BGIOSGA015544

From RiceWiki
Revision as of 16:02, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA015544

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015544, complete gene.

LocusTag

OsI_14952

Ensembl Transcript ID

BGIOSGA015544-TA

Ensembl Protein ID

BGIOSGA015544-PA

Length

1766

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:5166971..5168736

Sequence Coding Region

5168394..5168736,5168036..5168197),complement(5167740..5167915,5167320..5167637),complement(5166971..5167081

Genome Context

<gbrowseImage1> name=IndicaChromosome04:5166971..5168736 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:5166971..5168736 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAAGAAGCGGGTGGTCATCGTCGGCGCCGGCGTGAGCGGCCTGGCGGCGTGCAAGCAACTGCTGGAGCGCGGCTGCCGGCCGGTGGTGTTCGAGGCGGACACCGGCCTCGGCGGCGTGTGGGCGCGGACGCCGGAGTGCACCGCGCTGCAGACGCCGCGGCCCATGTACCAGTACTCCGACTTCCCGTGGCCGGAGACGGTGACGGAGGTGTTCCCGGACCACCGCCAGGTGATGGACTACCTCGGCGCCTACGCTCGCCGCTTCGGCGTGCTCGACTGCATCAGGTTCGGCCACCGGGTGGCGGGGATGGAGTACGTCGGCGTCGGCCGAGGAGGCTGCAAAGGTCCAGAAGCATTTGATGGCCAGGTGATCCACTCCATGGATTACTCCAAGATGGGCACCAAGAATTCTAAGGAAATGATCAAGGGCAAGCGTGTCACGATCGTTGGCTACCTCAAATCAGCACTTGACATTGCTGCAGAATGTGCAGAAGTAAATGGTACTGAGATTCCATGTACAATGGTGGTCCGAACAAAGCATTGGATCATACCAGACTATTTTGCATGGGGCGTCCACATCTCAAAGCTGTATCTTAATCGGTTTTCTGAGCTTCTTATTCACAAGCCTGGTGAAGGCTTACTCCTTAGCATCTTGGCCACCCTCTTGACTCCATTGAGATGGATATTTTCGAAGTTTGCAGAAAGCTATTATTCCATTCCAATGAAGAAGTATGACATGGTGCCTGACCATAGCCTATTTGAGGCTTTGATTACATGCTTGGTTGCCATTACACCCAAAGACCATTACAAGAGATTAGAAGAAGGCAGCATTGTTCTGAAGAAATCAAAGACATTTAGCTTTTGCAAGGAAGGTGTGCTTGTCGAAGGCCAATCTTCGCCGATAAAGAGCGATATAGTGATCTTTGGAACTGGGTTCAGAGGGGATCAGAAGATCAAGGAGATGTTCACTTCTGAATACTTTCAGAGCATTGCACTATGCCGGGACATGGGGTGCAATCCGAGGAGGAAGAACGGATTCTGGGCTGATTTATTCGACGTTTATGGCCCTAGTGATTATATTGATCTTTTCCCCAAGAAAGAGTAG</cdnaseq>

Protein Sequence

<aaseq>MEKKRVVIVGAGVSGLAACKQLLERGCRPVVFEADTGLGGVWARTPECTALQTPRPMYQYSDFPWPETVTEVFPDHRQVMDYLGAYARRFGVLDCIRFGHRVAGMEYVGVGRGGCKGPEAFDGQVIHSMDYSKMGTKNSKEMIKGKRVTIVGYLKSALDIAAECAEVNGTEIPCTMVVRTKHWIIPDYFAWGVHISKLYLNRFSELLIHKPGEGLLLSILATLLTPLRWIFSKFAESYYSIPMKKYDMVPDHSLFEALITCLVAITPKDHYKRLEEGSIVLKKSKTFSFCKEGVLVEGQSSPIKSDIVIFGTGFRGDQKIKEMFTSEYFQSIALCRDMGCNPRRKNGFWADLFDVYGPSDYIDLFPKKE</aaseq>

Gene Sequence

<dnaseqindica>1..343#540..701#822..997#1100..1417#1656..1766#ATGGAGAAGAAGCGGGTGGTCATCGTCGGCGCCGGCGTGAGCGGCCTGGCGGCGTGCAAGCAACTGCTGGAGCGCGGCTGCCGGCCGGTGGTGTTCGAGGCGGACACCGGCCTCGGCGGCGTGTGGGCGCGGACGCCGGAGTGCACCGCGCTGCAGACGCCGCGGCCCATGTACCAGTACTCCGACTTCCCGTGGCCGGAGACGGTGACGGAGGTGTTCCCGGACCACCGCCAGGTGATGGACTACCTCGGCGCCTACGCTCGCCGCTTCGGCGTGCTCGACTGCATCAGGTTCGGCCACCGGGTGGCGGGGATGGAGTACGTCGGCGTCGGCCGAGGAGGCTGTGGCGGCGTGGGATGAGTGGGCTGGGAACGGCGACGCTTTCGGCTCCGGCTCCGGCGAGTGGCGGCTAGAGGTGGTCGACGGTGAGGGCCATATTGAGGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGAGGTTCAGTGGAGTGCCCAACATACCAACATTTCCTCCAGGCAAAGGTCCAGAAGCATTTGATGGCCAGGTGATCCACTCCATGGATTACTCCAAGATGGGCACCAAGAATTCTAAGGAAATGATCAAGGGCAAGCGTGTCACGATCGTTGGCTACCTCAAATCAGCACTTGACATTGCTGCAGAATGTGCAGAAGTAAATGGTACTGACAAATTAACAATCTGATTTCCTCCAACCATTTTTTTCAGTATTTTTTCTCTTGTGCAACTTTAGATGCTGAATTAAATTTTCCCCACTTACTAAGTGTTTCTTCTTCGTGTAGGTACTGAGATTCCATGTACAATGGTGGTCCGAACAAAGCATTGGATCATACCAGACTATTTTGCATGGGGCGTCCACATCTCAAAGCTGTATCTTAATCGGTTTTCTGAGCTTCTTATTCACAAGCCTGGTGAAGGCTTACTCCTTAGCATCTTGGCCACCCTCTTGACTCCATTGGTATGGCAATTCTGTTTTAATTATACTGCTAAAATTTGCTTTCTCTGGTTAAATTGAAGCAAGACTGATCCATGCATGTTTTTCCTCTTTGCACATGTTCAGAGATGGATATTTTCGAAGTTTGCAGAAAGCTATTATTCCATTCCAATGAAGAAGTATGACATGGTGCCTGACCATAGCCTATTTGAGGCTTTGATTACATGCTTGGTTGCCATTACACCCAAAGACCATTACAAGAGATTAGAAGAAGGCAGCATTGTTCTGAAGAAATCAAAGACATTTAGCTTTTGCAAGGAAGGTGTGCTTGTCGAAGGCCAATCTTCGCCGATAAAGAGCGATATAGTGATCTTTGGAACTGGGTTCAGAGGGGATCAGAAGATCAAGGAGATGTTCACTTCTGAATACTTTCAGAGCATTGCAGTAGGCTCTGCATCTACAACTGTACCTCTCTACAGGTCAACTCAACAATTGTTTTTTGCGAGGAACAAATATTTAATTAGTACAATTTCCCAATTCTATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGCATCGGAATCCTTCACATCTGGTACAATGATCAGCTATGCCGGGACATGGGGTGCAATCCGAGGAGGAAGAACGGATTCTGGGCTGATTTATTCGACGTTTATGGCCCTAGTGATTATATTGATCTTTTCCCCAAGAAAGAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015544