BGIOSGA015949

From RiceWiki
Revision as of 16:05, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA015949

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015949, complete gene.

LocusTag

OsI_14965

Ensembl Transcript ID

BGIOSGA015949-TA

Ensembl Protein ID

BGIOSGA015949-PA

Length

6104

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:5352207..5358310

Sequence Coding Region

5352207..5352242,5352775..5353187,5356414..5358310

Genome Context

<gbrowseImage1> name=IndicaChromosome04:5352207..5358310 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:5352207..5358310 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTATAACACTTGATGTCAAAGTTATATTAAAGTTCGTCCGCTCCGCCCACACCGCGCTCGCCGACGCGTTCCTGCCCTGCGACCCGCAGGACTGGGAGAGGAAGCACGATGTGGTCGCCGGCGTCGTCTCCCACCCGGTGGCGCGCCGTGTTGAGGAGCTCCGCGTCGCCGCCATCAAGTCCGCCGACGGGCCGTCGTCCGACAAGGAGGTCTCGGAGATGGAAGGGGAGTTCCACCTCTCCCTCAGTGGCAGCACCCAGCCGTCGGAGACGCTCCGCGTGCTCGACCTCACCGGGTGCGGCAGTTTCTCCCTCTCCGCTGGCATGGTGTTCCCGCGGCTGATGACGCTGCGGCTGCGGCTGCGGCTGCGGCTGTGCGTCGTGCAGGTCAAGGACCTGCAGGGCGTCGTCGACTCCGCGCCAGCGCTCACCACCGTGCACCTCGACGGGAGAAACGAAATGGGAATTGTTAGTGTGTTGATGGGCCTTGGGAATGAATGGGCGGTGCAAGCTCTGGTCCTTTTCAGCTTCACGCTGCAAGTCACCCTCCTCTCGCTTGCTTGGATCCGTCGGCACAGCATCGCCATCATGCCAAAGCTGGTCCTATGGGTGGCGTACCAGCTAGCCGACTCCACCGCGCTCTTCACCCTAGGCCACATGGCCATCAGCAGCAGGTCGAGGGAGGAGCAGCCGCTCATGGCGTTCTGGGCACCGTTCCTCATCCTACATCTCGGCGGTCAGGACAACATCACCGCCTACTCCTTCGAGGACAACCGGCTGTGGCTGCGCCACCTGCAGACCCTCGTCGTGCAGGTGATGGGTGCTTCGTATGTTCTCTACAAGTACATGCCCGGCAAGGAGACCCTGGTCATGGCGGCCGCCGTGCTCATCTTCGTGGTGGGCATTCTGAAGTATGGCGAGAGGATATGGGCCCTCCGGGAAGCCACCTTCGACAATATAGCCAGGTGTTTGGACCAGCAGGAGGATTATGCCAGCGCTCGCGAACGCGAAGGCGACGATCTTCTCCAGCATGTTCTACAAGGAAGGAGCTCTATGGACGAGGAGAACGTTCTGATTGGAGCACATGGCCTGCTCGACATTTGCCGAGGGCTGTTCATCGGGTCACGCGGTGGGAGGCGCGGCTACCTCAGGCATGTCCTGCTGTCCTTCCAAATGTATGGCCGTCTTGATAAGCTGATGGAGTTGGAGCTGTCCCTCATGTATGACATCCTCTACACCAAGGCCACCGTGATCCACACATGGATCGGGTGCTGCATCCGTGTCATCGCGCTTGCCGCCACGGTGACCGCCACGTTCCTCTTCCTGCTCAGCAGCAAACACGGGCACAGCAGGAAAGATCTCGCCGTGACATACGTCTTGTTGGCCGGGGCCTTGCTCCTGGAAATGATATCCATGGTGAGGGCAGTCTTTTCCACCTGGACGGTCGTCTTCTTGTACAAGCTGAAATGGTATTGGCTCTATGGCGAGGTTCTCTCCATCCGCCGTGTTTTCAGGGTGGCTACGCACAGGAGGTGGTCCGGCACAGTTGGCCAGCACAACTTCCTCTGGGCCAGCGCCAATGCCGTCGACGCCAGCGCCGCCGCGGAAGCGAAAGAGGAACCGCCGGCCAGCGAACCCACGGGTTACTACTGCTTGGACACAATGGACCGTTGCTGCTGTCACCGCACCAAGCTATCAGACTCTACTAAGGAGCAGATAATGAGGAAGATACTAGAGATGCACGAGAACAGACAGGAAATCGGGTCTCAACCTGGCGTGCGCGCGTTCAAAGCTCTCGGCCTGGACGGCAGCCTCGGCTGGAGGACCATCCAAGACATCGGCTTCGAGGATAGTATCATGGCGTGGCATCTCGCCAGTGACATCTGCCTCTTCAGTGACCGCAGCAACAAGCTGGATTTGCACGAGGGGGTGGCGGTTCTGTCCAACTACATGATGTTCCTCCTCGTGCACCGCCGGTACATGCTGCCAGGCCCCGTGCGTCGCACGCGGTACGAGCAGGTGCGCGACGATCTCAACAAGTTTATGCATCGAAAGGGCCGCGCTCGCTCGCCGCAGGACTTGTTCGTGTGGGCTCTTCGCAGGGGCCTCCATGATCATCTCAACTCCGACGATCCTCCGGCGCAGTACGACACCGGAGTAAGACTTGCCGCCGTGCTCTACCACCGGTTGGACAGGCTTGATATCATCTTTGGGGTGTGGGTGGAGATGCTGTCTTACGTTGCTTGCAACTGCAGCAGAGAGTCTCATGCCAGGCAGCTTAGCAGCGGTGGTGAACTCGTCACCATCGTCTGGCTTATGGCGAGGCTCGTCGACATGTCTTGA</cdnaseq>

Protein Sequence

<aaseq>MAITLDVKVILKFVRSAHTALADAFLPCDPQDWERKHDVVAGVVSHPVARRVEELRVAAIKSADGPSSDKEVSEMEGEFHLSLSGSTQPSETLRVLDLTGCGSFSLSAGMVFPRLMTLRLRLRLRLCVVQVKDLQGVVDSAPALTTVHLDGRNEMGIVSVLMGLGNEWAVQALVLFSFTLQVTLLSLAWIRRHSIAIMPKLVLWVAYQLADSTALFTLGHMAISSRSREEQPLMAFWAPFLILHLGGQDNITAYSFEDNRLWLRHLQTLVVQVMGASYVLYKYMPGKETLVMAAAVLIFVVGILKYGERIWALREATFDNIARCLDQQEDYASAREREGDDLLQHVLQGRSSMDEENVLIGAHGLLDICRGLFIGSRGGRRGYLRHVLLSFQMYGRLDKLMELELSLMYDILYTKATVIHTWIGCCIRVIALAATVTATFLFLLSSKHGHSRKDLAVTYVLLAGALLLEMISMVRAVFSTWTVVFLYKLKWYWLYGEVLSIRRVFRVATHRRWSGTVGQHNFLWASANAVDASAAAEAKEEPPASEPTGYYCLDTMDRCCCHRTKLSDSTKEQIMRKILEMHENRQEIGSQPGVRAFKALGLDGSLGWRTIQDIGFEDSIMAWHLASDICLFSDRSNKLDLHEGVAVLSNYMMFLLVHRRYMLPGPVRRTRYEQVRDDLNKFMHRKGRARSPQDLFVWALRRGLHDHLNSDDPPAQYDTGVRLAAVLYHRLDRLDIIFGVWVEMLSYVACNCSRESHARQLSSGGELVTIVWLMARLVDMS</aaseq>

Gene Sequence

<dnaseqindica>1..36#569..981#4208..6104#ATGGCTATAACACTTGATGTCAAAGTTATATTAAAGGTAGTTTTTAGCTATTTGTATAATCGTTCTCTGATGTGGAAAAACAATAATTTGTTTAATATTAATTCATAATCTGAAACATTGATCTTTTGGGTTAAAATTGTGGAGTGTGATACTCGCCCATCTCCAATGCTTTGTTTTTCACAACTACATGTCCAGATAGCTATATAGCAAATGCAATATATAGTACCTTTCTATTACATGTAAGTAGGCAAAATTTGCTACAGGACACCGAAAAATTGTGACCTTTGCTGTGAGACACCTGAAGATCGTGTATTTGCTCGTGGACACTGTAAAAAAGTGGTAATTAGCTGCTGGACACTCCTCCCATTATTTTATTATTTCCGATCAAAAAGGAGAGAGAAACTTTGGTTAAAGACAAGTTTGCCCATGGGTCTACTTGTCAATCTCTCTTTCTCTGTTCATCTTCTTCCTCTCTTTCTCTGTTCATGTCTTCCTCTCTCTGTCACGGCACACCTTGCCGTCCGGCCTCATCCGCCGGGGAGACGACTTCTTCTCCCTCCGCGACGAGTTCGTCCGCTCCGCCCACACCGCGCTCGCCGACGCGTTCCTGCCCTGCGACCCGCAGGACTGGGAGAGGAAGCACGATGTGGTCGCCGGCGTCGTCTCCCACCCGGTGGCGCGCCGTGTTGAGGAGCTCCGCGTCGCCGCCATCAAGTCCGCCGACGGGCCGTCGTCCGACAAGGAGGTCTCGGAGATGGAAGGGGAGTTCCACCTCTCCCTCAGTGGCAGCACCCAGCCGTCGGAGACGCTCCGCGTGCTCGACCTCACCGGGTGCGGCAGTTTCTCCCTCTCCGCTGGCATGGTGTTCCCGCGGCTGATGACGCTGCGGCTGCGGCTGCGGCTGCGGCTGTGCGTCGTGCAGGTCAAGGACCTGCAGGGCGTCGTCGACTCCGCGCCAGCGCTCACCACCGTGCACCTCGAGTCCGTCTTCCTCGCCGGGCCAAAAGAAGATGGCTGCGCCAGCGCCCGCCCGGGCAGTGCACCACGTCGGCGTGCGTCGAGAGAGAGAGGAAAAGAAAAGAAGAGAGAGAGAGAGAGAGGAAGGCGTGTGCTGGGATGCCACCGTGCGCTGTCGCCGTCAGAGTGAACCCCGGCGATGCGCCGCCGCTGCCGTCGCCCCGTCGTGGCCGAGCTGGCTGCCGTCGCGCCTCTGCTCCGCTGCGAGGAAGAAGGGGAAAAGAAAAGAAAAAAGAGAGGAAGAACAATATCCAGGGGTATTTTGGTACTTACACAACTCTTTCTCTCTCCTTTTTGACCAGAAATAATAAAATAATGGGAGGAGTGTCCAGCAGCTAATTATCACTTTTTTACGGTGTCCACGAGCAAATGCACGATCTTCGGGTGTCTCACAGTAAAGACCACAATCTTTCGGTGTCCTGTAGCAAATTTTGCCATGTAAGTAATACTATGTACATTGAACAAGGTAGGTTATCAAAAGTAGCGAATACGAATAACAAGGTGGTTATCAAAAGTAGCGATTTCTAATAACGAGGTAGGTTATATATCAAAAGTAGGTAATATAGCAGTTAATTAAGATAGAACTATGAACTCACACAAAAAAAGTAGCTAAGTTCAACTGTCCTTTGCCTCACGTGCTCTAAGAGCAGGTACAATAGCAGACTATTAGTCGGCTATAAATATATTTTAATGAGATAAAAGATGAGAGAGCTGCAGCACGGACTCCAAGACACAGTGTGTGTATGACAAGTGGGACCATATATTAATAGTATAGTAAACAACTATTGTATAAATTAACTATTAGATTGGATATAGGTGAATTGGAGCTAGTAGTGGACTATACTATTGAACTTGCTCAACTGTGTTGGCTCATCAGACAAAACATGTCGAACTTGCATGTACTACCGCGCCTGGAAGGCTGCGTTCGAGACTGCCGTATGACTCAAAGTGGCTGATTAGTCATTAGCGGTATGATTAATTAAGGATTAACAAACACACAGCTCTAATAGATTGATGTTATGTGTATGTGGTGTGCATATGATCGATGCGCACTAGATACTCACTCTAGATTTATCAACAACACAAACCATAATAGTTTTGTGTCAAAAAAAATAACGGAATTGCTATATGTGTCGCCACAATTTTGTTCATTTTATAGAAAGGTAGCCTACGCATTTGCGCGCGCAGGCAAGCATGTTAGATTGTGTTAGATTGTGTTTGAGAAACTTATAAAGGTATAATATTAACCGAAACTTATAATAGATAATTTGGCTTGTTAAGATTATTCGAACATATTTAGAAAAAAATCATAAAGTAATCATAATATTTTCTCTAATTAAAGGCACTCAATTTTTTATGCAGTGGCTCAGATTATTCTTATTTCAGTTAGTTAATATTGCTTATGTAGTGTGCGTTTAATTTAACAATACATGTTTCAAAACATGTCATGTTGTTGAATTATTTCTTTTTATTTTGGTAATTTGAATATGTAATTTTTATTTTGATTCTATTGATTTAATTTAGCTATGCATGTTTGTAGAATGATTCATTATGACATAATATTTATTGTCAATTCTTTAAGATATTTAGATGGTGTGCAAAATGCACGGGTGGACTGGCATATGTATAATGTATCTTATACATTGTTAGTTTAATTGAAAGAGAGAAGAGTTAGATATAAATCGGACATGTAGCTTTTAAAAAATTATAGCTGTTTCAACATTTTAGCAGCTAAAAAGTAAGGAATGGGAAGGCAGTGATATATCTGCATGTGAGAGGGAGGAGGAGGTGGAGGGAGTTTATTATTCTAAATAATTTAAAACATATTATAAGTTGGTCCATTTCTCTCCGAATTTCTTTTGTTGATTCTAGAGTTTTTAAGGCATAACATGTGTCGACTTAAGACTTTTTTTAAAAAATAGATCTAATGAAAATAATGAATCCATCGAGTTAAGTTGAATTATTTTTGTAATTTTTAAGATGTGATGCTTGGTTAAGAATCATCGGTTATATGAATAAAAATGCTAAAGGTATGCTTATAATTACAATATTTTATTTTTTTATCGGTTATAGTTGTTTAGCTGCTATTACTTTATTAATAACTAAAAATAAAATAAAAGCTTTAATTATTGATTAAAATCTATTTTTTACTCGTATGTACCTACAGTATAAACATAGTTGATATTAAACATGTGAACACTACAAATATATTTTTTAAAAGGAGCATACTACAAATCTAATAATCTAATAATGTTTTTTTTTACTTTTTATTATGATAGAATGGGGGGCTAATTATTTTTTAATATTATTCAAAGTTATGTTCATTTTAATCTAATTTATTTTTTATCAAGTTATATACGATGATAAAACATAAATTATATTTTTTATAATTCTATAATCCTTAAATGGCACGCAAAAGTCAGAAAACTTAGCCCTAACTAATGTTTCTGCTCTAAGTTGAATTAAAGTGGATATGGGTTTTATGATTTAGATATTATATTTGCTTAATTGTTTAACATAAAATTTTTGCTTTTCTAAAAACGTGAAAATAGGAGAATAAGTAGGTGAAAAAGAGGGGAAAAAATTCAGAAGGGAGGAACAGCGTACGTACGTACGTACGAACGTATATGCCATCAGGCCTAGGTGGGCCCGGATATGAGGAGATGATTCTTTTTGTAAATCTAATGGTTGTAAATAATGGGTCCACCAAATTTAATGAAAACCAACAGCCAGATGTTTTGGTTTTTTTAAGAATTTCTTTAATTTATCAGAGTGCCACATGGCGACTAAGGAGTGTTTATAGGATGCCACATGTCAGCTTACAAGCGTTTGTAGAAAGTTTAATGGATTTTAAGTATATAATATAAATATATAATAGACAGATAGATCTCAGATCATCCAATGCGGCATTGAGATTTGCATGTTGCAGTCGATTATCTTTAAAATTCGTGCTAGTATTCTCTTTAACTTCGAGATTAAACTGTATCACTTATGGATAAATTGCTCATACTAATTACATCGTACTTATAGTATAATTACATACACACATATGTAATTTTGGGATTTAGAATTACATTTAAATATACTAAAATTACATATGTAATTTAGTAAAGCCGACTATTTTTGATGAAAAATATGACGCTATCGATATAGCTACACCCTTACCGTATGCACACTTGTACATTTTCAGCGGGAGAAACGAAATGGGAATTGTTAGTGTGTTGATGGGCCTTGGGAATGAATGGGCGGTGCAAGCTCTGGTCCTTTTCAGCTTCACGCTGCAAGTCACCCTCCTCTCGCTTGCTTGGATCCGTCGGCACAGCATCGCCATCATGCCAAAGCTGGTCCTATGGGTGGCGTACCAGCTAGCCGACTCCACCGCGCTCTTCACCCTAGGCCACATGGCCATCAGCAGCAGGTCGAGGGAGGAGCAGCCGCTCATGGCGTTCTGGGCACCGTTCCTCATCCTACATCTCGGCGGTCAGGACAACATCACCGCCTACTCCTTCGAGGACAACCGGCTGTGGCTGCGCCACCTGCAGACCCTCGTCGTGCAGGTGATGGGTGCTTCGTATGTTCTCTACAAGTACATGCCCGGCAAGGAGACCCTGGTCATGGCGGCCGCCGTGCTCATCTTCGTGGTGGGCATTCTGAAGTATGGCGAGAGGATATGGGCCCTCCGGGAAGCCACCTTCGACAATATAGCCAGGTGTTTGGACCAGCAGGAGGATTATGCCAGCGCTCGCGAACGCGAAGGCGACGATCTTCTCCAGCATGTTCTACAAGGAAGGAGCTCTATGGACGAGGAGAACGTTCTGATTGGAGCACATGGCCTGCTCGACATTTGCCGAGGGCTGTTCATCGGGTCACGCGGTGGGAGGCGCGGCTACCTCAGGCATGTCCTGCTGTCCTTCCAAATGTATGGCCGTCTTGATAAGCTGATGGAGTTGGAGCTGTCCCTCATGTATGACATCCTCTACACCAAGGCCACCGTGATCCACACATGGATCGGGTGCTGCATCCGTGTCATCGCGCTTGCCGCCACGGTGACCGCCACGTTCCTCTTCCTGCTCAGCAGCAAACACGGGCACAGCAGGAAAGATCTCGCCGTGACATACGTCTTGTTGGCCGGGGCCTTGCTCCTGGAAATGATATCCATGGTGAGGGCAGTCTTTTCCACCTGGACGGTCGTCTTCTTGTACAAGCTGAAATGGTATTGGCTCTATGGCGAGGTTCTCTCCATCCGCCGTGTTTTCAGGGTGGCTACGCACAGGAGGTGGTCCGGCACAGTTGGCCAGCACAACTTCCTCTGGGCCAGCGCCAATGCCGTCGACGCCAGCGCCGCCGCGGAAGCGAAAGAGGAACCGCCGGCCAGCGAACCCACGGGTTACTACTGCTTGGACACAATGGACCGTTGCTGCTGTCACCGCACCAAGCTATCAGACTCTACTAAGGAGCAGATAATGAGGAAGATACTAGAGATGCACGAGAACAGACAGGAAATCGGGTCTCAACCTGGCGTGCGCGCGTTCAAAGCTCTCGGCCTGGACGGCAGCCTCGGCTGGAGGACCATCCAAGACATCGGCTTCGAGGATAGTATCATGGCGTGGCATCTCGCCAGTGACATCTGCCTCTTCAGTGACCGCAGCAACAAGCTGGATTTGCACGAGGGGGTGGCGGTTCTGTCCAACTACATGATGTTCCTCCTCGTGCACCGCCGGTACATGCTGCCAGGCCCCGTGCGTCGCACGCGGTACGAGCAGGTGCGCGACGATCTCAACAAGTTTATGCATCGAAAGGGCCGCGCTCGCTCGCCGCAGGACTTGTTCGTGTGGGCTCTTCGCAGGGGCCTCCATGATCATCTCAACTCCGACGATCCTCCGGCGCAGTACGACACCGGAGTAAGACTTGCCGCCGTGCTCTACCACCGGTTGGACAGGCTTGATATCATCTTTGGGGTGTGGGTGGAGATGCTGTCTTACGTTGCTTGCAACTGCAGCAGAGAGTCTCATGCCAGGCAGCTTAGCAGCGGTGGTGAACTCGTCACCATCGTCTGGCTTATGGCGAGGCTCGTCGACATGTCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015949