BGIOSGA015980
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Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
BGIOSGA015980 |
|---|---|
| Description |
Japonica Group Os04g0179700 (Os04g0179700) mRNA, |
| Definition |
Oryza sativa Indica Group BGIOSGA015980, complete gene. |
| LocusTag |
NM_001058710.1 |
| Ensembl Transcript ID |
BGIOSGA015980-TA |
| Ensembl Protein ID |
BGIOSGA015980-PA |
| Length |
5442 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:6510169..6515610 |
| Sequence Coding Region |
6510169..6510403,6511572..6511621,6511779..6512061,6512162..6512342,6512728..6512948 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome04:6510169..6515610 source=RiceIndica04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome04:6510169..6515610 source=RiceIndica04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGCGAGTCCTATGGAAGCTGTAGCCCGTTCCAGCCTCGTGCTCGCACCTCGCCGGCGGCGAGCCCTCGGCCTCCTCCCGGCGGCGGCCGCCCCATTCGTGCTAGATTGTCGCCGGCGGCATAACGGAGGAATGCGTCGTCCTCATGTCAGCTTCGCCTGCTCGGCCGAGCTCGACACCGGTCGCCGGCAGCTTCCTTCCACGGGGACTCGAGCGGTGATGTCGTCCTGTCCCGGATATGTTGAGGGGAGGATGGTAGGAGAAAATACAAGTCAGATAAACATGGGACGGGAGGCTAGAATACGTAGGCACTTGGAGAACCCGGAGTTCTTACCATCTTCATATGACATAGCATGGGTGGCTATGGTGCCATTGCCGGGCACTGATCATCTTCAAGCTCCATGCTTCCCTGAATGTGTGGAATGGATACTACAAAACCAACACAGTAATGGGTCGTGGGGTGTCAATGAATTTGACTCATCAGCCAGCAAGGATATTCTCCTATCCACTTTGGCATGTATTATTGCACTTGAGAAATGGAATGTCGGTTCGGAGCAAATAAGGAGAGGATTACATTTTATCGCAAAGAATTTCTCCATTGTTATTGATGACCAGATTGCTGCACCTATAGGCTTCAACCTCACATTCCCTGCTATGGTTAACCTTGCCATTAAGATGGGTTTGGAATTTCCTGCCAGTGAAATTAGTATTGATCAGATTCTTCACCTCCGTGATATGGAATTGAAAAGACTGTCTGGTGAGGAATCTTTGGGGAAAGAGGCATATTTCGCCTATATTGCTGAAGGTCTAGAAGAAAGCATGGTGGATTGGAGTGAAGTTATGAAGTTCCAGGGGAAGAATGGATCATTGTTCAACTCCCCGGCTGCAACTGCTGCTGCATTAGTCCACAGATACGATGATAAAGCCCTGGGATACCTATATTCTGTTGTCAATAAATTTGGAGGTGAAGTACCAACCGTGTATCCGCTAAATATATTTTCTCAGCTTTCAATGGTGGATACTCTCGTCAATATTGGAATATCTCGGCACTTTTCTAGTGATATAAAGCGCATTTTGGATAAGACATACATTTTATGGTCACAGAGAGATGAGGAAGTAATGCTGGATTTACCAACATGCGCAATGGCATTTCGCCTTTTGCGTATGAACGGATATGGTGTTTCCTCAGATGACTTGTCCCATGTTGCTGAAGCCTCAACTTTCCATAACTCAGTTGAAGGATACTTAGATGATACAAAATCCTTATTAGAATTGTACAAAGCTTCAAAAGTCAGTTTATCAGAAAATGAGCCAATCCTAGAGAAAATGGGTTGCTGGTCAGGTAGCTTATTGAAAGAAAAATTGTGCTCCGATGACATCCGAGGAACACCAATCCTTGGAGAGGTAGAATATGCTCTCAAATTTCCATTTTATGCCACGCTGGAACCTCTAGACCACAAGTGGAACATTGAAAATTTTGATGCCAGGGCTTATCAGAAGATAAAGACCAAAAACATGCCGTGCCATGTCAATGAAGATCTCTTGGCTTTGGCTGCTGAAGATTTCAGCTTTTGTCAGTCAACTTACCAAAATGAAATCCAGCACCTTGAAAGTTGGGAGAAAGAAAATAAGCTGGACCAGCTCGAATTTACGCGGAAGAATCTAATAAACAGCTATCTCTCTGCTGCTGCCACCATAAGCCCTTATGAATTGTCTGATGCTCGCATTGCGTGTGCAAAATCTATTGCGCTCACACTTGTTGCCGATGACTTTTTTGATGTCGGAAGTTCCAAAGAAGAACAAGAAAATCTCATATCCTTAGTCGAGAAGTGGGATCAGTATCATAAAGTTGAGTTCTACTCTGAGAATGTAAAAGCAGTATTTTTCGCTCTATATTCTACGGTTAACCAGCTTGGAGCAATGGCTTCCGCAGTACAGAACCGCGACGTTACAAAATACAATGTTGAATCGTGGTTGGATTATTTGAGGTCTTTAGCGACAGATGCAGAATGGCAACGGAGCAAATATGTGCCAACAATGGAGGAATACATGAAAAATTCAATTGTGACATTCGCATTGGGACCAACTATACTCATAGCACTGTATTTCATGGGACAAAATCTCTGGGAGGACATCGTGAAAAATGCAGAGTATGATGAGTTGTTTAGACTAATGAACACATGTGGTCGTCTCCAGAATGATATTCAAAGCTTTGAGAGGGAATGCAAGGATGGCAAACTGAACAGTGTGTCACTGCTTGTTCTTGACAGCAAAGATGTCATGTCAGTAGAAGAGGCTAAAGAGGCGATAAACGAGTCTATATCATCATGTAGAAGAGAGTTGCTACGGTTGGTTGTTAGAGAAGACGGTGTCATTCCTAAATCATGCAAGGAGATGTTCTGGAATCTTTACAAGACAAGCCATGTGTTCTACTCTCAGGCCGATGGATTTTCCTCGCCGAAGGAAATGATGGGTGCTATGAATGGAGTAATCTTTGAGCCACTGAAAACTAGAGGCAACTAG</cdnaseq> |
| Protein Sequence |
<aaseq>MASPMEAVARSSLVLAPRRRRALGLLPAAAAPFVLDCRRRHNGGMRRPHVSFACSAELDTGRRQLPSTGTRAVMSSCPGYVEGRMVGENTSQINMGREARIRRHLENPEFLPSSYDIAWVAMVPLPGTDHLQAPCFPECVEWILQNQHSNGSWGVNEFDSSASKDILLSTLACIIALEKWNVGSEQIRRGLHFIAKNFSIVIDDQIAAPIGFNLTFPAMVNLAIKMGLEFPASEISIDQILHLRDMELKRLSGEESLGKEAYFAYIAEGLEESMVDWSEVMKFQGKNGSLFNSPAATAAALVHRYDDKALGYLYSVVNKFGGEVPTVYPLNIFSQLSMVDTLVNIGISRHFSSDIKRILDKTYILWSQRDEEVMLDLPTCAMAFRLLRMNGYGVSSDDLSHVAEASTFHNSVEGYLDDTKSLLELYKASKVSLSENEPILEKMGCWSGSLLKEKLCSDDIRGTPILGEVEYALKFPFYATLEPLDHKWNIENFDARAYQKIKTKNMPCHVNEDLLALAAEDFSFCQSTYQNEIQHLESWEKENKLDQLEFTRKNLINSYLSAAATISPYELSDARIACAKSIALTLVADDFFDVGSSKEEQENLISLVEKWDQYHKVEFYSENVKAVFFALYSTVNQLGAMASAVQNRDVTKYNVESWLDYLRSLATDAEWQRSKYVPTMEEYMKNSIVTFALGPTILIALYFMGQNLWEDIVKNAEYDELFRLMNTCGRLQNDIQSFERECKDGKLNSVSLLVLDSKDVMSVEEAKEAINESISSCRRELLRLVVREDGVIPKSCKEMFWNLYKTSHVFYSQADGFSSPKEMMGAMNGVIFEPLKTRGN</aaseq> |
| Gene Sequence |
<dnaseqindica>1..235#1404..1453#1611..1893#1994..2174#2560..2780#2865..2985#3058..3155#3241..3455#3535..3647#3724..3819#3904..4119#4214..4355#4578..4823#5137..5442#ATGGCGAGTCCTATGGAAGCTGTAGCCCGTTCCAGCCTCGTGCTCGCACCTCGCCGGCGGCGAGCCCTCGGCCTCCTCCCGGCGGCGGCCGCCCCATTCGTGCTAGATTGTCGCCGGCGGCATAACGGAGGAATGCGTCGTCCTCATGTCAGCTTCGCCTGCTCGGCCGAGCTCGACACCGGTCGCCGGCAGCTTCCTTCCACGGGGACTCGAGCGGTGATGTCGTCCTGTCCCGGTATATGAGATCAAACTCCCTCCTGGCTTACCTTGGTTTGTTGGATGGAGTCATGGAGTCATGGGGTCCTATTTAGCGCGCGGGTCTAGATTCTTGAATCACGTTGTCTTAATTTTATATGTTCAATTATATATGGCGGATCTAGATATTTGTTCAAAAATAGACTCGGTGAAAGGAACCACCCCAACTTTTAGTTTGCTTTGTTTTGTTTTCTCGATTTATATCCAAACGTTATTATACTTGTATAAGTCATAATTTCTACTCTATAGATGCCAAAATATAGTAATTTCTTGGGTTTAATTTTATCCCAAATATAATAACTTAAATACTCCCTCCGTTTCACAATGTAAGTCATTCTAGCATTTCCCACATTCATAGTGATGTTAATGAATCTAGACATATATATCTATCTAGATTCATTAATATCACTATGAATATGGGAAATGCTATAATGACTTACATTGTGAAACGGAGGAAGTATGTAATAGACGTCTTTTTAACACTGAACTACACATACCATCCTTGACTTTTATTATCAAGCCAACTATAACCTGGGGTCCCGCACATCGAGAAGGTAAACAAGTATTTTTACCTATCCTTAATAGTCATGTCAAGGATTAAAAATGTTATATTTTAGGACAAAAGAAGTATTTTTCTACTAATAAGACATTACACAAAGCATAATTTCTTTAACTTGCTCCATTAAAAAAACATAAGGGTGAGTTGTCGATTTATTGATAAAGTGTTCAAAATGTTGACTGATGTATAAGAAAAAACCATTCACTTTAATTGAATACATAGCCACAATAAATTATTAATTATTGTACTTTAGGCATCAACTAGAAGCACGTGATGAATTTCCCAACTATGAGTTGGGTTTCTTCTAGCCTGAACCTTCATAGCTTTTGGTCCCACAATATTTTGATGGCTATATATATTTTAATAAAAATTAAAATTTCTTACAGTCTATGAGTAGTATGGGTACAAAGAAGATAGACGGTGGTTAATTACCCGGTGGACCAATACCTAAAATTCTCGTTTTCTGAAAGTTACTTTTTCAATGAAATGAAATTTACTGTTGTACAGTTAATATGGGTGCTGAATATTTGTGGTTTAAGAGTAGTGCCATACTGATCATTGTAACATAAATCTTCATCTGTTGAAACAGGATATGTTGAGGGGAGGATGGTAGGAGAAAATACAAGTCAGATAAACATGGTATGGTGTACGGACATCACATATATCGAACTTTCCTTTCTGATATAATTGGATGGAGCTTATTTAAAAGAAAGGCCGCAATAAATTTTATTATCTAAAGAAAAGTGTTTGAGCATCAAATCTTAATCAAACCCCTTCACCATTTTACACAAATTAGGGACGGGAGGCTAGAATACGTAGGCACTTGGAGAACCCGGAGTTCTTACCATCTTCATATGACATAGCATGGGTGGCTATGGTGCCATTGCCGGGCACTGATCATCTTCAAGCTCCATGCTTCCCTGAATGTGTGGAATGGATACTACAAAACCAACACAGTAATGGGTCGTGGGGTGTCAATGAATTTGACTCATCAGCCAGCAAGGATATTCTCCTATCCACTTTGGCATGTATTATTGCACTTGAGAAATGGAATGTCGGTTCGGAGCAAATAAGGAGAGGTATAGACATCAATTTAGTTACCTTCCAATAATTTGTTTCAATGTCTTATATGCTTTCGAGATTTGAATGATAATGAAAAATAATTAATTATGTTTGCAGGATTACATTTTATCGCAAAGAATTTCTCCATTGTTATTGATGACCAGATTGCTGCACCTATAGGCTTCAACCTCACATTCCCTGCTATGGTTAACCTTGCCATTAAGATGGGTTTGGAATTTCCTGCCAGTGAAATTAGTATTGATCAGATTCTTCACCTCCGTGATATGGAATTGAAAAGGTAAGTTAATGAAAAAAAATGTTGTCAAAATAGATTAGTGTTGTACCCAAAAAAAGAGCAACTTTTGTGAGTAATGTTATAATTTTAAAATAAATTTTTCCAATATGGAATTATGATTATAAGAAAAGCTTATATATGTTTCAGTTGAAATATTATTATAAAAGGCATGCAAATGTTTTGCTTGTGACAAAAAATAGTATCTGATTATGTACCTATGTCAAGCTGCTGCGTGGAGTCATATTTTGTATATAAACCTATTTAATTATCATGGTTATGACTTCTAGCATTTTACTTTACGGTTATTTTTTTTAAAAACCAATGGATATAGCAATAAGAATATTTTCATTATTATTATTGAGTCGTAAATACTTTTACAATTAATTAGACTGTCTGGTGAGGAATCTTTGGGGAAAGAGGCATATTTCGCCTATATTGCTGAAGGTCTAGAAGAAAGCATGGTGGATTGGAGTGAAGTTATGAAGTTCCAGGGGAAGAATGGATCATTGTTCAACTCCCCGGCTGCAACTGCTGCTGCATTAGTCCACAGATACGATGATAAAGCCCTGGGATACCTATATTCTGTTGTCAATAAATTTGGAGGTGAAGGTAAGAATTGTTTTTCCTTGTGAAAGATGTATAAGTGTGTAGACTATATTGCCAAATACTTAATATGGTATTGTACCCTTGCAGTACCAACCGTGTATCCGCTAAATATATTTTCTCAGCTTTCAATGGTGGATACTCTCGTCAATATTGGAATATCTCGGCACTTTTCTAGTGATATAAAGCGCATTTTGGATAAGACATACATGTAAGAACCATGTCTAATCAAAGGCCTTTTAAGAACCATGACTAATCTTGACATTATCTATTTTGCATGCAGTTTATGGTCACAGAGAGATGAGGAAGTAATGCTGGATTTACCAACATGCGCAATGGCATTTCGCCTTTTGCGTATGAACGGATATGGTGTTTCCTCAGGTATTTTAATACCAAAAAGTTTCTTTTCTTAGCAACACTATTCTCTTTTGTCTTGATCTAATTTGTTGTAAGTGATCTCACACAGATGACTTGTCCCATGTTGCTGAAGCCTCAACTTTCCATAACTCAGTTGAAGGATACTTAGATGATACAAAATCCTTATTAGAATTGTACAAAGCTTCAAAAGTCAGTTTATCAGAAAATGAGCCAATCCTAGAGAAAATGGGTTGCTGGTCAGGTAGCTTATTGAAAGAAAAATTGTGCTCCGATGACATCCGAGGAACACCAATCCTTGGAGAGGTGAGTGCATGAAACTTAAAATCCCCACTTCAGTTGGTCTTTAAGTTTACATACAATTCAGTTATTTTTCTAATTTCAGGTAGAATATGCTCTCAAATTTCCATTTTATGCCACGCTGGAACCTCTAGACCACAAGTGGAACATTGAAAATTTTGATGCCAGGGCTTATCAGAAGATAAAGACCAAAAACATGTAAGCATCATATTTCTGAAAAAAATTACGCATGGAATCGTGTCAATACATGAGCTAATATACTTTTCTGAACCAGGCCGTGCCATGTCAATGAAGATCTCTTGGCTTTGGCTGCTGAAGATTTCAGCTTTTGTCAGTCAACTTACCAAAATGAAATCCAGCACCTTGAAAGGTATTTCACTGGTATACTCTAGGTCTCTAGCTCACTTGTCTTAACTTCCACCCTTACAGTGCCAGCAAAATTTTCTTTTGACAGTTGGGAGAAAGAAAATAAGCTGGACCAGCTCGAATTTACGCGGAAGAATCTAATAAACAGCTATCTCTCTGCTGCTGCCACCATAAGCCCTTATGAATTGTCTGATGCTCGCATTGCGTGTGCAAAATCTATTGCGCTCACACTTGTTGCCGATGACTTTTTTGATGTCGGAAGTTCCAAAGAAGAACAAGAAAATCTCATATCCTTAGTCGAGAAGTATGGTTCTTGAACTTTATTCTTTCAAAGGTAGTATTGTTTGTTATGCTTTATTAATGAGTTATCGTTCCTGCTTTTCTAATGGTTGTCATAGGTGGGATCAGTATCATAAAGTTGAGTTCTACTCTGAGAATGTAAAAGCAGTATTTTTCGCTCTATATTCTACGGTTAACCAGCTTGGAGCAATGGCTTCCGCAGTACAGAACCGCGACGTTACAAAATACAATGTTGAATCGGTGAGTTTCATGTGTGATCCTCTAATTACGAATTTCATAACTTTTAAGTAATAGAGGCTTTTAGTGATCTCAACCAATTACATCAAGGTGATACAATTTTGCCGAGAACACTTCCGGTCTCTGTATAACCAAGATGCACATAGTCGTATGAAATTCATATTGGCTTGAAAACAACAATGTAGATAAGTATGTTGACATTACAATATATACATGAATTTGCAGTGGTTGGATTATTTGAGGTCTTTAGCGACAGATGCAGAATGGCAACGGAGCAAATATGTGCCAACAATGGAGGAATACATGAAAAATTCAATTGTGACATTCGCATTGGGACCAACTATACTCATAGCACTGTATTTCATGGGACAAAATCTCTGGGAGGACATCGTGAAAAATGCAGAGTATGATGAGTTGTTTAGACTAATGAACACATGTGGTCGTCTCCAGAATGATATTCAAAGCTTTGAGGTATTTTAATTACTCGCTTCTAATAAATTATTCGTACTTTCTATATTATATATTATAATATGATCTCAATTTGCCTTGAATCAAAGTAGAACACGAAATTAGTTTCATATATTAAATCCACCATTAAATATAATTTTATAGTATATTTGTTTTGCGTTACAAATGTTGCTTCATTTTTCAATTACGATTGAAAAAGTTTAACTTAGTACAAACAAAAAAAGTCTTAATATATAACGTATGGATCAGTTACTACTCCGGCCATACAAATTAAGTTTATGATTGGGTAATTCTGACAACTGATATGCTGTTGCAGAGGGAATGCAAGGATGGCAAACTGAACAGTGTGTCACTGCTTGTTCTTGACAGCAAAGATGTCATGTCAGTAGAAGAGGCTAAAGAGGCGATAAACGAGTCTATATCATCATGTAGAAGAGAGTTGCTACGGTTGGTTGTTAGAGAAGACGGTGTCATTCCTAAATCATGCAAGGAGATGTTCTGGAATCTTTACAAGACAAGCCATGTGTTCTACTCTCAGGCCGATGGATTTTCCTCGCCGAAGGAAATGATGGGTGCTATGAATGGAGTAATCTTTGAGCCACTGAAAACTAGAGGCAACTAG</dnaseqindica> 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| External Link(s) |
