Os07g0577400

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Revision as of 08:43, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0577400| Description = Ubiquitin-conjugating enzyme E2 E3 (EC 6.3.2.19) (Ubiquitin-protein ligase E3) (Ubiquitin carrier protein E3) (Ubiquit...")
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Gene Name

Os07g0577400

Description

Ubiquitin-conjugating enzyme E2 E3 (EC 6.3.2.19) (Ubiquitin-protein ligase E3) (Ubiquitin carrier protein E3) (Ubiquitin-conjugating enzyme E2-23 kDa) (UbcM2)

Version

NM_001066623.1 GI:115472978 GeneID:4343707

Length

3048 bp

Definition

Oryza sativa Japonica Group Os07g0577400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:24009599..24012646

Sequence Coding Region

24009713..24010001,24010212..24010285,24012059..24012206,24012362..24012459

Expression

GEO Profiles:Os07g0577400

Genome Context

<gbrowseImage1> name=NC_008400:24009599..24012646 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:24009599..24012646 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtcgtcttcctcctccttcccgacctctcgctcccctttccccgccggcgccggcgccggcaccagcgggggcggaggaggaggaggagggggctccggcggcggaggtgggggtggaagatggagcggcgtgcgcccctggggctccagcggcggcacgtcggtgtcgtcgtcggggaagcggattcagaaggagctgatggacctcaacgcctccgactgctccgccggccctaagggcgacaacctctaccactggctctccaccatcatcggacctcagggatctccgtatgaaggagggatatttttcctcgatattgtattcccaattgactatccgtttaaacctcccatggtaactttcaagacaaggatttatcactgcaatgttgactccactggtaacttgagtatggacattttaagggaaggatggagtcctgctttaactatttcaaaggtgctacttgccattaaagccatcataacaaacccagatccatactgcccacttgtgccgagcattggacatttatacttgactgatagaactaagcatgatgaaatagctgcggagtggacgatgaggtttgcaagatag</cdnaseq>

Protein Sequence

<aaseq>MSSSSSSFPTSRSPFPAGAGAGTSGGGGGGGGGSGGGGGGGRWS GVRPWGSSGGTSVSSSGKRIQKELMDLNASDCSAGPKGDNLYHWLSTIIGPQGSPYEG GIFFLDIVFPIDYPFKPPMVTFKTRIYHCNVDSTGNLSMDILREGWSPALTISKVLLA IKAIITNPDPYCPLVPSIGHLYLTDRTKHDEIAAEWTMRFAR</aaseq>

Gene Sequence

<dnaseqindica>115..403#614..687#2461..2608#2764..2861#cccctctccgccgctctccccccactccggcgtcgctctccatccccccaccaccgccggcggcgccgctccccctcacccccaaggccaagtcgtaagccagccgtcgaggccatgtcgtcgtcttcctcctccttcccgacctctcgctcccctttccccgccggcgccggcgccggcaccagcgggggcggaggaggaggaggagggggctccggcggcggaggtgggggtggaagatggagcggcgtgcgcccctggggctccagcggcggcacgtcggtgtcgtcgtcggggaagcggattcagaaggagctgatggacctcaacgcctccgactgctccgccggccctaagggcgacaacctctaccactggctctccaccatcatcggacctcagggtatcatcgcccttccccctctccgcttactcccccctgctagcagcagccgataaagctcgtgcgaattttactgcggctctgcgaatttcactagttgaaatcgcggttttttttttttcaagtttggaattagggtgtggagtgtagagtgaactagtcttatgaccaccttcactttgctgatctaatgcagtgctcatcttgtaggatctccgtatgaaggagggatatttttcctcgatattgtattcccaattgactatccgtttaaacctcccatggtaagaactaagaattagcttcttttttttttttctgtttgcttaaatgggctgttggttatgaggtgtctggctttctacgagatcatatagaagcttaagttgtaacttgacattttctctccttgtctgtgtgcattctacctaatgctgtgattcatgagtgatcatatcgctgttattggaacaaatatctagaataaatatggcattcccttcagtaactattgatagacgactattgatttaccgcgtggaagtgtggttaaggtaacatgggaaatgcttgcatccaaagaaatgtttttaagagacatgcgcatgtctaaaatcttgaagaagtggaatagaaattcaaataggatggataattggttgggataatattgttgtatagctagttctacttcactatgtgaacagggtattacaaaagtgatgaacattggtatgtttagtaaatgcatagggtattttgtttcaaaagtctaccttcaccggacttcttttagtttcttcaaaataagtgtatgatctatgcattttagcctggaaggggtttgaaaatgtgtcgagttgtctgcaaggattaagattcatcctaaaatggaatatctcatgaatctttttggggacaaggaatgcttctgttcaagggctaactcagcaaacagtgtgatgattagaagggcatagataacaaaagagattatgttaaagctagtttattttgttattaattaaagcgacctgcgttctttttaaggtaagcaccatttacctcttttcaatatgatcttgattatttatgaagaaaacttatctgaagtctgttttatgcttagtgttcaagaaaataactgcgcagagtttctaaaatgttgttttcctagacatcccctgttttggttgatagtgctgtgttaaaattttacagagaaaggttttgtccattggaagcctaatgtgcttgggcatcaccttcatcctatgtcaatatactatttgcatagtagtctggtaaaaaaatgagccttctaaatgcagatttttggtccatttagtgttgacattgactaatcagtatacacctgctggctgtagcctacacagccctacatgatcacctgcttcatggtttgttggttgctaagacagtaagactgttactgtctttgcccagctattaccatcaacttataattccttgatgggaggtaggatatgaaggatccgaacaaccaacctccatttctgctcttcagtatttgatggagcatctggaattctcccccattctctagatagcagtgctggaagcctagggcaatgctaggactgatttgacctaacacacagccctgcagtggtctaccttttaccttaaccagcacatggaaccatgcaaacatcaatacagtccaacatggcaatcatattaattctgctaatgctacactccatataatttggcaatagtaagtgaatttctcaagtttttgtagagtggatagcacactcataatacagaggaaatacacatgggctggcaattgtggcttgatttgatgtttcagtaattaataatatggaaggtaatacactcttccagttgaacatgctaaaatttcaatattgaaggaacagcaatttcaatgtttatatagaagtatgaaacaattgagatccactgctgtaattttatccgatatttcggtattaggggacctcaattcgtggttacaagttataactgttctgtcactgtgctaggtaactttcaagacaaggatttatcactgcaatgttgactccactggtaacttgagtatggacattttaagggaaggatggagtcctgctttaactatttcaaaggtgctacttgccattaaagccatcataacaaacccagatccatgtaagttccaagttacagtatgatcacaattgttctgtttctgcactatcttccatgataaaacatgcagtcctgtttaaactatgtaatatacacataatttttgcttcatttcatcttgataacttcatattatgattgttttttccgtgcagactgcccacttgtgccgagcattggacatttatacttgactgatagaactaagcatgatgaaatagctgcggagtggacgatgaggtttgcaagatagggagttccatctgcagctaagcaagatcactaactccgtaaatgaatatatttggtgtaccctgagatgtacaatgttgggaaaagatcaatactttgtttaggttgactgtgacataagatgtacctgtgcattttatattagacaattattatgttgttagcttttaggtggcagaattggcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0577400, RefSeq:Os07g0577400