BGIOSGA016017

From RiceWiki
Revision as of 16:05, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA016017

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016017, complete gene.

LocusTag

OS10G0192000

Ensembl Transcript ID

BGIOSGA016017-TA

Ensembl Protein ID

BGIOSGA016017-PA

Length

2489

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:8214262..8216750

Sequence Coding Region

8214262..8214532,8214615..8214711,8214808..8214932,8215022..8215100,8216060..8216750

Genome Context

<gbrowseImage1> name=IndicaChromosome04:8214262..8216750 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:8214262..8216750 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTAGCTATCATTTATGATGACCAAGTGGATCGTTTAGATCCCCTACTTCGAGAGGGTTCCGCATATTATGTGTCGAGGATGTCCATAGAGCCAGCTAGGATGATTTTGTATCAGTGGCTTGCAGACCATGCTTTTGTGTGTGTTTTCACACGTGATACTACTATTACTGAGATAGCAAACATGCATGAGAAGATATTGCCATTACTCCCTCCGCTTATGCCACTTGATCAAGTTTTCGAGTTTACTTACCATAATGACATTTATGTTGATGTTATTGGAATGGTCATCTTTGTAAGCTCTATAGGCTTTGTGGAAGGCTACAAGAAGAGGATCCCATATAGGAATATTCTTATAATTGATGGCAGTTTCAAACCTGTGATGTTAGTTATTAAGGATAAAATGCTTACCGACCATTTAACTAAATGGGCGAGATGCTCTTATGAGCAACCTATCATTGTAGCAACAATGCTTAGAGCAAAGCGTGAAGAAGACCATAGCCTGCACACTACATGCTTCAGTAGGGTGCAGTTTGATCCTAATGTTGCAATTGCACGTGAATTAAGGAAGAGCGAGAGCGATGAGGCGAGGGCACACGCTGCCAATGTGTCAACCGACAAGGTGATGTCGGTGTCGGCGAACTTGGTGCAGCTTCTATCGACGGGGACGGTGCTGGCGTACCAGTCGCTGTCAGCGTCCTTCACCAACCAGGGGGAGTGCTTCCGGGCCAACCGGTGGCTAAGCCTTGGCCTCGTCGTCTTCTTCTCCGCCACCTACGTCTTCTTCGCCTTCACCGACAGCGTCCTCTACAAGGGGAAGGTCTACTATGGCTTCGCCCTGCCGACTAGGCTCAACCTCTTCAACCTGAACAAGACAGAAGAGAAGAAGCTGTTCGACGACCTAAAGCCCGAGCTCGCTAAGTGGGGCCTCGGCTACGTCGACTTCGTGCACGCCTTCTTCTCAGCTGTCGTCTTCCTCTCCGTCGCCTTCAGCGACGTCGGCCTCCAGAAATGCTTCTTCCCGAACGCCGGCAAGAACGACAAGGAGCTGCTCAAGAACCTGCCGCTGGGGATGGCGGTGCTGTCAAGCTTCGTCTTCATGATCTTCCCTACCAATAGAAGGGGGATCGGGTCCCATTGCTCCAGCTCCGAGCACATCGACTCCTCCTCCTCCTCCAAGTCTGGTAAGAAAATCGACGGCTCCTCCTCCAACTCAGCAGGTGAGAAGGAGAAGGCGAACAAGCCCACCGCGAAGAACGTGTAG</cdnaseq>

Protein Sequence

<aaseq>MVAIIYDDQVDRLDPLLREGSAYYVSRMSIEPARMILYQWLADHAFVCVFTRDTTITEIANMHEKILPLLPPLMPLDQVFEFTYHNDIYVDVIGMVIFVSSIGFVEGYKKRIPYRNILIIDGSFKPVMLVIKDKMLTDHLTKWARCSYEQPIIVATMLRAKREEDHSLHTTCFSRVQFDPNVAIARELRKSESDEARAHAANVSTDKVMSVSANLVQLLSTGTVLAYQSLSASFTNQGECFRANRWLSLGLVVFFSATYVFFAFTDSVLYKGKVYYGFALPTRLNLFNLNKTEEKKLFDDLKPELAKWGLGYVDFVHAFFSAVVFLSVAFSDVGLQKCFFPNAGKNDKELLKNLPLGMAVLSSFVFMIFPTNRRGIGSHCSSSEHIDSSSSSKSGKKIDGSSSNSAGEKEKANKPTAKNV</aaseq>

Gene Sequence

<dnaseqindica>1..271#354..450#547..671#761..839#1799..2489#ATGGTAGCTATCATTTATGATGACCAAGTGGATCGTTTAGATCCCCTACTTCGAGAGGGTTCCGCATATTATGTGTCGAGGATGTCCATAGAGCCAGCTAGGATGATTTTGTATCAGTGGCTTGCAGACCATGCTTTTGTGTGTGTTTTCACACGTGATACTACTATTACTGAGATAGCAAACATGCATGAGAAGATATTGCCATTACTCCCTCCGCTTATGCCACTTGATCAAGTTTTCGAGTTTACTTACCATAATGACATTTATGTTGGTAAGTAGTTCAACTAACCACCCAAACAAATATTAATTTGTGACAAATAGAAGTTCTATTAACACTATTTTCACATGTGCAGATGTTATTGGAATGGTCATCTTTGTAAGCTCTATAGGCTTTGTGGAAGGCTACAAGAAGAGGATCCCATATAGGAATATTCTTATAATTGATGGCAGGTATGCACATACTTTTTTTTTTGGGGGTACATGTCTTTTTGTTTCTACCTTAATTTCTTATCACTATTTGCATTTGACATGTTTATTTTTATGTAGTTTCAAACCTGTGATGTTAGTTATTAAGGATAAAATGCTTACCGACCATTTAACTAAATGGGCGAGATGCTCTTATGAGCAACCTATCATTGTAGCAACAATGCTTAGAGCAAAGCGTGAAGAAGGTAAGCTGATGTGTCCTTGTTAATTTTATGTTCATCGATCTTATGATCAACAAAATTATGTAATATAATTGTTGTACCTTTTATTTCAGACCATAGCCTGCACACTACATGCTTCAGTAGGGTGCAGTTTGATCCTAATGTTGCAATTGCACGTGAATTAAGGAAGAGGTAAATAGATTTTTGACCAAAATATTTATTTTATTAACTATTTTCACTTATATAGTTTATTATGAATGGTTTTGCAGCCTCAGTATGGAGCTTACTGGGAAGTCTTCTCCATGATACATGAAGGGAGATGGGAAGTGCATCCGTATCTTTTGGGGATTATTTCTAGCTATATGCTTGCTGGAAGTATAAGATCCCGTTCGGTGGAAGCTATTTATAGCAATGATGCTTGCTAGAAGTAGGTGGGAATCTTGCTAGAAGTAGCATGTTTGCTAGATGATGGTCAATGCTCTGTTGCATTGGTGTTGTAATTGTATTATGGGACTATTTCGTGGTGACACATGTATGTCTCGCTGTAGCGGTTTACATGACATCTAGCTATTATTGTACGTTGCCCATGCTTTTGTGGACTTCAAGTAAGGAATATATTGCCATGCTTTGTTCTCTATTTTGGTATACATGTATTTTACTGTTCATGTTTATACTTTTTGATATTTCAGTAGATTTTCAAACTTTGCTCCTCTTGATGCCCCTGGAATCCCTGGAATTATTATGTGTTGTTTTATTATATTTGTATCACAATATTTCACTGTATCTGTTGCTGAATATGTAAAGATCATTAGATCAGATGTAATTGTTGTTTATGCTAAAATAATATTTTCTGTTGCGATGAACTGATTATTTCTTATCATCTCGCTAAGATTTAAAGTTGCCCTAATTTTTTTCCCATTGCAATGCATGGGCATCCAACTAGTATATACATACACACATGCACACACACTACACACACAAAGCTCTTGGAGCTGCATCTGCATGCAAACACCTACTATACAATATTACACACAGTGACACACACTATCGGAGAACATAGGTAAGTAAGCGCTTACGGCCGGCAACGATGGCGCCGCAGACAAGGAAGACGAAGCATCGGCCGCCAATATTGATCCAAAACTGCCAATCAGCGAGAGCGATGAGGCGAGGGCACACGCTGCCAATGTGTCAACCGACAAGGTGATGTCGGTGTCGGCGAACTTGGTGCAGCTTCTATCGACGGGGACGGTGCTGGCGTACCAGTCGCTGTCAGCGTCCTTCACCAACCAGGGGGAGTGCTTCCGGGCCAACCGGTGGCTAAGCCTTGGCCTCGTCGTCTTCTTCTCCGCCACCTACGTCTTCTTCGCCTTCACCGACAGCGTCCTCTACAAGGGGAAGGTCTACTATGGCTTCGCCCTGCCGACTAGGCTCAACCTCTTCAACCTGAACAAGACAGAAGAGAAGAAGCTGTTCGACGACCTAAAGCCCGAGCTCGCTAAGTGGGGCCTCGGCTACGTCGACTTCGTGCACGCCTTCTTCTCAGCTGTCGTCTTCCTCTCCGTCGCCTTCAGCGACGTCGGCCTCCAGAAATGCTTCTTCCCGAACGCCGGCAAGAACGACAAGGAGCTGCTCAAGAACCTGCCGCTGGGGATGGCGGTGCTGTCAAGCTTCGTCTTCATGATCTTCCCTACCAATAGAAGGGGGATCGGGTCCCATTGCTCCAGCTCCGAGCACATCGACTCCTCCTCCTCCTCCAAGTCTGGTAAGAAAATCGACGGCTCCTCCTCCAACTCAGCAGGTGAGAAGGAGAAGGCGAACAAGCCCACCGCGAAGAACGTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016017