Os07g0587500

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Revision as of 08:44, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0587500| Description = Armadillo-like helical domain containing protein| Version = NM_001066673.2 GI:297607542 GeneID:4343758| Length = 166...")
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Gene Name

Os07g0587500

Description

Armadillo-like helical domain containing protein

Version

NM_001066673.2 GI:297607542 GeneID:4343758

Length

1668 bp

Definition

Oryza sativa Japonica Group Os07g0587500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:24571991..24573658

Sequence Coding Region

24572156..24573160,24573264..24573347

Expression

GEO Profiles:Os07g0587500

Genome Context

<gbrowseImage1> name=NC_008400:24571991..24573658 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:24571991..24573658 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtcggacgcctccacctcgccgcgccggcggagcaccagctgctacagcgacagcggcgattcgtcatgctccgagccgttcagcgagtgcggcagcgacgacctctcgttcacgccggctgccgccgcgggaatccaccggctgctgctgtcgtgcgcggcggaggcgtcggacgggacgatctcgtcgctcgtcgcggagctggagtcgccgtcgtcgtcgctggactcgctacggcgcgccgcgatggagctccggctgctggcgaagcacaacccggacaaccggattcgcatcgcggcggccggggcggtgcgtccgctcgtcgcgctgctgtcgcacgccgacccgctcctgcaggagcacggcgtcacggcgctgctcaacctgtcgatctgcgacgagaacaaggcgatcatcgtggaggccggcgcgatacggccgctcgtccacgcgctcaagtcggccgcgtcgccggccgcgcgggagaacgcggcgtgcgcgctgctccgcctgtcccagctcgacggctccgccgcggcctccatcggccgcgcgggcgccatcccgctgctggtctccctcctcgagaccggcggcgcgcgcggcaagaaggacgccgctacggccctctacgcgctctgcagcggcgcgcgcgagaaccgcctccgcgccgtggaggccggtgccgtgcgcccactgctcgacctcatggccgacccggagaccggcatggtggacaaggccgcctacgtcttgcactccctcgtcggcatcgccgagggccgctccgccgccgtcgaggaaggcggcatccccgtcctcgtcgagatggtggaggtcggctccccgcggcagaaggagatcgccaccctctccctcctacagatctgcgaggacagcgctgcctaccgcaccatggtcgcccgcgagggcgccatccctcccctcgtcgccctctcccaatcctcctccgcccgccccaagctcaaaaccaaggcggaggcgctgatcgagatgctacggcagccacggagcgcgagcctgcgcgcgaggccaacggcggtcgttgcggcggagtga</cdnaseq>

Protein Sequence

<aaseq>MESDASTSPRRRSTSCYSDSGDSSCSEPFSECGSDDLSFTPAAA AGIHRLLLSCAAEASDGTISSLVAELESPSSSLDSLRRAAMELRLLAKHNPDNRIRIA AAGAVRPLVALLSHADPLLQEHGVTALLNLSICDENKAIIVEAGAIRPLVHALKSAAS PAARENAACALLRLSQLDGSAAASIGRAGAIPLLVSLLETGGARGKKDAATALYALCS GARENRLRAVEAGAVRPLLDLMADPETGMVDKAAYVLHSLVGIAEGRSAAVEEGGIPV LVEMVEVGSPRQKEIATLSLLQICEDSAAYRTMVAREGAIPPLVALSQSSSARPKLKT KAEALIEMLRQPRSASLRARPTAVVAAE</aaseq>

Gene Sequence

<dnaseqindica>166..1170#1274..1357#gcctcgctcggttccaaacgcaaagcacccaattccatttccgttcccctctcggcgaacagcctcgcctcctcctcctcctcgccgccgacgccgacgccgacgcctccccggcatttggttcgcgcgggtggtgccgtgagatacgtggtggacggggtagggatggagtcggacgcctccacctcgccgcgccggcggagcaccagctgctacagcgacagcggcgattcgtcatgctccgagccgttcagcgagtgcggcagcgacgacctctcgttcacgccggctgccgccgcgggaatccaccggctgctgctgtcgtgcgcggcggaggcgtcggacgggacgatctcgtcgctcgtcgcggagctggagtcgccgtcgtcgtcgctggactcgctacggcgcgccgcgatggagctccggctgctggcgaagcacaacccggacaaccggattcgcatcgcggcggccggggcggtgcgtccgctcgtcgcgctgctgtcgcacgccgacccgctcctgcaggagcacggcgtcacggcgctgctcaacctgtcgatctgcgacgagaacaaggcgatcatcgtggaggccggcgcgatacggccgctcgtccacgcgctcaagtcggccgcgtcgccggccgcgcgggagaacgcggcgtgcgcgctgctccgcctgtcccagctcgacggctccgccgcggcctccatcggccgcgcgggcgccatcccgctgctggtctccctcctcgagaccggcggcgcgcgcggcaagaaggacgccgctacggccctctacgcgctctgcagcggcgcgcgcgagaaccgcctccgcgccgtggaggccggtgccgtgcgcccactgctcgacctcatggccgacccggagaccggcatggtggacaaggccgcctacgtcttgcactccctcgtcggcatcgccgagggccgctccgccgccgtcgaggaaggcggcatccccgtcctcgtcgagatggtggaggtcggctccccgcggcagaaggagatcgccaccctctccctcctacagatctgcgaggacagcgctgcctaccgcaccatggtcgcccgcgagggcgccatccctcccctcgtcgccctctcccaatcctcctccgcccgccccaagctcaaaaccaaggtaatcatcaatcacatttcctcatcaaaacacaatcgttttacacgttcttgcaaattacaaattgggaaatcgtgtgttgatcggttttatgattacacaggcggaggcgctgatcgagatgctacggcagccacggagcgcgagcctgcgcgcgaggccaacggcggtcgttgcggcggagtgaccctgacctcgttcaattcaagtccccaacttggcggtgccccaggtgttgtgctttgcttcccctattccggcggcgaccggggccggcgccggccgccggcgcgcgcgtgtaaatataccaatcagcgtgtttgcgtccgcgagcgagtgtacattttcctcaagcgagatgacgacgaaggcgatggtggagcgaagaaaagtctcttgtaatttcattcttccccaccacttgttttttttttcacttcacttttatcccctaccttgcttggttgtttcctcctcgtcaaacgaggagaaggttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0587500, RefSeq:Os07g0587500