Os07g0588200

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Revision as of 08:44, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0588200| Description = Actin-binding FH2 domain containing protein| Version = NM_001066675.1 GI:115473082 GeneID:4343760| Length = 5888 bp|...")
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Gene Name

Os07g0588200

Description

Actin-binding FH2 domain containing protein

Version

NM_001066675.1 GI:115473082 GeneID:4343760

Length

5888 bp

Definition

Oryza sativa Japonica Group Os07g0588200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:24604698..24610585

Sequence Coding Region

24604869..24605959,24606054..24606253,24608978..24609219,24609508..24610299

Expression

GEO Profiles:Os07g0588200

Genome Context

<gbrowseImage1> name=NC_008400:24604698..24610585 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:24604698..24610585 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggaggagagttgcactgagcacggcgattgcgttgttagtgggtgctcaattatgtgtggcggcggaggtggaggtcgccggcgccggcggtggggttgtgcggcggcggtcgctccaccagccgttcttcccaatcgagtggtcgccgccgccgccgatgtccgggagcgaggccgtcccgccgccgccgcctgcggccgcggcgtcggccaccaccggcggggggcggtcgacgaccaccgtcatgaacaccgtcgccatcgcgctctcggcgggcctcgtggcgctcgcggtggcgtcctactcctgctgcctcctgctgcggcgacgacgacgcgaggaggaggacgacggcgaccgcgccgcgaagcgggcggtgggggcggcggcggcggtggcggcgagagtccctagcgatgtcgggagcagctcccgccagcaccggtcgccgccgccgagctcgacggcgtcggacgcgatatacctcgacccgctcacgacgctggtggaggtgcgccagcacgaaaagagcccggacctccgcccgctcccgctgctgaagcagccgagccctgacctccggccgttgccgccgctgaagcggccggaatcgcaacccccgcctccgccaccgtccactccgccgttgaccaccacggggtattccaccgacgaggaggaccaggccacgtactacaccgcgccgaagaccgccatgtcgtcgttcagccggagcacgagccagcacagcacgctggaacaaacagccatgccgcccatggccgcgcctgcaccgccgcaaaccaatcccccacgacctgttcgtccgccaccgccgccgcccccgccgaggcagaggctgctccggccgctcccggcagaatcgccgccgcccgccgcgctggccaatctggaactaaccggttcccccgtcaaacccgctgttgaagacaggggaggcgagaattccggcgccgcgcggccgcccaagccgccgcacctgaagccgctgcactgggacaagctccgggcaatctccggccgcaccaccgtgtgggatcaggtcaagaactccgacacattccgcgtcgacgaggaggcgatggagagcttgttcctgaacagcggcggcggcggcgcggggagctcggacccggcggcgaggagggggggatccgggaagcaggagaggcggttgcttgacccgaagcggctgcagaacgtcgcgatcatgctcaaatcgctcaacgtggccgccgacgaagtgattggtgcactcgtgcgtggaaatcctgaagatttaggatctgagttctatgaaacactagctaagatggcaccaacaaaagaagaagaattgaaactaaaaggttatagtggcgatttgtcaaaaattgatccagcagagcgctttctgaaagatgtacttggagttccttttgccttcgagagagtggatgcgatgctgtacagagcaaattttgacaatgaagtgaattatttaaggaaatcttttggaacattggaggcagcctgtgaagagttaagaagcagcaaactttttttgaagctgctagatgcagttctaaaaaccgggaaccgcatgaatgatggaaccaatcgaggcgaggcgagggctttcaagcttgatactctcctaaagcttgcagacatcaagtcaacagatggtagaacgacattgcttcacttcgtggttaaagagatcatccgatcagaaggcttcgattctgatcagagcgcggttaatcctggcagcggcagcaaggaacagttcaaaagggacggcttgaaattacttgcagggctcagcagtgagctctccaacgtgaagagagcggccacactggagatggacacactgagcggcaacatcctgaggctcgaagccgatctcgagaaggtgaagcttgtcctacagctcaaggagacttgctcagatcaaggcgcgagcgagaacttcttccaggcaatggttgtcttcctcagaagagcagaggcagagatcaagaacatgaaaaccgcagaggagaacgcgttgcgcctcgtgaaggagacgacggagtacttccatggcgacgccaccaaggaggagcctcaccctctgaggatattcgtggtggtggatgaattcctcctgatactggaccgtgtttgcagggacgtcggcaggacgccggagagggtgatgatgggctccggtaagtcgttccgcgtccctgcaggtacctcattgccgcctcatcggaatgagaaccggcgagttcttagctcctccgatgaggacagctcgtcatcttag</cdnaseq>

Protein Sequence

<aaseq>MRRRVALSTAIALLVGAQLCVAAEVEVAGAGGGVVRRRSLHQPF FPIEWSPPPPMSGSEAVPPPPPAAAASATTGGGRSTTTVMNTVAIALSAGLVALAVAS YSCCLLLRRRRREEEDDGDRAAKRAVGAAAAVAARVPSDVGSSSRQHRSPPPSSTASD AIYLDPLTTLVEVRQHEKSPDLRPLPLLKQPSPDLRPLPPLKRPESQPPPPPPSTPPL TTTGYSTDEEDQATYYTAPKTAMSSFSRSTSQHSTLEQTAMPPMAAPAPPQTNPPRPV RPPPPPPPPRQRLLRPLPAESPPPAALANLELTGSPVKPAVEDRGGENSGAARPPKPP HLKPLHWDKLRAISGRTTVWDQVKNSDTFRVDEEAMESLFLNSGGGGAGSSDPAARRG GSGKQERRLLDPKRLQNVAIMLKSLNVAADEVIGALVRGNPEDLGSEFYETLAKMAPT KEEELKLKGYSGDLSKIDPAERFLKDVLGVPFAFERVDAMLYRANFDNEVNYLRKSFG TLEAACEELRSSKLFLKLLDAVLKTGNRMNDGTNRGEARAFKLDTLLKLADIKSTDGR TTLLHFVVKEIIRSEGFDSDQSAVNPGSGSKEQFKRDGLKLLAGLSSELSNVKRAATL EMDTLSGNILRLEADLEKVKLVLQLKETCSDQGASENFFQAMVVFLRRAEAEIKNMKT AEENALRLVKETTEYFHGDATKEEPHPLRIFVVVDEFLLILDRVCRDVGRTPERVMMG SGKSFRVPAGTSLPPHRNENRRVLSSSDEDSSSS</aaseq>

Gene Sequence

<dnaseqindica>172..1262#1357..1556#4281..4522#4811..5602#gggggggggggggggggcaaacgctcgcatttgccactcctggcgaggcaaagcctctccaactttctcctaacgaaaaccacgccacgagaaggaagtgagccaacgacgctggaattttttgaaaatttcagagaaaatttaccggaggagttcgaatttctttcgggtatgaggaggagagttgcactgagcacggcgattgcgttgttagtgggtgctcaattatgtgtggcggcggaggtggaggtcgccggcgccggcggtggggttgtgcggcggcggtcgctccaccagccgttcttcccaatcgagtggtcgccgccgccgccgatgtccgggagcgaggccgtcccgccgccgccgcctgcggccgcggcgtcggccaccaccggcggggggcggtcgacgaccaccgtcatgaacaccgtcgccatcgcgctctcggcgggcctcgtggcgctcgcggtggcgtcctactcctgctgcctcctgctgcggcgacgacgacgcgaggaggaggacgacggcgaccgcgccgcgaagcgggcggtgggggcggcggcggcggtggcggcgagagtccctagcgatgtcgggagcagctcccgccagcaccggtcgccgccgccgagctcgacggcgtcggacgcgatatacctcgacccgctcacgacgctggtggaggtgcgccagcacgaaaagagcccggacctccgcccgctcccgctgctgaagcagccgagccctgacctccggccgttgccgccgctgaagcggccggaatcgcaacccccgcctccgccaccgtccactccgccgttgaccaccacggggtattccaccgacgaggaggaccaggccacgtactacaccgcgccgaagaccgccatgtcgtcgttcagccggagcacgagccagcacagcacgctggaacaaacagccatgccgcccatggccgcgcctgcaccgccgcaaaccaatcccccacgacctgttcgtccgccaccgccgccgcccccgccgaggcagaggctgctccggccgctcccggcagaatcgccgccgcccgccgcgctggccaatctggaactaaccggttcccccgtcaaacccgctgttgaagacaggggaggcgagaattccggcgccgcgcggccgcccaagccgccgcacctgaagccgctgcactgggacaagctccgggcaatctccggccgcaccaccgtgtgggatcaggtcaagaactccgacacattccggtgcgcccccctctcttcaccccccccccctccattcttccacattacccccatctctctgtttcaactgagctgtctatcgatggcgcggcagcgtcgacgaggaggcgatggagagcttgttcctgaacagcggcggcggcggcgcggggagctcggacccggcggcgaggagggggggatccgggaagcaggagaggcggttgcttgacccgaagcggctgcagaacgtcgcgatcatgctcaaatcgctcaacgtggccgccgacgaagtgattggtgcactcgtgcgtggtgagattgtgctctcaatttcttacttctcgcatgacgtatgtggtgtttggtcccctactactgtgtcattgtggaatttatcaattactactactgttatgtgctatgctctctgcaattccggtggccacatgtcattgcacagtagtacaatctagtcactgttaaattaagcacacaaacatatagtacctgacaagtgatttggtttgtttttttttttggaagatgagtaagcctgtttggtttctggggcaaaaaaaattctcagaattaccttactgctatcagagaaggaaatgaaagatgagctaaatgggagaaattccagctttttgactgtacttaattttctactagatgctaggttagcataatttatcaattcactctgtgctaccgttgaatttctgactcttctattcatctgaaatcgacaatgaaagtcggggcatctgtatgccacaaatcataaatcacatgtcagtatgccaccaagacctcaatgtccttacaaaatcatatttttagtaatcttgttgactgaacggcagtttttgagatatttaactctgtactcatcactataatcagtaaatatttctagaagtgtcacactgttctacaccaacgcacaaattatacctgaaggttctcgaaatttcaggcataagcaattgtcgtattgctcacctaacaaatatgggagtacatgcctagcataccagggaatctctctccctctccaatcccccaacatgacaccttttcctttaattttgatgtgaactgatagagaaggctcctatacttgtcctgcattttgacctccattgtcacattcaattatatttttggtggggggttactttcataatcaaattttctggatgtaatgcgttccaacaaggataatttgtgcaccataagtccgatgattacatggcaatgctgtgtttgttccaaataagcttctattggttgatgttaagtttctagagctgagatcctgggactgtgggtgcaagtgactggactggagtatcactatgcgatgaaacatggacgttttctttttgttatgtaacttttaatttgttggtacatatacttttgtgaatagccagtgatacagtctgttgccaaaaatatatttttaaagaaacagtgatgtagcatcattggtcatgtcatgttaggccatggtgagatcagtaggcagattgtgacatggatagaataggcgagatgcatctttcacaaagacactagtgctttaccttttcgtgtctgttctgtattgtgataatgttatattacatgtctgtattttcaatgtgataatagctgcatttactagtggcatgcacacagatgagctgtcagttgctttagaacttctgcactattagtttgtagaacgtagattatgaggacttccttgccaattttcattatccaaattaaacttacatcttcatttcaaggtttgttttctcattttattcatcacaaaccatcaacttctctcttatattggcctacagacgtgtcactcgtttatcgtttgagctggaaataattggtgatataatttctattattttttattgtgaatatgttaacacaatattcttgagtttatcatgtccaatttgtgaaccaggattctataggttttgtgagttactaatccattcttaaagtaattgaataacaaattaacttggttgatattacatacattgctcattgttaaaaaaggacagttgaaattcttgtacaccgaaacaaatctggttgaattatagaagtggttgtagtaggtctaaacgtctagtttcatcaatgccttactgtcaagggacatcccttaccaaacttaggtgttttattgcctgatcttgaatagtacaatcatctttcaggttgttatttgaccatctatatatgctaagaaatatgttttctttttgtagataaaggcatattgcattccgtactaaaaactacatatgtcatcatgataagcatgtcacattccgtgctataaactccatcatatgtcatgagtgataagttgtcagagatcacgactgtgttgggaggctaactaccagtgaacgctattgattattgttgttggtgtacaaataaaattcagtagaaaccataactgaattgttgcttctttacccatgcacagtgacttatatccccagattttcctattatttctattgttaggcgtctcgcccggcgaaaaaaatttttgcccggcgaaaattgttaggcgtctctgtatgtggttggtatacatcaactagaattatgaatgctgtgaacctttgtgggattatttaatcatcactgttacgtgcatgcacggtttccttagggaattcctattatagaaaaggttaatgctgtgtatgctacagtagtgggcctatgatgcagttgttttcttatgatgtcacatggaaacattcattggctatgttggatacttggatccaacaacttccattccaactggagtatttgtttattgtccagagccaacatatctcatcaatagttcaatacatttggcgtgatatttaaaacatagttgacagtactcagtgaaaactcttgcataactgcattactttttggagtatgaatgatgcaacttttgcctgatttagttataaatgttttaatctgtgttaccaggaaatcctgaagatttaggatctgagttctatgaaacactagctaagatggcaccaacaaaagaagaagaattgaaactaaaaggttatagtggcgatttgtcaaaaattgatccagcagagcgctttctgaaagatgtacttggagttccttttgccttcgagagagtggatgcgatgctgtacagagcaaattttgacaatgaagtgaattatttaaggaaatcttttggaacattggaggtaaaatagctatgatgatcttatcattccatgaagcttacaatacttcctccattttacctaccaattatatcaaattaccaactgtttagatattattctcttctcttaaaaaatgtaaatttaagataggtgttttcatgcttcacaaaagatatgccacacattctaagtttctcacccgtgatctgtccccaaaaaaaaaaaaatcaaatagatcacttatcaaacttctgaattctcaattattttggagtaaaatgtaatattccttcagaaatctttcaggcagcctgtgaagagttaagaagcagcaaactttttttgaagctgctagatgcagttctaaaaaccgggaaccgcatgaatgatggaaccaatcgaggcgaggcgagggctttcaagcttgatactctcctaaagcttgcagacatcaagtcaacagatggtagaacgacattgcttcacttcgtggttaaagagatcatccgatcagaaggcttcgattctgatcagagcgcggttaatcctggcagcggcagcaaggaacagttcaaaagggacggcttgaaattacttgcagggctcagcagtgagctctccaacgtgaagagagcggccacactggagatggacacactgagcggcaacatcctgaggctcgaagccgatctcgagaaggtgaagcttgtcctacagctcaaggagacttgctcagatcaaggcgcgagcgagaacttcttccaggcaatggttgtcttcctcagaagagcagaggcagagatcaagaacatgaaaaccgcagaggagaacgcgttgcgcctcgtgaaggagacgacggagtacttccatggcgacgccaccaaggaggagcctcaccctctgaggatattcgtggtggtggatgaattcctcctgatactggaccgtgtttgcagggacgtcggcaggacgccggagagggtgatgatgggctccggtaagtcgttccgcgtccctgcaggtacctcattgccgcctcatcggaatgagaaccggcgagttcttagctcctccgatgaggacagctcgtcatcttaggagcaaacatttttggtgcataggttagctgataagatttgagagtagtgattcttccggagctgaacattgtggtgtatagactgtaatcaccgtcagaaataagggagtcgtcactgtctgtcactgttaaaagtagatgtttaccaaagctaaagaaaggtagctgtacaaactacaaaggcattcagtattatggtagtatgttcttaccattcagctcaaatagcatctgtttgagaattatcatattaagagaaaatatatttgttggaagtgtaacttc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0588200, RefSeq:Os07g0588200