Os07g0588500

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Revision as of 08:44, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0588500| Description = WD40-like domain containing protein| Version = NM_001188352.1 GI:297725834 GeneID:9267070| Length = 4177 bp| Defini...")
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Gene Name

Os07g0588500

Description

WD40-like domain containing protein

Version

NM_001188352.1 GI:297725834 GeneID:9267070

Length

4177 bp

Definition

Oryza sativa Japonica Group Os07g0588500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:24626040..24630216

Sequence Coding Region

24626040..24626204,24626408..24626538,24626883..24626965,24628105..24628374,24629340..24629415
,24629566..24629646,24629725..24629803,24629911..24630011,24630108..24630216

Expression

GEO Profiles:Os07g0588500

Genome Context

<gbrowseImage1> name=NC_008400:24626040..24630216 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:24626040..24630216 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcaccgctcccaccggcgatccgccggtccgcgtcgccgtcgctagcggcggtggcgggatggggttggggaaggagctgcgggagccgccgtcggacggcgtctccagcctccggttctccaagcacagcgatcgcctgctcgtctcctcctgggacaagacggtgcggctctacgacgcggaggccaatgtgcccaggggggtgttcatgcacgcggcgtccgtcctgggttgctgctttcacgacgactcctcggggttcagtgccagcgccgacaacaccgtgcggaggttggccttcagttctggtgggaattatttcttggtacgccatgatgccgcagttagttgtgtcgagtactcctactctactggacaagttatcactggcagctgggataagactataatgtgctgggatccaagaggtgtcaatgggacaagtcatcatacacttgttgggacacataaccaacctgaacgtgtgtactcactttcagtatcaggatataacttggttgtcgcaacagcaggaaggcatgtgaatgtttatgatttgcgcagtatgtctaggcctgagcaacagagggagtctccactaaggtatcaaacacggtgtgttcaatgctatccgaatggaactggatttgctttgggttctgtggaaggacgagttgctatggagttctacgatcaatctgaatctgctccctataagaagtatagtttcaagtgtcatcgagtgcctgaggatggagagaccaaagtctatcctgtcaacgcaatttccttccacccagtacacggcacatttgccactggtggatgtgatagatttgtgaacctttgggatggcgctaacagaaggaaactgtttcaatttcccagatacccatccagcatcgctgctctgtctttcagtagggatggccgtctgcttgctgttgcatccagttacacttacgaggagggagacataccccatccgcctgacgcaatctttatccgtgatgtcaacgaagtacaagtaaagcccaggcccaagatcacattcactgatccgccatcagtagcgtccccatcagtttga</cdnaseq>

Protein Sequence

<aaseq>MSTAPTGDPPVRVAVASGGGGMGLGKELREPPSDGVSSLRFSKH SDRLLVSSWDKTVRLYDAEANVPRGVFMHAASVLGCCFHDDSSGFSASADNTVRRLAF SSGGNYFLVRHDAAVSCVEYSYSTGQVITGSWDKTIMCWDPRGVNGTSHHTLVGTHNQ PERVYSLSVSGYNLVVATAGRHVNVYDLRSMSRPEQQRESPLRYQTRCVQCYPNGTGF ALGSVEGRVAMEFYDQSESAPYKKYSFKCHRVPEDGETKVYPVNAISFHPVHGTFATG GCDRFVNLWDGANRRKLFQFPRYPSSIAALSFSRDGRLLAVASSYTYEEGDIPHPPDA IFIRDVNEVQVKPRPKITFTDPPSVASPSV</aaseq>

Gene Sequence

<dnaseqindica>1..165#369..499#844..926#2066..2335#3301..3376#3527..3607#3686..3764#3872..3972#4069..4177#atgagcaccgctcccaccggcgatccgccggtccgcgtcgccgtcgctagcggcggtggcgggatggggttggggaaggagctgcgggagccgccgtcggacggcgtctccagcctccggttctccaagcacagcgatcgcctgctcgtctcctcctgggacaaggtgagctggagcaaagcaatcacgcgctccgatcggtcggatcggcgcctcgctggtcgcgcgcgccgccgcttgctatttgtttgggaaaaaaagcaaaccctagcgtttgggttggtttgatttgatttgatgatttgatccatggggttttgatggggggagctttgcttttggttgcgggtgtgttcgccgtcccgcagacggtgcggctctacgacgcggaggccaatgtgcccaggggggtgttcatgcacgcggcgtccgtcctgggttgctgctttcacgacgactcctcggggttcagtgccagcgccgacaacaccgtgcggaggtgatgccgatctccttccagtcccgttcgattggttcttcattgagcgattcagttgagataacggttgcactcttagttcactattgttttgtgctgttctgaatggaattggggctttctgtaaactaatcctccatttcgcggacgtacactatgatgttaaaaataggatatgggggtaattttagggtttgatcatagtatgttacgaacttggatcaacgatcagtatcaaaattgtgctaattcatattttgcttttctgttagttcagatcactcatgtaagttgaagcaaaactgatggcttgtgtgttcctggaactttttttttttttgcaggttggccttcagttctggtgggaattatttcttggtacgccatgatgccgcagttagttgtgtcgagtactcctactctactggtacctgttatcgcattttcatctagctgaaaagtgtcgttgattcacccaacttgagtttttactttttagaggagtcccttccgccgacctggcagtttttagagaagtcgctagttgaattcatgattaagtttctagatgaggcaggtctatctcttggaatttgttaatttcatcctaaaaagtactagagcagtgggatcagaacatttactagttgatttcatgttttagtccctcctgagaagggtaatcctatcctagtaagctggttaatctgatttcagaatgaaattccttctttgttaaagacacataaccatcttttgtcaccgtgctacatgagtttttaaatagtttggctatgttctttaccattttaggttgaacagtttatcaaatacccattccatgtaggagtagttgcttataatatccatcttctgtagctattgcttatattctttttatggttgacatgatcattcaatcatgttgtattcaaaggtcatttgaatgtgaattcttcaattgtgtggtcccaattcactgtccagaatggtcgtcagtaactgttgaatgaatattgattaatcctagcaggatagctatctaatgggccatgttgtttactcgttatacctgcatatgtatcgttgatgaatattatagtaaacagtgcatgaatttaggcttaagaaatttgctactgtgtgaagtgatccttgcttactgctacatcacttcagtcaccactttgtgaaatgttttggtaaattctatctacctcttgaatcttccaatataacattcttaatgtatgtacacactacttttgaaattttaagcacgaagctgatgcctgatgccattatactatgatgatttataatgacatcaagttataattaactaattttacttcatgtttatttgcgtcactgcattgaagtagccacttgcatgaagatattaagaaaccaaccatatcaaagcttaaactgtctccttatatatgtggcagtcatttcctgtaaaacctcaattcagttagtgcaataattgccttacaatttgttgcttcttaatgatatcatggagcattttgtgtttacctctaccatgtttcacgccaggacaagttatcactggcagctgggataagactataatgtgctgggatccaagaggtgtcaatgggacaagtcatcatacacttgttgggacacataaccaacctgaacgtgtgtactcactttcagtatcaggatataacttggttgtcgcaacagcaggaaggcatgtgaatgtttatgatttgcgcagtatgtctaggcctgagcaacagagggagtctccactaaggtatcaaacacggtgtgttcaatgctatccgaatggaactggtaaggcactgttacttgattcgagtatttcttcgaacacttaagatctatgtgtgctaaataatgcccatgatatgttcactcttttttatttgtgagcaacataaaactgtgctaggtaaagaatgcttgtctagtttgatattgaagatccttattggtcagttggaaatagactatgaaactcaagtcatactagcttgtaataaatttctacatggttgctgttcccctagctcttgagttccatacttgcatgtatgattgaaatataaggtgcttgaaattcattcgattatattgttattgttttcgtgtgcctgacttcagctgatatacaagttgcttcaaaccatcatttttgtattggtcatttcggctctgttgcttctttacaatatacctgatgtgtttcctaatatactgaggtatgtggaggcatctcatatgtctgttattgacatatgcaattgatgtggaaatcatgaatgcacatccatgtattcttcattaccagagcatttgactgtttcatcttcccacgcctaatttctgattacatttgctgatttgcatggcagtggcaataattataaatttaataacaagagatatttttctagtttttgcaagggttctagccttaaattttatcttgcacgtaaaaaatgttacccaatagtggtcccgactactgaacatgaaggcaccatttttcaggacaaaaggcacaggatgactcatgcaatagatattttatttcgatttcaaatattcattttctaaagtaggtaatgcgaggatatcatctcttgaactaagtgacagctatcttttatttttatgccgtcttttaaatcttcttttagtttcttattaaaattcagcaaagcaccattgagtaaggttccaaagttttacttactagtttaggctttgaattccttgacataactttgatacaggatttgctttgggttctgtggaaggacgagttgctatggagttctacgatcaatctgaatctgctccctataagaagtatgcacctaagctgctgaaggaaaactctttcctgatagctatttacttaagctgatattattagctttgccggagatcatctttttaatctacatattctgctgtgttccatttatatacgtagttacatgcctttattctatccaggtatagtttcaagtgtcatcgagtgcctgaggatggagagaccaaagtctatcctgtcaacgcaatttccttccacccagtgtaatgaaatccccactgatccctcacaaacggttgattattttccgtttctttaatggcctcatctaacatatgcagacacggcacatttgccactggtggatgtgatagatttgtgaacctttgggatggcgctaacagaaggaaactgtttcaagtaatagtcccgcgaactattttttgaagatctctaattctctattctgtatcacaaattcacatcagaatgccttagttcttttttttttcatcttttggttgcagtttcccagatacccatccagcatcgctgctctgtctttcagtagggatggccgtctgcttgctgttgcatccagttacacttacgaggagggagacataccgtaagaccagaatttgtctaacccaactattctctgtcagtattaagtattaacagttgaaactggttctcaccagcattattttgtacaatgcagccatccgcctgacgcaatctttatccgtgatgtcaacgaagtacaagtaaagcccaggcccaagatcacattcactgatccgccatcagtagcgtccccatcagtttga</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0588500, RefSeq:Os07g0588500