAAGTACTTCTAGAATAGTCCTAAAGTTAGAACATGGTCTAGAATAGTCTAGAAGCTGGTGCATGTTAGTTTAAAATATGATTTTTGGTGAATGAAATGCAGGTAGCCATCTAGCTTGCTTGTTGCTTTATTCTTCTCCTAGCTAGTTGGTTGCTTTATTCTTCTTTGTTTGTCCCCTGCTCAAGCTCTTCTCGAACAGATAGTAGTTGTGCTTAGTACGATGCACTAACAATAACTTCGACTTTACTTTATCTTGTTCAAGTCAATGCACCAGTATTGTTTGCGGCATTAAGAATTATTTTTTAAAATACAGGTACAACCAAGAATTGTTAAAGAATCTCAGCTTAATCATAACAGACATGATGGGATGATGAGTGAATAACGATGACTTTGCTTCATATTTTTCAAGTCAATGCACTAGTATTATTTGGAATTAGTATAGACTTATTTATTTTTTGTTGAATATAGGTGCAACCAGGAGTTGCCAGAGAATCGCAAGTTAATCAAAATATGCATGTTACGAAGGTGAGCTGAATAACATCGATTTTACTTCATTTTTCAAGTCAAACTGTAACATATCTTAAGTCTTGTAGGATTCATTGAGAAGGGTTGATGCTACATGTAATGTACAACAGGGGGTAGAAAAAGATGTGGACAATCACAATTGTACCAAGCAACCAAAAATGACAAAAAAAAACGTTGTGGAGAAACAACAAGCAATCATGCCACAAGTAAACGCTCTAAAGTTCCAACTGTGATCACTCAAATTGCTGCTGAAGTTTGTATATGGATATATGGTATTTATTTGGAACGCACTATATTACCACCATGCATTTCTGTTGCTTAATGCATGCTAATAGGTTGACAACAGTAACATCTTCTATTGTGTAACAGGGGGTACAGAAGCATATAGCCAGGTACAATAACAACAAGCCTACTAAAATTGAAGGGGCCAATGTGGGAACAACTAAACATGCTAAGGTCAAAAGGGCAGCATTAGCTTGTGAAAATGTGGTTAGTTCTTTTTTATTACTACAAAACAGTAGCAACTATTCTACTTTCTACTCTGTAATAAAATCTGATGTGGCTACATTTTGAAATAGGTTGGAAGGGATGTCTTTCTTAAGAGAATTGTTCGTCCATATAACCGTGTTGCAAGAGCTACTATTCAAAGTCAAGAACCCTTAGAAATGGTCGGAGGAACAATGCTGGGAAGGAGTGCTACAAAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015336