BGIOSGA015698

From RiceWiki
Revision as of 16:03, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA015698

Description

BGIOSGA015698

Definition

Oryza sativa Indica Group BGIOSGA015698, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA015698-TA

Ensembl Protein ID

BGIOSGA015698-PA

Length

3004

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:966099..969102

Sequence Coding Region

968413..969102,967398..968044),complement(966099..967224

Genome Context

<gbrowseImage1> name=IndicaChromosome04:966099..969102 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:966099..969102 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGGGCACTACTTCCTCAGCTACGGGGCGAGTATTTGGAAGAGATGTAGATCGTACAAAGATAGTAAATATGTTGCGCGAAGCAGCAGGGGACGGTGAACCAGGCTCCAGCAACTACCCGTGTTATTCAACAACAATTGGCATCTATGGCATTGCTGGATCCGGGAAGACAATCCTTGCACAATATGTCTGTGAGTATGAAAAAGAGGATGGCCATTTTTCACCTGTCATGTGGGTTGATGTTTCTCAAAGTTTCAGTGTGGATAAAATTTACAGACAGATGCTCGAAGGAGCCATTGGGCGACCATCCTATAAGTACCAAAATCTTGATGCCCTAGAAAATAAGCTAAAAGCGGAATTGGGAGACAAAAGGTTCTTGCTGGCGCTGGATGGTCTCCAGTCGGATGTTGCTCAGCAAGAACGGGACCAAGTACGTAATACACTGAATTTTGGGAAGCGGGGAAGTAAGATCCTAGTTACAGCTTTGTCCAAAGATGCAGCCATGTCCCTAGGTGCCAAGAGCCCCGTTGAAATTTCTGAGATGGATGATAATGATTTCCTTGATCTATTCATGCATTATGCACTTGATGGTGTGAGAGTACTTGATAGCCAAAAACTTCAAAAACTACATTCGATTGGCAGAGGGATCGCAAATAAGCTAAGAAGATTACCGGTTGCAGCAAGGCGAAGATGGTTGCCGGAAATGATTGCTTACGAGTTCCTGTTTATTACTTCCAGCAATGCAATGAAGTATAAACATGATATCTACAAAATGAAGAAACTCCGGACATTAATCATTAGCGCTGATGGATCGAGGGGGATAACAGAACAAGTTCTTGAGCGAATGCTGAAAGAATTGAAGAAGTTACGTGTGGTGCAAACATATCTGGATCAAGATAGAGTGATTGTCCCGGAGTCAGCCTGTGGCTTAAAGCATTTACGTTTTCTCAGCATTTTGGGATCCCATATAAGACAGGTGAAGTTGCCAACAGAATTTGGCAAACTCTACCATTTGCAGACCCTAGAGTTCCCTCTTTCATATTATTTAGATTTAAACTGTTCCAATGTCAAAAGGATGAGCAGCCAGCTGATTAACTTGCGGTCTATTTCATCTCCTTATGTTGATTTGGGAATTCCTTACGTGGAGGATTTAAAGCAACTGCAAGAGCTAAGTCACTTCAAGGTAAGGAAGGAGGAAGCGTATCGGTTAAAGCAGCTGATGAAGCAAAATAACCTTCGTGGCAGCTTGAAAATCAGGGCTTGTTTGGTTCTTTACCCTACCAATTCATTGGTAGTGCCAAAGTCTAGGAAAATTTTGGCACTACCAAAATATTGGGTATGTTTTTGGCATCAAACCAAAACGGCCCTCAGTGGCCTTGAGAGTGTTGAGAGCAAGGAGAAAGCTCTAGAAGCCAATCTGACAGAGAAGAAGTGCCTCACAACATTGTCACTTGAATGGCATGCTTATCACGCATCCTATGTCAAAGCTGACAAGGATCTACAGCTCCAAGTGGAGATACTCGACGGCCTCCAACCACCAGAGCAACTTACATGCCTCAACATCTGCCACTACCTGGGTCGCACAACACCAAGTTGGCTGTCAAGGGAACATGGGGGCGTCAGTAACCTGCAATTCCTCGAACTCAGGGAGTGTTACAACCTGGAAACTCTCCCTGAGATCGCCAAGCTCTTCACTGACCTTCGCAAGCTTAGGCTCAATGTTCTTCCCNATCTGACAAGGCTCCCAAGACTTCCAGGCATGCTGAAGAGCCTGGAAATCAGCGGCTGCAGGCGTTTGGAGGTGACATCCATGGATGACCAAAGGTTGTTTCCTGCATCCCTAGAATGTCTCCACTTGACAGGATGCACTGTCGAAGACACTGTCCTGCGCGATTCATTGAGAGGATGCACTGTCCTGGGTAGCCTGAAACTAAGTCAAATTGACTCTTTCACAGAGATACCTTCTGAGACAATGAGGTCTCTAGTGAGGCTTAGGGATCTCTACATCGGTGGCTGTAAGCAATTAGTTCGCTTGGAAGGCCTGAACCATCTTGATAGCCTGGAGCACCTTACCATCATCAAGTGTCTCAGCCTTATGGACTTGAAAGTAGCCGGCAAAGCACACGCAGTTCCTCGGCTAACCGTCGATGACATGTCCCTTGTACCCAAGCTTTTGTCAAGAGGGGCATATCCATCACTGAAATGGCTTGCGCTCGAACACTCGGTGGAACTGAGGGGAGAGTGGATCCTAGAGCACTTGACTTCACTAGCTTACCTTGGGTTTACTTCCTGCCATTGGAACAGCTTCCCAACAACTTGGAGAACCTCACCGCACTTAAGGAGTTATATTTTGATTTCTGTGGAAGTATCCGGTCCCTTCCAAAACTACCTAAATCTCTGCTGTACTTCCGATCCATTGGCTGCAAATTCCTTTTCTTGGGATCAAATTGGGACGATATAG</cdnaseq>

Protein Sequence

<aaseq>MSGTTSSATGRVFGRDVDRTKIVNMLREAAGDGEPGSSNYPCYSTTIGIYGIAGSGKTILAQYVCEYEKEDGHFSPVMWVDVSQSFSVDKIYRQMLEGAIGRPSYKYQNLDALENKLKAELGDKRFLLALDGLQSDVAQQERDQVRNTLNFGKRGSKILVTALSKDAAMSLGAKSPVEISEMDDNDFLDLFMHYALDGVRVLDSQKLQKLHSIGRGIANKLRRLPVAARRRWLPEMIAYEFLFITSSNAMKYKHDIYKMKKLRTLIISADGSRGITEQVLERMLKELKKLRVVQTYLDQDRVIVPESACGLKHLRFLSILGSHIRQVKLPTEFGKLYHLQTLEFPLSYYLDLNCSNVKRMSSQLINLRSISSPYVDLGIPYVEDLKQLQELSHFKVRKEEAYRLKQLMKQNNLRGSLKIRACLVLYPTNSLVVPKSRKILALPKYWVCFWHQTKTALSGLESVESKEKALEANLTEKKCLTTLSLEWHAYHASYVKADKDLQLQVEILDGLQPPEQLTCLNICHYLGRTTPSWLSREHGGVSNLQFLELRECYNLETLPEIAKLFTDLRKLRLNVLPXLTRLPRLPGMLKSLEISGCRRLEVTSMDDQRLFPASLECLHLTGCTVEDTVLRDSLRGCTVLGSLKLSQIDSFTEIPSETMRSLVRLRDLYIGGCKQLVRLEGLNHLDSLEHLTIIKCLSLMDLKVAGKAHAVPRLTVDDMSLVPKLLSRGAYPSLKWLALEHSVELRGEWILEHLTSLAYLGFTSCHWNSFPTTWRTSPHLRSYILISVEVSGPFQNYLNLCCTSDPLAANSFSWDQIGTI</aaseq>

Gene Sequence

<dnaseqindica>1..690#1059..1705#1879..3004#ATGTCGGGCACTACTTCCTCAGCTACGGGGCGAGTATTTGGAAGAGATGTAGATCGTACAAAGATAGTAAATATGTTGCGCGAAGCAGCAGGGGACGGTGAACCAGGCTCCAGCAACTACCCGTGTTATTCAACAACAATTGGCATCTATGGCATTGCTGGATCCGGGAAGACAATCCTTGCACAATATGTCTGTGAGTATGAAAAAGAGGATGGCCATTTTTCACCTGTCATGTGGGTTGATGTTTCTCAAAGTTTCAGTGTGGATAAAATTTACAGACAGATGCTCGAAGGAGCCATTGGGCGACCATCCTATAAGTACCAAAATCTTGATGCCCTAGAAAATAAGCTAAAAGCGGAATTGGGAGACAAAAGGTTCTTGCTGGCGCTGGATGGTCTCCAGTCGGATGTTGCTCAGCAAGAACGGGACCAAGTACGTAATACACTGAATTTTGGGAAGCGGGGAAGTAAGATCCTAGTTACAGCTTTGTCCAAAGATGCAGCCATGTCCCTAGGTGCCAAGAGCCCCGTTGAAATTTCTGAGATGGATGATAATGATTTCCTTGATCTATTCATGCATTATGCACTTGATGGTGTGAGAGTACTTGATAGCCAAAAACTTCAAAAACTACATTCGATTGGCAGAGGGATCGCAAATAAGCTAAGAAGATTACCGGTTGCAGCAAGGCGAGTGGGAGACAGGCTATGCAAAAAATTAGATGCCAGCTCTTGGCAAAAAAATTAGAGATAATGAAGTACCGTGTACTGACATCATACAAGAACAGTGGCGGAGCTACCAGAAACTTAACGAACAGGTCCGGCGATGCTTTGCTTACTGTAGTATGTTTCCACGGAACTACCGGTTCAAACGCAATGCATTGGTTAAGCTGTGGATGGCTGAAGGGTTTATCAAGACTAGCGATGGACAGAAAATGGAAGATATAGGTGAAAAATACTTTGAAGACCTAAAGTCATGGTCATTTATAAAATCAGAAGGAAAGCTTGCTGACAGTGACGATGAGTGGTTTACTATACCTGATATGCTGCACGAATTGGCAGAGATGGTTGCCGGAAATGATTGCTTACGAGTTCCTGTTTATTACTTCCAGCAATGCAATGAAGTATAAACATGATATCTACAAAATGAAGAAACTCCGGACATTAATCATTAGCGCTGATGGATCGAGGGGGATAACAGAACAAGTTCTTGAGCGAATGCTGAAAGAATTGAAGAAGTTACGTGTGGTGCAAACATATCTGGATCAAGATAGAGTGATTGTCCCGGAGTCAGCCTGTGGCTTAAAGCATTTACGTTTTCTCAGCATTTTGGGATCCCATATAAGACAGGTGAAGTTGCCAACAGAATTTGGCAAACTCTACCATTTGCAGACCCTAGAGTTCCCTCTTTCATATTATTTAGATTTAAACTGTTCCAATGTCAAAAGGATGAGCAGCCAGCTGATTAACTTGCGGTCTATTTCATCTCCTTATGTTGATTTGGGAATTCCTTACGTGGAGGATTTAAAGCAACTGCAAGAGCTAAGTCACTTCAAGGTAAGGAAGGAGGAAGCGTATCGGTTAAAGCAGCTGATGAAGCAAAATAACCTTCGTGGCAGCTTGAAAATCAGGGCTTGTTTGGTTCTTTACCCTACCAATTCATTGGTAGTGCCAAAGTCTAGGAAAATTTTGGCACTACCAAAATATTGGTAGGGTAAAATTATTTAGCTAACATTTGGATTGCTACCAATTTAAAGCCAAATTCTTATAGCATAGTGAAGAAACTTCTAGAATATGACCAAATATTTTAGGGACACTACCAAATATTTAGTCTCAATCCAAACTAACACACAAACTATTCAATTTGCCAATAAATTGGTAGGGTATGTTTTTGGCATCAAACCAAAACGGCCCTCAGTGGCCTTGAGAGTGTTGAGAGCAAGGAGAAAGCTCTAGAAGCCAATCTGACAGAGAAGAAGTGCCTCACAACATTGTCACTTGAATGGCATGCTTATCACGCATCCTATGTCAAAGCTGACAAGGATCTACAGCTCCAAGTGGAGATACTCGACGGCCTCCAACCACCAGAGCAACTTACATGCCTCAACATCTGCCACTACCTGGGTCGCACAACACCAAGTTGGCTGTCAAGGGAACATGGGGGCGTCAGTAACCTGCAATTCCTCGAACTCAGGGAGTGTTACAACCTGGAAACTCTCCCTGAGATCGCCAAGCTCTTCACTGACCTTCGCAAGCTTAGGCTCAATGTTCTTCCCNATCTGACAAGGCTCCCAAGACTTCCAGGCATGCTGAAGAGCCTGGAAATCAGCGGCTGCAGGCGTTTGGAGGTGACATCCATGGATGACCAAAGGTTGTTTCCTGCATCCCTAGAATGTCTCCACTTGACAGGATGCACTGTCGAAGACACTGTCCTGCGCGATTCATTGAGAGGATGCACTGTCCTGGGTAGCCTGAAACTAAGTCAAATTGACTCTTTCACAGAGATACCTTCTGAGACAATGAGGTCTCTAGTGAGGCTTAGGGATCTCTACATCGGTGGCTGTAAGCAATTAGTTCGCTTGGAAGGCCTGAACCATCTTGATAGCCTGGAGCACCTTACCATCATCAAGTGTCTCAGCCTTATGGACTTGAAAGTAGCCGGCAAAGCACACGCAGTTCCTCGGCTAACCGTCGATGACATGTCCCTTGTACCCAAGCTTTTGTCAAGAGGGGCATATCCATCACTGAAATGGCTTGCGCTCGAACACTCGGTGGAACTGAGGGGAGAGTGGATCCTAGAGCACTTGACTTCACTAGCTTACCTTGGGTTTACTTCCTGCCATTGGAACAGCTTCCCAACAACTTGGAGAACCTCACCGCACTTAAGGAGTTATATTTTGATTTCTGTGGAAGTATCCGGTCCCTTCCAAAACTACCTAAATCTCTGCTGTACTTCCGATCCATTGGCTGCAAATTCCTTTTCTTGGGATCAAATTGGGACGATATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015698