Os07g0576500

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Revision as of 08:43, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0576500| Description = Similar to Indole-3-acetic acid-amido synthetase GH3.4 (EC 6.3.2.-) (Auxin- responsive GH3-like protein 4) (AtGH3-4) (...")
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Gene Name

Os07g0576500

Description

Similar to Indole-3-acetic acid-amido synthetase GH3.4 (EC 6.3.2.-) (Auxin- responsive GH3-like protein 4) (AtGH3-4) (CF4-like protein)

Version

NM_001066620.1 GI:115472972 GeneID:4343704

Length

2029 bp

Definition

Oryza sativa Japonica Group Os07g0576500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:23985357..23987385

Sequence Coding Region

23985417..23987285

Expression

GEO Profiles:Os07g0576500

Genome Context

<gbrowseImage1> name=NC_008400:23985357..23987385 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:23985357..23987385 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tgtctcggccatcggcgcggccctccgatccccggcggcgacggtaagcgaggccgacgtcgagaagctccggctcatcgaagaactgacctccgacgtggacgccgtgcaggagcgcgtcctctcggagatcctcggccgcaacgccggcgcggagtacctcaccaggtgcggccacgacgccggcgacaccggccgcgccaccttccgggccaaggtgccggtggtgtcgtacgacgacctgaagccgtacatccagcgcgtcgccgacggggactgctcgcccgtcctatcgacgcaccccatcaccgagttcctcaccagctccggcacgtcggccggcgagtgcaagctgatactcgtcgccatggacgactccggccgccgccaggcactgcacggtctcattggacctgtcttgaaactgtaagtcaacctcttctacatggcacttcgccagtccgaagaaaagtgatatcgaacatttcgcaatgtatatatagatatgtccctgggcttgaaaagggtaaggggctctacttcatgttcgtcaagtcagagacgaagacacgaggcggcctcacggcgtggtttgccctgacgagcgtctacaaaagcgagcaattcaagagcatggcaattgcctacacgagccccacggcggccatcctctgcgaggacgcgttccagagcatgtacgcgcagatggtgtgcggcctgtgccagcgccacgacgtggtgcgcttcggagctgtgttcgcggccgcacttgttcgggcgatccgcttcctccagctcaactggggccagctcgccgcggacatcgaggccggcgagctcggcccacacgttgccgatccgtcggtgcgcgaggccgtctccgggatcctccggtcggacgccgagctcgcggagttcgtccgcatcgagtgctccaagggtgactgggccggcatcatcacgcgtatttggccgaacaccaagtacgtggatgccatcgtcaccggcgccatggcacaatacatccggaccctgcagtactacagtggcggcctgccgatcgtgagcacctcgtatgcgtcctccgagtgtttcttcggcatcaacctccgccccgtgtgcgacccgtccgaggtgtcctacaccatcatgcccaacacggcctacttcgagttcctcccggtcggcgaggtcgtcgacgcgaccaacctcgtcgacctcgcccgcgtggaggtcgggcgggagtacgaggtggtgatcaccacctacgccggtctgagccggtaccgcgtcggcgacgtcctccgcgtgacggggttccacaacgcggcaccgcagttccggttcgtgcgccgccaaagcgtgctgctatccgtcgagttagacaagaccgacgaggccgagctgcaccgcgcggtggagcgcgcctcctcggcgctcctccgcccgcgcggcgtgtccgtcgcggagtacaccagccgcgcgtgcaccgaacgcatcccgggacattatgtggtctactgggagctactgaccgagtcacccgtcggcgccggcgacggtgacacggtggacggggagacgctcggcaggtgctgcctcgagatggaggaggcactcagcgcggtgtacaggcagggcagggttgcggacggctcgatcgggccactcgagatccggatcgtccgtcccggcacgttcgaggaggtcatggacttggccgtctcccgcggcacgtccattgggcagtacaaggtgccccagtgcgtgactgtcccatccgtggtggagctgctggactcgcgcgtcgtgtctagccaattcagccctgccctgccgcattggatcccgactccacgatccgactag</cdnaseq>

Protein Sequence

<aaseq>CLGHRRGPPIPGGDGKRGRRREAPAHRRTDLRRGRRAGARPLGD PRPQRRRGVPHQVRPRRRRHRPRHLPGQGAGGVVRRPEAVHPARRRRGLLARPIDAPH HRVPHQLRHVGRRVQADTRRHGRLRPPPGTARSHWTCLETVSQPLLHGTSPVRRKVIS NISQCIYRYVPGLEKGKGLYFMFVKSETKTRGGLTAWFALTSVYKSEQFKSMAIAYTS PTAAILCEDAFQSMYAQMVCGLCQRHDVVRFGAVFAAALVRAIRFLQLNWGQLAADIE AGELGPHVADPSVREAVSGILRSDAELAEFVRIECSKGDWAGIITRIWPNTKYVDAIV TGAMAQYIRTLQYYSGGLPIVSTSYASSECFFGINLRPVCDPSEVSYTIMPNTAYFEF LPVGEVVDATNLVDLARVEVGREYEVVITTYAGLSRYRVGDVLRVTGFHNAAPQFRFV RRQSVLLSVELDKTDEAELHRAVERASSALLRPRGVSVAEYTSRACTERIPGHYVVYW ELLTESPVGAGDGDTVDGETLGRCCLEMEEALSAVYRQGRVADGSIGPLEIRIVRPGT FEEVMDLAVSRGTSIGQYKVPQCVTVPSVVELLDSRVVSSQFSPALPHWIPTPRSD</aaseq>

Gene Sequence

<dnaseqindica>101..1969#acccacctgctgcagttttatattgaattcggacagcagtcaccactccctcagtccctcgtcgcgtttcgtcggagacaatggcgacgccagcacctgatgtctcggccatcggcgcggccctccgatccccggcggcgacggtaagcgaggccgacgtcgagaagctccggctcatcgaagaactgacctccgacgtggacgccgtgcaggagcgcgtcctctcggagatcctcggccgcaacgccggcgcggagtacctcaccaggtgcggccacgacgccggcgacaccggccgcgccaccttccgggccaaggtgccggtggtgtcgtacgacgacctgaagccgtacatccagcgcgtcgccgacggggactgctcgcccgtcctatcgacgcaccccatcaccgagttcctcaccagctccggcacgtcggccggcgagtgcaagctgatactcgtcgccatggacgactccggccgccgccaggcactgcacggtctcattggacctgtcttgaaactgtaagtcaacctcttctacatggcacttcgccagtccgaagaaaagtgatatcgaacatttcgcaatgtatatatagatatgtccctgggcttgaaaagggtaaggggctctacttcatgttcgtcaagtcagagacgaagacacgaggcggcctcacggcgtggtttgccctgacgagcgtctacaaaagcgagcaattcaagagcatggcaattgcctacacgagccccacggcggccatcctctgcgaggacgcgttccagagcatgtacgcgcagatggtgtgcggcctgtgccagcgccacgacgtggtgcgcttcggagctgtgttcgcggccgcacttgttcgggcgatccgcttcctccagctcaactggggccagctcgccgcggacatcgaggccggcgagctcggcccacacgttgccgatccgtcggtgcgcgaggccgtctccgggatcctccggtcggacgccgagctcgcggagttcgtccgcatcgagtgctccaagggtgactgggccggcatcatcacgcgtatttggccgaacaccaagtacgtggatgccatcgtcaccggcgccatggcacaatacatccggaccctgcagtactacagtggcggcctgccgatcgtgagcacctcgtatgcgtcctccgagtgtttcttcggcatcaacctccgccccgtgtgcgacccgtccgaggtgtcctacaccatcatgcccaacacggcctacttcgagttcctcccggtcggcgaggtcgtcgacgcgaccaacctcgtcgacctcgcccgcgtggaggtcgggcgggagtacgaggtggtgatcaccacctacgccggtctgagccggtaccgcgtcggcgacgtcctccgcgtgacggggttccacaacgcggcaccgcagttccggttcgtgcgccgccaaagcgtgctgctatccgtcgagttagacaagaccgacgaggccgagctgcaccgcgcggtggagcgcgcctcctcggcgctcctccgcccgcgcggcgtgtccgtcgcggagtacaccagccgcgcgtgcaccgaacgcatcccgggacattatgtggtctactgggagctactgaccgagtcacccgtcggcgccggcgacggtgacacggtggacggggagacgctcggcaggtgctgcctcgagatggaggaggcactcagcgcggtgtacaggcagggcagggttgcggacggctcgatcgggccactcgagatccggatcgtccgtcccggcacgttcgaggaggtcatggacttggccgtctcccgcggcacgtccattgggcagtacaaggtgccccagtgcgtgactgtcccatccgtggtggagctgctggactcgcgcgtcgtgtctagccaattcagccctgccctgccgcattggatcccgactccacgatccgactagcaatgcatcctgtttggcatctttattttaggaaaggaaaacgtacaccgaaggtccctc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0576500, RefSeq:Os07g0576500