Os07g0578600

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Revision as of 08:43, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0578600| Description = Similar to 5-formyltetrahydrofolate cycloligase (EC 6.3.3.2)| Version = NM_001066630.1 GI:115472992 GeneID:4343714| ...")
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Gene Name

Os07g0578600

Description

Similar to 5-formyltetrahydrofolate cycloligase (EC 6.3.3.2)

Version

NM_001066630.1 GI:115472992 GeneID:4343714

Length

3433 bp

Definition

Oryza sativa Japonica Group Os07g0578600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:24079176..24082608

Sequence Coding Region

24079177..24079435,24080025..24080162,24080228..24080386,24080505..24080546,24080622..24080667
,24081551..24081621,24082248..24082381

Expression

GEO Profiles:Os07g0578600

Genome Context

<gbrowseImage1> name=NC_008400:24079176..24082608 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:24079176..24082608 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgattaaaaatggcgcggcctcgctgatggtgcgcctcctccacctgccccgcgccgcatccgcccccacctacccccgccgccgccaccaccttgccctcctcccctcgctccggctacgagtgccggcgcccgccgccgccgccgccatgtcgagtgccgcggcggcgcaggaggtcgccgaccagaagcgcgcgctgcggtccgaggtgcggagggcgctcagggccctcacccccgagcagcgcgccagcgaagaccaggctattcaaaatgcaattttgaactcttcttggttcaaagaaagcaagcggttatgtgcttatataagctgtgcacaattgcgggaagttgatacatcaaaagtactgtcagaagttttatccccaaattctgaacatggacatgcaaaggatctttatgttcctcgagtggaagataagaatcgcaatatgcggatgctcaaaatcactaccatggatgatttagttaaaaattcaatgaacattctagaaccatcaccacttgatgctagtgggaatgctcgtgaagaagtgttgtcaacctcttcccctgttgatctttttctattgcctggacaagcttttgataggactggacgaagattaggacgtggtggagggtactatgacacattcttgatgagatatcaagaacttgctaaagagaaagggtgggatcagcctcttctagtcgcgctttcatactcggtgcaaattttggaggaaggcatcatcccagtcaactcaacagatgttcctattgatgctctggtctcatcctctggcatcattccaatcagtcctgcagcattggcgaggatataa</cdnaseq>

Protein Sequence

<aaseq>MIKNGAASLMVRLLHLPRAASAPTYPRRRHHLALLPSLRLRVPA PAAAAAMSSAAAAQEVADQKRALRSEVRRALRALTPEQRASEDQAIQNAILNSSWFKE SKRLCAYISCAQLREVDTSKVLSEVLSPNSEHGHAKDLYVPRVEDKNRNMRMLKITTM DDLVKNSMNILEPSPLDASGNAREEVLSTSSPVDLFLLPGQAFDRTGRRLGRGGGYYD TFLMRYQELAKEKGWDQPLLVALSYSVQILEEGIIPVNSTDVPIDALVSSSGIIPISP AALARI</aaseq>

Gene Sequence

<dnaseqindica>2..260#850..987#1053..1211#1330..1371#1447..1492#2376..2446#3073..3206#aatgattaaaaatggcgcggcctcgctgatggtgcgcctcctccacctgccccgcgccgcatccgcccccacctacccccgccgccgccaccaccttgccctcctcccctcgctccggctacgagtgccggcgcccgccgccgccgccgccatgtcgagtgccgcggcggcgcaggaggtcgccgaccagaagcgcgcgctgcggtccgaggtgcggagggcgctcagggccctcacccccgagcagcgcgccagcgaaggtgatcccccttctcgctcatatggcccaagcatctgattccgctgtccctgatgtaaatcgattgagccgttggccaccagctgctcgtcgatttgccgacaagggctgctgcttttactgtgctggctattagtattggcgctcacagaaaaggatgataaaatcatgtctgaataagcattaggcaagcaaaatttaacttggcgatacacttcaatctctcatcagtagctagcattagaaggatcacattagggacattccaacctgatggcaggcgtcgtttaacaattgaatcgaactgcctgtcatgagaaaatcacagaaggacaccaagacaaaagggttgctacctttgcttctgtagctggaccaactatatttggttgtgttgtttccacaccccccccccccccatcttctgtaactgcaacgaagtagatttttgttttgttaatttttctcttcaaagacctgaagtgtaatgcggacgtcagtgctacttatgcttctgttgctggaacacaacaggtgttgtttgtgttgatttgcgaagtttatggatgtgttttttcttatatttccagaccaggctattcaaaatgcaattttgaactcttcttggttcaaagaaagcaagcggttatgtgcttatataagctgtgcacaattgcgggaagttgatacatcaaaagtactgtcagaagttttatccccaaattctggtgagtactatatacagatatgcccccttgatttctcctgcttctaacaatttgatttgtttcagaacatggacatgcaaaggatctttatgttcctcgagtggaagataagaatcgcaatatgcggatgctcaaaatcactaccatggatgatttagttaaaaattcaatgaacattctagaaccatcaccacttgatgctagtgggaatgctcgtgaagaaggtatgaagtttatctaggtgatacaatgaaacttttcctcggttgattaagttagtgcatcactgggtagctaatatgatttatatgcattacactgatcctcttttaatgcttacagtgttgtcaacctcttcccctgttgatctttttctattgcctggtaagcccttcaatctcttaatacactgcatccatcactgaacattcaattgaataatgattgttattcatgtaggacaagcttttgataggactggacgaagattaggacgtggtggagggtaggtctacacattattctatctttcactttaataactgcctgtattgaagttgccaaatactgttagtgtcatcttcatccaatatctatgcagtggttcaattgctaactttgggtcctattcaacaacttattcatgtcatgattttgctaactctgaatatttggcatgcaagcattccaaaatgaagtccaaggatgctctagtgtattagcagacccaagtaatagagaaaagttacctaccacagtggaaattaaacatactttatagatgcagaaacttgttgtagggtgatccacatggatgaaagttcttggtctagcagcacaaatcaaatacctgtcacaacatctgcagaacatctaagaaatgtaagagctggtagttgaatggttgcagtgtagcgtgtggatttagaaactaaactgtgtaaacataagtcgtggaatctgggttggcatcttgacaattagattcataacttactttctgtgctttattcgctgttagtttgaagaactcaggctattcgtgtgggtgcggcctttgctttcttttttagattttatagcctccacagctctatgatgtgcattttatttcctctgttagggagaaagtatatgatgtctctgcatattagttttgtgctttggctgtatctcatttgatttaacacaatctgcttaatggtccacaattcgtcaagtgcatctaaaatgcatataatggcaaggggcacatgaacttcaaatctttttaatgccatcctgtcaccaatagttcatttatgccagtttgacttagtattgtttagaccaaagcctgaaatttttccttcatctaaattatatatttgtatgtttgttcatcgaaggtactatgacacattcttgatgagatatcaagaacttgctaaagagaaagggtgggatcagcctcttctaggtatgatgtgcagatttccagaagttcagttgtttttgtttactttagactctttttgtttgttattacacatcgttgacatgttatgtcattttagttgattatagttacggaaagtttactattggtcccttaatgtcaaaaacaggaccaaagtgagctgttttgaagtagcaccaacaccatgaacagaggggccaacctgttggtagcctaatatgttctgttggttccttgatgtaacatgctattttgtattttctactacaatgattattttgtttggcccgcaatactgaaccaaatttcataatcagatcccaacaagctttcagattcttttatgaagggtatcagggattcttggtccaaccagaaactaaattgtggtgactagttccttaatcacgtagtgaattaacaagtcaactagaagttacattataatttaactgaaccaaagcttgtaattgcatttcatttacttctacatgcccatgaaatacgtatacctagtgggcacacttttgtgcgttgcagttcatagttacatttaaatgatgaaatccgatctagcactattattgctaaatgatagactaatggcctgattttctattttgaagtcgcgctttcatactcggtgcaaattttggaggaaggcatcatcccagtcaactcaacagatgttcctattgatgctctggtctcatcctctggcatcattccaatcagtcctgcagcattggcgaggatataattgagctgattggtttctgctttgcgttgacagtcaacctctcttccctgaacaacacttttttagataatgcttcaccaaagctgagaaatttttcgatcaagtgattttgttacgcaatgtatctgtattctgaatatgaattgattttgtctgcgtattgtaatgacaactttgatcaaacatacaataagttcaatatatattcatagaggactatggacctg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0578600, RefSeq:Os07g0578600