Os07g0583700

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Revision as of 08:44, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0583700| Description = WRKY transcription factor 78| Version = NM_001066651.1 GI:115473034 GeneID:4343736| Length = 5473 bp| Definition = ...")
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Gene Name

Os07g0583700

Description

WRKY transcription factor 78

Version

NM_001066651.1 GI:115473034 GeneID:4343736

Length

5473 bp

Definition

Oryza sativa Japonica Group Os07g0583700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:24314295..24319767

Sequence Coding Region

24314720..24315287,24315684..24315842,24315929..24316094,24316696..24317239,24318243..24318416
,24319477..24319722

Expression

GEO Profiles:Os07g0583700

Genome Context

<gbrowseImage1> name=NC_008400:24314295..24319767 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:24314295..24319767 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgattcgccaaaccctagctccggtgaccaccccgcgggcgtcggcgggtcgccggagaagcagcccccggtggatcggcgcgtcgcggcgctcgccgcgggcgcggcgggcgcgggggcgaggtacaaggcgatgtcccccgcgcggctgccgatctcgcgggagccctgcctcaccatccccgcgggcttcagcccctcggctctcctcgagtcccccgtcctcctcaccaacttcaaggttgaaccctctccgacaactggtactctgagcatggctgcaattatgaacaagagtgcaaatccagacatacttccttcgcctagggataaaacatctggtagcacccatgaagatggtggctctcgagattttgaattcaagcctcatctgaattcatcctctcaatcgacggcttctgctatcaatgatcccaaaaagcatgaaacttctatgaaaaatgaaagcctgaatactgccctgtcatctgacgatatgatgatcgacaatatacctctatgttctcgtgagtcaactctcgcagtcaatatttcaagtgccccgagccaactggttggaatggttggtttaactgacagctcacctgctgaagttggtacatctgagttgcatcagatgaatagctctggaaatgctatgcaggagtcacagcctgaaagtgtggctgaaaagtctgcagaggatggttataactggcgcaaatatgggcaaaagcatgttaagggaagtgagaacccgagaagctattacaagtgcacacatcctaactgtgatgtaaaaaagctattggagcgttcgcttgatggtcagattactgaagtggtttataaagggcgtcacaatcaccctaagccccaacccaataggaggctgtctgccggtgcagttcctccaatccagggtgaagaaagatatgatggtgtggcaactactgatgacaaatcttcaaatgttcttagcattcttggtaatgcagtacatacagctggtatgattgagcctgttccaggctcagctagtgatgatgacaatgatgccggaggagggagaccttaccctggagatgatgctgttgaggatgatgatttagagtcaaaacgaaggaaaatggaatctgctgctattgatgctgctttgatgggcaagcctaaccgtgagcctcgtgttgtagtacaaacggttagtgaggttgacatcttggatgatgggtaccgctggcgcaagtatggccagaaagtagttaaaggaaaccccaatccacggagttactacaagtgcacaaatacaggatgcccagtcaggaagcatgttgagagagcatcacatgatccaaaatcagtcataacaacatatgaaggaaaacataaccatgaagtccctgcgtcgaggaatgcgagccatgagatgtccactccccccatgaagcctgttgtccatccaattaacagcaatatgcagggccttggtggcatgatgagagcatgtgaacctaggacatttccaaaccaatattctcaagcagctgaaagtgacaccatcagccttgatcttggtgttggaatcagcccgaaccacagcgatgccacaaaccaattgcagtcctcagtttctgatcagatgcagtatcaaatgcagcccatgggttcagtatacagtaatatgggacttccagcaatggcaatgccgactatggctggcaatgcagctagcaatatatatggttcgagagaagaaaaacctagtgaaggttttactttcaaagccacaccgatggaccattcggctaacttatgctacagtaccgccggcaatttagtcatgggtccgtga</cdnaseq>

Protein Sequence

<aaseq>MADSPNPSSGDHPAGVGGSPEKQPPVDRRVAALAAGAAGAGARY KAMSPARLPISREPCLTIPAGFSPSALLESPVLLTNFKVEPSPTTGTLSMAAIMNKSA NPDILPSPRDKTSGSTHEDGGSRDFEFKPHLNSSSQSTASAINDPKKHETSMKNESLN TALSSDDMMIDNIPLCSRESTLAVNISSAPSQLVGMVGLTDSSPAEVGTSELHQMNSS GNAMQESQPESVAEKSAEDGYNWRKYGQKHVKGSENPRSYYKCTHPNCDVKKLLERSL DGQITEVVYKGRHNHPKPQPNRRLSAGAVPPIQGEERYDGVATTDDKSSNVLSILGNA VHTAGMIEPVPGSASDDDNDAGGGRPYPGDDAVEDDDLESKRRKMESAAIDAALMGKP NREPRVVVQTVSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNTGCPVRKHVERAS HDPKSVITTYEGKHNHEVPASRNASHEMSTPPMKPVVHPINSNMQGLGGMMRACEPRT FPNQYSQAAESDTISLDLGVGISPNHSDATNQLQSSVSDQMQYQMQPMGSVYSNMGLP AMAMPTMAGNAASNIYGSREEKPSEGFTFKATPMDHSANLCYSTAGNLVMGP</aaseq>

Gene Sequence

<dnaseqindica>4481..5048#3926..4084#3674..3839#2529..3072#1352..1525#46..291#actctcacgagacagcttcccacgcagcgcagcgcaaccgcagcaatggccgattcgccaaaccctagctccggtgaccaccccgcgggcgtcggcgggtcgccggagaagcagcccccggtggatcggcgcgtcgcggcgctcgccgcgggcgcggcgggcgcgggggcgaggtacaaggcgatgtcccccgcgcggctgccgatctcgcgggagccctgcctcaccatccccgcgggcttcagcccctcggctctcctcgagtcccccgtcctcctcaccaacttcaaggtgagctgtgtacctcggccgcgcgtgtagcgtagctatcacccacccatctcctcgcgcctagttactgcgggatctacgaatttcttcggcgcccgcatcgtgccgggggattaatctgtgtcgggggggaaaggagggattccgatgcgcgcattagctttatgcttctagtttatgagacatttgcaccgcggaattggctcgtggcgtcggaataatgcgcttttgctgcgcgctttcgcatttctggtggtgccttgcggtttctggaactgacttttggcggggttcgcgcggatatagttgtttttgctctgtttctccttttggggcgcccctgcgccgtcaattttctgtggagtgaggtgggagctgttgtttgtgcgtttcgggggaattattctgtgctgcacacacttggtggctcgggggaacaaatcatcatgtggcatttttcttgttgcggcctcaaagggccttacataaggaaacgcccccttggctttggctgctattgtgctggtggtgtgcatgctaaggaatgctgctgtttcgtaagggaagcaccaagcactgcaagagagttagtttataggcttggtttagaaatgattgcttcactgatatcgagtgctgggtctggccttaggtgttgtattggcggttctgattcttctcggtgaaaacccacaaattggaatttacttgctgagcatagagtgcttgtttgcagcttcatatcacttgctttctcttggttccttcgttactttgccgaccttcttgatgtttccttttccaaaacatagggatgcttggcaaacaggttttaattaaatgaagaatttatgaaggtaacatttagttgacaagtgtttctggataatttttcatactagaggcataagtattgtactaagcatgacataaatactttctgcaagttactgttcaacatgtacactgtaatactgttgcgcattgttgaatgttcaaaaaattatagagattatgcttaccttgcttgcaaactaattatcaaaatttccctgtttaggttgaaccctctccgacaactggtactctgagcatggctgcaattatgaacaagagtgcaaatccagacatacttccttcgcctagggataaaacatctggtagcacccatgaagatggtggctctcgagattttgaattcaagcctcatctgaattcatcctctcaatcgacggtatggatcctttctttgagtgattacctggtatcgtgtaattcttcatttgtgtatactgtatttgagagtttgaaaaaatttccatagaaaataataacatttgttgtttacaaatggtcccgccaaaacagtggaatttatattggggatgtacataaaaggagtgtaaagttctaatgtgcttatgctaacttcctttccatgatctaaagttgttaccttacggtatgctatttattggatctatattgcattttacttggtaaatctatctgaggttccagcttttgatatttaagttttcctatgtttaattcaaaatattctcacgtgaatcgcaaacctcaccaggagtacaataaattcgttttattattattgtaggctgtgttatttctagtccatggttcggtgtcttgaaatttcagtgccaaaattgggatggatctggttacatcttcaagtctaataaatgatcacaccgactttattgtgtgatttgattatagcagggtcttgcaacataaatacaagctattaattgtgaaaggagaaatgagatctttggtgagatcatgagaatagggtataacagacacaatatttccttgctaggtgagacttgagtggtgctagtctggctgcaaatttatagaagtatgtgaaaatttgaggtcagaatacaagtaattgaatggaccaatctaatgagttctgtagctttagaataattaatgttaacataaaaatatgttcatgaaatcaggtccttctgcattttgttgttaaccgaattccacattcttctttagttctcacaagtacagacaagtatcttgtaatggtggattcttttttggaaaacaaacttcattacatattttgtgtgatccatctatgccttgtgcccttgttacctttttttccctacaccttgttttctcttgtacttagttttgcattgtataaccttttgctgtactcgtgtcttgtactgtaggcttctgctatcaatgatcccaaaaagcatgaaacttctatgaaaaatgaaagcctgaatactgccctgtcatctgacgatatgatgatcgacaatatacctctatgttctcgtgagtcaactctcgcagtcaatatttcaagtgccccgagccaactggttggaatggttggtttaactgacagctcacctgctgaagttggtacatctgagttgcatcagatgaatagctctggaaatgctatgcaggagtcacagcctgaaagtgtggctgaaaagtctgcagaggatggttataactggcgcaaatatgggcaaaagcatgttaagggaagtgagaacccgagaagctattacaagtgcacacatcctaactgtgatgtaaaaaagctattggagcgttcgcttgatggtcagattactgaagtggtttataaagggcgtcacaatcaccctaagccccaacccaataggaggctgtctgccggtgcagttcctccaatccagggtgaagaaagatatgatggtgtggcaactactgatggtgagggttttatcctttgttttaaaaactgatgctggatccctctggtttggcagcttgacctcctgcttcttggatctgattcccccccttttttttgtgaattctcttgctatttatgtcatctctgaacttcttattgcttctcaagaatttcttgcagaattatgattcatattcctttagattcttaaaaaaatgaatgatttgacatataaaacagcgaatgaacgtatagcgtggtggtagagcctccaatagtggggacgccgagtcaccgacctaagctcgaacccaggttttgcaccaaaaaactcccctgcatgaggttgagtgcagcctggctgtgcactgcgtttgggtggttttttttctcaacttagttgaattccacgggccattttaacctgccaatcatttttttttgtaacatacaaaacaaaatttgataagagttttctgagctgtatttgcactccagtacatcactgctggtatatttttgccagtccatacaccgaaggaaaagtcgtgtgatatggatgaatgtttttgttgtgttcttttatgcgatttttaaatgttatgtttttatatgcagacaaatcttcaaatgttcttagcattcttggtaatgcagtacatacagctggtatgattgagcctgttccaggctcagctagtgatgatgacaatgatgccggaggagggagaccttaccctggagatgatgctgttgaggatgatgatttagagtcaaaacgaaggtgcagttcatttgaacttgttacacactagggcgagaatcacccatttatactactgaatgtgttgtttacaactgttcaaacaggaaaatggaatctgctgctattgatgctgctttgatgggcaagcctaaccgtgagcctcgtgttgtagtacaaacggttagtgaggttgacatcttggatgatgggtaccgctggcgcaagtatggccagaaagtagttaaaggaaaccccaatccacggttagttgttattttcttcatctattgctcctagtaaattctcctctttttttctctgacatgtcaacagatttttaacagtaacaacaaaatgttcaataatcttctggtcatgttattttaaatcagaaagataagatttttttgccttatacatatttgtaaaacatgtgtgtcggattgtccggtgatactgctggggagtaaggctgtaggggcttaatgctaagactgggatgccgggcatcacttaattggaaattaggccttctcttaaggctctaatggttcaatataatcagatattttccatcacttattgaataggtgtatgtgtccataacccatatatatacaggatgcaacttgtatattcattttatttcatgattgcaggagttactacaagtgcacaaatacaggatgcccagtcaggaagcatgttgagagagcatcacatgatccaaaatcagtcataacaacatatgaaggaaaacataaccatgaagtccctgcgtcgaggaatgcgagccatgagatgtccactccccccatgaagcctgttgtccatccaattaacagcaatatgcagggccttggtggcatgatgagagcatgtgaacctaggacatttccaaaccaatattctcaagcagctgaaagtgacaccatcagccttgatcttggtgttggaatcagcccgaaccacagcgatgccacaaaccaattgcagtcctcagtttctgatcagatgcagtatcaaatgcagcccatgggttcagtatacagtaatatgggacttccagcaatggcaatgccgactatggctggcaatgcagctagcaatatatatggttcgagagaagaaaaacctagtgaaggttttactttcaaagccacaccgatggaccattcggctaacttatgctacagtaccgccggcaatttagtcatgggtccgtgagagtctatactaatgcttatagctcgagaatcatatattaccaatgcttcgtattgacattctcttcagaaagatgctcctatcattgacacatcagttgaaccggaggcgagagctgtacctgtgggctgcagcaaaatacaccacatgggtcttctggagcggcaaaggccttgttgtatacttgtatgtggcactggccctatattcgttgtacagtgaacccgttaagattaattagatcatcagaatttggttttctttaactatcttcgccttcagtggaatgtggatagaacatggattatggttgatttggttttgtgagcttgtctaattctcttttgtgacaaagctttgtatctcactgcatatgtacaatgccgttggcagtaaagatatgcaaatgtgatacctgtaacacg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0583700, RefSeq:Os07g0583700