Os07g0573700

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Revision as of 08:43, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0573700| Description = Nucleotide-sugar transporter family protein| Version = NM_001066604.1 GI:115472940 GeneID:4343687| Length = 5051 bp|...")
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Gene Name

Os07g0573700

Description

Nucleotide-sugar transporter family protein

Version

NM_001066604.1 GI:115472940 GeneID:4343687

Length

5051 bp

Definition

Oryza sativa Japonica Group Os07g0573700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:23847452..23852502

Sequence Coding Region

23848012..23848069,23848158..23848252,23849029..23849077,23849165..23849224,23849317..23849438
,23849536..23849577,23849681..23849729,23849832..23849903,23850375..23850475
,23850572..23850647,23850739..23850818,23850933..23851044,23851128..23851191
,23851277..23851340,23852281..23852307

Expression

GEO Profiles:Os07g0573700

Genome Context

<gbrowseImage1> name=NC_008400:23847452..23852502 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:23847452..23852502 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtacaggagagtgaaggaccaggagagctatgatgttgtatctcagaaagacatagaaagccctggtgagaggtctctttctagcacttcagcaacctccagtcttagcacagcaggagcttcaaagggcaagaatagttggaagttaaagtccattgttacacttgcattgacattactaacaagttctcaggcaatactaattgtgtggtcgaaaagagctggaaaatatgaatatagtgtcactacggcaaatttttcggtggaagctttaaaatgtctgttatctctcatagccctgtacagaacatggaacagtcagggtgttacagaagataataggttaagtacatcgtttgatgaagttagtgtttatcctattcctgccatactttacatggtaaagaatttactgcagtattacatctttgcatatgtggatgcaccagcttatcaaatcctgaagaacctgaacattattagcacgggtgtgttataccgcatcattctaaagaaaaagttaagtgaaattcagtgggctgcatttattcttttatgtgccggttgcactacagcccagctgaacccctcgtcagatcatgttctgcaaacccctattcaaggttgggtgatggcaattgtgatggctcttctaagtggttttgcgggggtatacacagaagcaatcatcaagaaacgtccttcaagaaacatcaatgtgcagaatttttggctgtacatttttggaatgctcttcaatttagttgcaatttgtgttcaggacttcgatgctgtcatgaataaaggtttttttcatggctactcattcattactgttttgatgattcttaatcatgcactcagtggcattgctgtatcaatggtgatgaaatatgctgacaatattgtcaaggtgtactcaacttcagttgccatgcttcttacagcagttgtatctgtctttttgtttggcttccatctatcccttgctttcttcctcggatctacggttgtttctgtctccgtatatctgcattcagttgggaaaccacaaccgcagaaatga</cdnaseq>

Protein Sequence

<aaseq>MEYRRVKDQESYDVVSQKDIESPGERSLSSTSATSSLSTAGASK GKNSWKLKSIVTLALTLLTSSQAILIVWSKRAGKYEYSVTTANFSVEALKCLLSLIAL YRTWNSQGVTEDNRLSTSFDEVSVYPIPAILYMVKNLLQYYIFAYVDAPAYQILKNLN IISTGVLYRIILKKKLSEIQWAAFILLCAGCTTAQLNPSSDHVLQTPIQGWVMAIVMA LLSGFAGVYTEAIIKKRPSRNINVQNFWLYIFGMLFNLVAICVQDFDAVMNKGFFHGY SFITVLMILNHALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFF LGSTVVSVSVYLHSVGKPQPQK</aaseq>

Gene Sequence

<dnaseqindica>4434..4491#4251..4345#3426..3474#3279..3338#3065..3186#2926..2967#2774..2822#2600..2671#2028..2128#1856..1931#1685..1764#1459..1570#1312..1375#1163..1226#196..222#agtcgccaccctcgcggcctcgccgcgtgctcctttactgctctctgctcgcgcaggagggcccacctttcagcctccgtcacgtcaccggctccgcctcccgccgattccttcctccccgtggaagcaacccgcagcggcggcgacggcagcggcgtcggcggcggggacgaggtggggagtcgagaggaagagatggagtacaggagagtgaaggaccaggtaagcaccaaccccaagtcccgcccaaccctaatggagagagagagagaggaatgccactcgcgctgatgcgtccgcgcctccagattagatcgctgcaacgggtgttccctttttgcgattttcgctggcccttttctgttcctcacttagggttctagaatttccggattttcgggcgttttgcggctcttgatgtcagtgagacggtggcttttgtaatccaatcgttttgaactctgaaaaaaatgtagcaaatgaaacaggatagtgactactagttcatattgttattaacaatgtagcggtcattcaaccgcatttttagatttaagacaatttatctgattactggtactccctccgtcccataatataagggattttgagtttttgtttgcgctgtttggccactcgtcttattcaaaagtttttgaaattattatttattttttgtgacttattttattatccaaagtactttaatcacaacttttcgttttttatatttgcacaaatttttttaataatacgagtgatcaaacagtataagcaaaaactcaaaatcccttatattatgggacggaggaagtagtaagtagtaaagtgaccaatgcttaattcctgtattgtaaatagtaaactgaagatatagataacggcaagtttggtgattgtgatttgggaaactggtggtgctttcaatcacctgtcagtggccaaacctggcagatgctctgtggtttaaacttgaaattcgacttagatttgcctggtctttttagttctgttgatgtttggcaagcaggtgctgataatcatcaatctggcaaatatattcaaccatatatgtttggagtcatgagcattgcaattaagcttgtacttcagctgttgttctgtttgctaacaagttatgtatctgctgtactgtctaaaggagagctatgatgttgtatctcagaaagacatagaaagccctggtgagaggtctctttctagcagtaagttgtcgattcctcatagaaactttttcttttgatatccataaccaggactccaatatccttatgatcttaccatttacagcttcagcaacctccagtcttagcacagcaggagcttcaaagggcaagaatagttggaagttaaagtaagacttaattattgcaatctttgtcatcaaatagcatacttgtgaaaatcaattgatttattagtaatgcgttgtggcaggtccattgttacacttgcattgacattactaacaagttctcaggcaatactaattgtgtggtcgaaaagagctggaaaatatgaatatagtgtcactacggcaaatttttcggtgaggaaaatttcacaaattccgcttggtgactggtgacagtacctccaacctccaggaccattcttttgtttctattggtataagaatgtattcctttgtatatatgtataggtggaagctttaaaatgtctgttatctctcatagccctgtacagaacatggaacagtcagggtgttacagaagataataggtgatgattctatcataagctgctgtttaatttcatgctagtgtttgttgtctttatcctactctttagcaatttgttgtcaagttttcaggttaagtacatcgtttgatgaagttagtgtttatcctattcctgccatactttacatggtaaagaatttactgcaggtatgttcagttgtccagttctttcatgctaaaagtatttttctgttcacaatagaaagtgtttgatacatttctccacttcctgctacctgtcagtattacatctttgcatatgtggatgcaccagcttatcaaatcctgaagaacctgaacattattagcacgggtgtgttataccgcatcattctaaagaaaaagtaagctttccactctccagaatattcaaggttataacctaacatatcggcaactctgaaaaaaaatgttaatttacctgctcaccaactggaaaatgttgcattattctttatcaacatcaaccttgaagttgggaatatatagctggatataaatctgccagaaaggtgctatatttatatcacaaaagtcatgtactaaagttcaattgcacactataaatttcatcattgtaagtagagccacacaaacatatcataaaaaaactgcttgatttctttgtgctgttttgtgtttagcagatgtggtgagatattaatattacttagaacattttattttggcatgctaaatgttccggtagtttacttagccttcttacctgaccttcataatcacgatgtgctttaaaatctaaattacttcaatttcctcttcacgatgtgctgaatgtattgtgttctttccaggttaagtgaaattcagtgggctgcatttattcttttatgtgccggttgcactacagcccagctgaacccctcgtaagcaaaatatgttatgattcgtctgtgttcattcttaacaatattcatatttcttcaaaacatcatggtcaattactaaaataatttgttattttccaggtcagatcatgttctgcaaacccctattcaaggttgggtgatggcaattgtgagtcactaggattggaaataatcagtcagttatttacaaatgttacacgatgtgttttttactccaccaatggaattaatggaagtgctttcttctgcaggtgatggctcttctaagtggttttgcgggggtatacacagaagtaagtgactttactacactgttatttgccccttttatatttacctgactttacgaagatttatttgatgtggattgttcgtgtttgaccaatgcaggcaatcatcaagaaacgtccttcaagaaacatcaatgtgcagaatttttggctgtacatttttggaatgctcttcaatttagttgcaatttgtgttcaggacttcgatgctgtcatgaataagtttgttctgacaaaatctatctactcatgctaatattttgatatgtttcattctatcagccattttaacttgattgtgcaatctaatgcagaggtttttttcatggctactcattcattactgttttgatgattcttaatcatgcactcaggtactaatagctggatcctgttttgtctgctctcttttgaggtttatataccacattgtattgttttactttttttttgctttgcagtggcattgctgtatcaatggtgatgaaatatgctgacaatattgtcaaggtacaaatgctgaacttctaaagctggcttagaattcaaccatgttgcatttgtatggccttagaattcaaccatgttgcatttatatggtcttagaattcaaccatgttgcatttgtatattcttttctcagcggattatgcccaatagagatattttgcatcttcctattgtgaatgtcctgttacgagtttaagtaattctggactgtgaaatacatcttacattttattcaacactacggctgttttgccttacctgaatcgcttacagtctactatacattacacctcaaagcacattttgttttatacatctctgtattccttaataacaccttaacaacatcttctattgtgttgtgtccatgcgcatgcctgtctggtgaattattctttatacttacattttctacattctgatatatgagaaactatgccattccatattccatacctgtctgaggagctattttagtgaacagatcatccaggcctctaaacaggacattggatggttgattgtatcctgttgaaaaaagataactataatgcacaagcctctcttttggattcaaaaccttgtgatacgtgaggcacatgtataactaaatttcataaaatgtcaactgaagattcttgtataattattgatgcagcttcaaagactgacttgatttacacaccaattactgtctgctgaaaatattttgataacactgtaatgtttacgcatcttttcatcagacatttgtctgacatataactgtaatgcaggtgtactcaacttcagttgccatgcttcttacagcagttgtatctgtctttttgtttggcttccatctatcccttgctttcttcctcggatctacgtaagtgcttattgaagtgaacaacatattctcttgattggagcccctgtaacccatgatagtaatcagctcatgctataattttcagggttgtttctgtctccgtatatctgcattcagttgggaaaccacaaccgcagaaatgagctttactttcatggcttcatcttttgaagtatcggcaagtggcagcatagaatgatttttgggtggcaccgttggtactactgcagaatgccggagaagagattcattcttgaccatctgactactcttgagtcttgagccaacttcttgatggatttcggactttacctccaagccgagccaaccagccgacgatcaatgcagatctactgaagttttgaccgcttgactgatgatttgaagctctcttttgcccgtccccagatgcttgccatttatttcttactcctaattcatttcagcctactatagcgaagagcgtatgtgctaccacgtagcaaacattttctgacaaacaagtatgtcatatcattatctgtagttctttggagcattatctgtagtttgtacaaatacgaaaggatgattcacccaacttgcggcagcttctctggccactgttcttgtcattatttgagcccaaaggggtgggattcagaaacatcatcacagtggtgtggaccggcccatagggtgaattcatctatattaatttttg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0573700, RefSeq:Os07g0573700