Os07g0581000

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Revision as of 08:43, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0581000| Description = Protein of unknown function DUF250 domain containing protein| Version = NM_001066638.1 GI:115473008 GeneID:4343722| ...")
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Gene Name

Os07g0581000

Description

Protein of unknown function DUF250 domain containing protein

Version

NM_001066638.1 GI:115473008 GeneID:4343722

Length

3641 bp

Definition

Oryza sativa Japonica Group Os07g0581000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:24172084..24175724

Sequence Coding Region

24172361..24172720,24173189..24173350,24174565..24174765,24174867..24175051,24175200..24175329

Expression

GEO Profiles:Os07g0581000

Genome Context

<gbrowseImage1> name=NC_008400:24172084..24175724 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:24172084..24175724 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggcggagaagaagccgccggcggtgtccgacgtcggggcgtgggcgatgaacgtcgtcagctccgtcggcatcatcatggcaaacaagcagctcatgtcctcctccggctacgccttctccttcgccacgacgctgaccggattccacttcacggtcacggcgctcgtcggatggatctccaacgccaccggctactccgtatccaagcacgtcccgctctgggagctcgtctggttctccctcgtcgccaacacgtccatcaccgggatgaaccttagtctcatgctcaactccgtcggtttctatcagatctcgaaattgagcatgatcccggtggtttgcttgatggaatgggtgctcaacagcaagcactacaccaccaaggttatatcggccgtggtcgtcgtggcggcgggtgttgggatttgcacggtcacggatgtggaggtcaatgccaagggattcatctgcgcttgcgtggctgtcttctgcacgtcgcttcaacagattacaattggctcctttcagaagaagtacaacatagggtcatttgaacttctcagcaaaactgcaccaatacaggctgtgtctcttattatacttggtccctttgctgactattacctcaatgggcgatggttattaaactacaacttctcaactggggcaactttcttcatattgctttcttgctccttggctgtcttctgcaacatgagccagtacctctgcatcggccggttctctgcaacttcgttccaggtcctgggccacatgaagaccgtgtgcgtgctgattcttggctggatcctgttcgactcggccctcaccgtgaagaacatcctcgggatgctgctcgccgtgatgggcatggtggtctacagctgggccgtggagaccgagaagaaggcctccgccccaatcccccggaacaagagcgacatgctggacgactccgaggacgttcccctcaaggccagggtgagcggcctcccctcgtccgacctcgaggaaggcgagatgaagagctag</cdnaseq>

Protein Sequence

<aaseq>MEAEKKPPAVSDVGAWAMNVVSSVGIIMANKQLMSSSGYAFSFA TTLTGFHFTVTALVGWISNATGYSVSKHVPLWELVWFSLVANTSITGMNLSLMLNSVG FYQISKLSMIPVVCLMEWVLNSKHYTTKVISAVVVVAAGVGICTVTDVEVNAKGFICA CVAVFCTSLQQITIGSFQKKYNIGSFELLSKTAPIQAVSLIILGPFADYYLNGRWLLN YNFSTGATFFILLSCSLAVFCNMSQYLCIGRFSATSFQVLGHMKTVCVLILGWILFDS ALTVKNILGMLLAVMGMVVYSWAVETEKKASAPIPRNKSDMLDDSEDVPLKARVSGLP SSDLEEGEMKS</aaseq>

Gene Sequence

<dnaseqindica>3005..3364#2375..2536#960..1160#674..858#396..525#gcgtcgtctttctcctctaatctctccttctcttaacccgcctcccctcccgttctccccgcagatcgcagttttttcaccgtcctccgcccgtgcagttgacgcttccgcctcccacactgcgtctgcgtgcgcacacagcaccaattcgaaacccctccccgcactccctccccctcccttccttgccttgcctaggcggcaacgcctcccgtcctttataaccctgcggctcctcccgcgtgaggcaccgaggcccgggtggtagaccgcgggacccgagccgagccgtgccctgccctgcccttcctccgcccagggtcgcagccaggtcgtcgtcgtcgtcggagggggaagagagccgcggcggcgtcaggaggaggaggaggggcgagatggaggcggagaagaagccgccggcggtgtccgacgtcggggcgtgggcgatgaacgtcgtcagctccgtcggcatcatcatggcaaacaagcagctcatgtcctcctccggctacgccttctccttcggtacccttcgcgccttcgcgcgctcctcctcctcccctttcccctctccgcagatctggatccgcaggttcgggtttgttcctggtgacgccgccgcgggatctgattttttcttctttttttcgtttcctcctttggtcgaatgcagccacgacgctgaccggattccacttcacggtcacggcgctcgtcggatggatctccaacgccaccggctactccgtatccaagcacgtcccgctctgggagctcgtctggttctccctcgtcgccaacacgtccatcaccgggatgaaccttagtctcatgctcaactccgtcggtttctatcaggtattgtatatttactaggttgcccatttgcctggaatgtttgtatatgccgtcttgtgctcttgtgtggctgaaggtgcgaaacctctgcaaacctgtagatctcgaaattgagcatgatcccggtggtttgcttgatggaatgggtgctcaacagcaagcactacaccaccaaggttatatcggccgtggtcgtcgtggcggcgggtgttgggatttgcacggtcacggatgtggaggtcaatgccaagggattcatctgcgcttgcgtggctgtcttctgcacgtcgcttcaacagattgtgagtttttctccccccttaatcctgatactggacctgtgctgttatgcatttcaaattcccctttaggatgttaaaaatactagttatggatactgcaattgccaactactcaagcgtttttttgttaacactataggcttgatactcttttgaaactgaatcatgttgctgaggatgaaaaaaatcagtttttttttattgaacaatggtgtagcaatgtttttgtggtggcacttgtttttcaatcttctgttaatttacttaggacattctgttgtaacactattctgaattgcgatagcattcaaactaaagtgtggatgctagaaccttgccattgagtcctcagaatacagaaaactcagaaacagccaatctaaactgtagaatagtaatgctggccatagaattgtacatggaatgtttattttcgcatcataagctgtagatttgcaattctcacgagtcgtgatagactatttttatgtaccccttcagccttgatactttacattgtggaatttacatgctagctgtgaatcactttgaagatttacgaccaagctgaagcaacttttggactatttaccagtttctaaaacttggatcaggctgtggtccaactagggcaaccggggacggctccttttaggatactactagagatattttttgggggtgaaatggactataaattattttattagattgtccagctcaggatttgacttagaatacgacctgcaagctgcaatatccatcatgggaacatgtcaataggcaaaaaccaagctgggccatcacccctctattgctaggatgggactatgggaactaaagcctatataagtgttgaacaggatcatataactatgagttgagattggattcaacataactcaagtgataataactactatattattgaaccgtagacagacagtttgaagtggcagtcggacctgtgaactggactgcaagtggttcaccggccagcttttaaaaactatgcctatgatgtttatattcctgtaatcttattgcattggacagtgataaatatttatggctcttcgtacggtaataattttgatacataagttggtttttgaaatttgtggaagatgattacttaaatctgaatgctgatggatccttctttgtaaattatatgctgagttctgacaatgcgttacttgtccttgtcccagacaattggctcctttcagaagaagtacaacatagggtcatttgaacttctcagcaaaactgcaccaatacaggctgtgtctcttattatacttggtccctttgctgactattacctcaatgggcgatggttattaaactacaacttctcaactggggcaactgtaagttctctcgcatgtgcatgtcacaattttctattcatgacagcactctttccaaatgaatgatacctttgccatgttattgtatcttctactctagatttgtgctagtactattgagtattttattggaatgtttcatcaatgatttctcccattcttcatgttgagtggacatccccgcatcagtacaccactagtaaattgtcaactttgtttcccattgaaatattatttgttttgcctaatgttcatcccaagaaaattgttgaacgattagtttctattctatgactacagcacggtgaaactggaatttactgctaaccaaacagaacagttcctatcatgcagttttcgtgctgtggtctgttttaatcattatgcacttctccttgttgctttaatactcctactgggaattcttaaaacatgttctaacaacttgctatgttaataactctgcagttcttcatattgctttcttgctccttggctgtcttctgcaacatgagccagtacctctgcatcggccggttctctgcaacttcgttccaggtcctgggccacatgaagaccgtgtgcgtgctgattcttggctggatcctgttcgactcggccctcaccgtgaagaacatcctcgggatgctgctcgccgtgatgggcatggtggtctacagctgggccgtggagaccgagaagaaggcctccgccccaatcccccggaacaagagcgacatgctggacgactccgaggacgttcccctcaaggccagggtgagcggcctcccctcgtccgacctcgaggaaggcgagatgaagagctagctaatgacatattatttattcattcttcttgttcctttcttttttgtacgtgttcaaatccatatattgcccccattctgggggaagttcttgaagctatcggcacttgtgttaattttgcctcctcccttgttcctggggttcatagatgatgatgatgctgatgaaccccagccggtctcgacgtagatgaccattttagaagccatgttcttgatggcgtgttgttattatagatgacaagacttataatggaatacaggtgtttatccgttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0581000, RefSeq:Os07g0581000