Os07g0589400

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Revision as of 08:44, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0589400| Description = Quinonprotein alcohol dehydrogenase-like domain containing protein| Version = NM_001066685.1 GI:115473102 GeneID:4343...")
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Gene Name

Os07g0589400

Description

Quinonprotein alcohol dehydrogenase-like domain containing protein

Version

NM_001066685.1 GI:115473102 GeneID:4343770

Length

4667 bp

Definition

Oryza sativa Japonica Group Os07g0589400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:24680540..24685206

Sequence Coding Region

24680541..24680811,24681009..24681103,24682655..24682758,24683353..24683453,24683529..24683595
,24683683..24683782,24684207..24684320,24684386..24684523,24684602..24684686
,24684766..24684812,24684953..24685096

Expression

GEO Profiles:Os07g0589400

Genome Context

<gbrowseImage1> name=NC_008400:24680540..24685206 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:24680540..24685206 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tgcgtcgcggcctccgctacccgacgacgccgccgcggcccgcgtcatctccttggctcgccgcctgcgccgtcgtcgcgccggtctccgtcgccgggcgccctgctgcttccatcgcatactctcgcctctgaccccgagtccatctccccgtcccggcgtcgcctcggcctcgactcccgtctcctcgaggagttcgccccgtcgcctgcggccgatctccatccatcccgcgagcggcggtgcggtgttcctgctgcttccgcctccgggcgggagagggaggagcgggtgaccatggtgagcatggaggtcaccgatgagatgttcaagtgcatggaggttgggctggccttccgggactataatggaagaatcagttctatggatttccacagcaaggctacaaattacctcgtgacagcatgtgatgatgaatcaattcgcctatatgacattcaaaatgctgtgtgtttgaagacgattaatagcaaaaaatatggggttgagcttgtgtgcttcactgaaaacccaacttatgtcttgcattcttcaaaaaatggatgggatgattctctccgtctactctcactggtcaataactgttttttgagatatttcaaaggccatctagacagggttgtttctatctcattgtgctctgagaacgggaacattctctctggttcacttgatcgaacagttctcctatgggattcaagggttgaaaaagcacagggtttgctgcgtgttcaggggaggcctgcagtttcttatgatgatcagggtttggtttttgcaattgcatatggtggctacataaggatgtttgatgctcgaaattttgagaaggggccttttgatattttctctgtcggtaatgatgattcagaagccaatgtcataaagttcagcagtgatggcaggcggcttcttttaaccaccaaagctgggcgtgttcatgtgctagattcatttcatggcaataatatagcaacatacaacgtgaagccagtggtaagcaattcgacgctggaagcatcattcagccctgatggaaaccatataatatctggctctggtgatggcagtgtatatgcttggaatgttaggagtggaaaggttgctcgctggggaagcacagatagtgagccaccgctaattagatgggctccaggatctttgatgttcttgactgcatcttcggaactgtcttgttgggtccctgatctatctaagctgggatcctttactgttagtaagtaa</cdnaseq>

Protein Sequence

<aaseq>CVAASATRRRRRGPRHLLGSPPAPSSRRSPSPGALLLPSHTLAS DPESISPSRRRLGLDSRLLEEFAPSPAADLHPSRERRCGVPAASASGREREERVTMVS MEVTDEMFKCMEVGLAFRDYNGRISSMDFHSKATNYLVTACDDESIRLYDIQNAVCLK TINSKKYGVELVCFTENPTYVLHSSKNGWDDSLRLLSLVNNCFLRYFKGHLDRVVSIS LCSENGNILSGSLDRTVLLWDSRVEKAQGLLRVQGRPAVSYDDQGLVFAIAYGGYIRM FDARNFEKGPFDIFSVGNDDSEANVIKFSSDGRRLLLTTKAGRVHVLDSFHGNNIATY NVKPVVSNSTLEASFSPDGNHIISGSGDGSVYAWNVRSGKVARWGSTDSEPPLIRWAP GSLMFLTASSELSCWVPDLSKLGSFTVSK</aaseq>

Gene Sequence

<dnaseqindica>2..272#470..564#2116..2219#2814..2914#2990..3056#3144..3243#3668..3781#3847..3984#4063..4147#4227..4273#4414..4557#gtgcgtcgcggcctccgctacccgacgacgccgccgcggcccgcgtcatctccttggctcgccgcctgcgccgtcgtcgcgccggtctccgtcgccgggcgccctgctgcttccatcgcatactctcgcctctgaccccgagtccatctccccgtcccggcgtcgcctcggcctcgactcccgtctcctcgaggagttcgccccgtcgcctgcggccgatctccatccatcccgcgagcggcggtgcggtgttcctgctgcttccgcctccggtgagcaccggcgccgacgcgcatcctctctcattctcatccttctctaccccacacctcctctctttgccttaactttgatcttctcttctcgatctggaagctaggttttctctttgtcttaaccttaggactaataacagttttttccccccaaaaaaattggggggtccgccccttgctgttgatttttctagggcgggagagggaggagcgggtgaccatggtgagcatggaggtcaccgatgagatgttcaagtgcatggaggttgggctggccttccgggactatgtaagattctgctgttacacggtgttttttgcttctatcgactactggaattggtgtttcccttttgctttgcttgtgccattttcttctaagtgttacatgggttatcattgctgtcatggctcttaggtgatgtatcgatgaatcgaaaggcgttgcttgtcgaatatatcaactttagtttagtttagtggatgaattttaatagaaggggcttaaggtttcattggattggagtgcctagtgagttcattcataatcgatgtcactccatggacacttgtggtggtagaggacatgttcttgaacaatatatgctattacgggcaattattttgaactaaatatgaagatgccatatttagagatggcatgttggtatttgtgaattatactagttcaaatagtttgccatacattctacctttgatacaaaacagtgcaaccctctagttggttccatcttaagaggaacagaaactaaataaagaaatagccataatggtgttcgcttacttaacccctgaaatcctgaattagaaaaaaaaactaaataaccccctaaggtgcttacgtggaacaccacggaactgaaacaattctctcttttttttttctttcatttgccttctcttatcctacttttctattcaccccttttctctctgatatagcagctttagaatttgattacaacttactagctaaatcctagctttttagggataaaacaaaatgttacataatattatttcctgaaataaacaacattaatttgttttttactatatgtagtgctcgccttgattatttatgtggcaacccaataacattgctgcaatatgaagaggtgtggtggcagattcattgccacaaccaccatcgcatctttcaaatggagtatagatttgttgaagcattgacacattagctgctatggtggcaaaaggcatgtgtaaaaccttatcgggtttatttagatggtattagatagttcatggggttatctagacactttcgcagtcagagggctaagtagatcaaccctgacagctaagtggtagcttggactggaaactttttttgcatgtaataagtcctgtaaacaatgttaaccaatcgaaaagatatcagtttatctcttggtgtacttaatatatttacatttcatatcgtgagatattagcaattcataaagtgtgagtgaaactaaacagagaatgtgaagaacaaagaaattcatctagtctaactgtagagcatgctactgttgtttaattcgggcctttcacccatcatgtacaatcacacctgtcagtttcttggctgctctttcttcaataattccttgcgggtatgttggtcgggatgtcaattagcaatctcaatgtgtactctgaaaattaatgtatattcagtacatattctttgatgaaccatttgtacatatttcactttacattagaatgttgcctagtatctactgacttagttaaaatattctctgcactggccatttcattcttcttatggggcttatttgtatttcagaatggaagaatcagttctatggatttccacagcaaggctacaaattacctcgtgacagcatgtgatgatgaatcaattcgcctatatgacattcaaaatgctgtgtgagtataaacaattaatctcaatgttcttttttgtgtctccaattgtgtaaacagtttgaacagctcttactttcatcccctctgttgatttttataaggtgtatttttatttcaaaactcaagtttgttgattttgatcaaggatttatcaagttacaagtacatttagtgtaaaagccaatatagacacatttcaaagctcttttgctcaatattttttatggatacctagaatatattttatgagaaaacaacggtcaaaatttaatcttgaggactctttaaaattagaataagccttataaaaatcaaagaaggtagtaattgccctttttgcatttagttgtcagtcactcagtcttgattttttttgtacaacaatttcagctcctgttttactgtactgcagtactacatacattttattctgaagggcaagggcttacctattctagtgcttgtattttttttctttcaatactgtatctgttttcaaagtatttgatttatatctaaattttgtcaagtagtgattttattttggcggtcaatattcagttatatgtatttgaatcacttacctactttcaggtgtttgaagacgattaatagcaaaaaatatggggttgagcttgtgtgcttcactgaaaacccaacttatgtcttgcattcttcaaaaaatggatgggatggtaagtcctatattgtcatagcttcagagtgatataagtcatgtatacaaatacttaaaataattaactgtgcagattctctccgtctactctcactggtcaataactgttttttgagatatttcaaaggccatctagacaggtttgccaaactttataataaatataaattccaataaaatatgtcggttagccaataccaacagaggatactatctgtcttaatcagggttgtttctatctcattgtgctctgagaacgggaacattctctctggttcacttgatcgaacagttctcctatgggattcaagggttgaaaaagcacaggtacatttctcctcaataagtttactgtttgactgcttgactactttcccgtcaatttggcaacctgcagtttacagtcaattaaggcttttacagatttagtttatcttatttctgattatcggttaaaaagacttcttattgtcctccatcagtccatctgatggtgaaatatcattctgaagcccagatgtatgatttttgcaactaaatacttacaagcccctttaattacgtacatcatctttttttctgaaaacggaaattgggttcctcacaatcctaaacaagtcatatatgtatgcatccattttatttctctgaggttctgtacctttattgagcattgggcatgttacagtagaaatgttgatggtatggttggggagtgtttactagcaaaagcatctcttggattttgtagggtttgctgcgtgttcaggggaggcctgcagtttcttatgatgatcagggtttggtttttgcaattgcatatggtggctacataaggatgtttgatgctcgaaattttgagaaggtaatgggaatgagtatgttgtttgatcttaattacccaacccatttaacttcttacatccacaggggccttttgatattttctctgtcggtaatgatgattcagaagccaatgtcataaagttcagcagtgatggcaggcggcttcttttaaccaccaaagctgggcgtgttcatgtgctagattcatttcatggcaataatgtaagcatgcaaactatctttggtaatttatattttgcagacttgttatgtggagactttgaccttttcctttttcagatagcaacatacaacgtgaagccagtggtaagcaattcgacgctggaagcatcattcagccctgatggaaaccatataatatctggtgacccacttttctctaacatcctttgtgattatttggcacatcctctttcattacctaatatttatttttcatgcaggctctggtgatggcagtgtatatgcttggaatgttaggagtggaaaggtatgtcaaatatagtttttgtactccctttgtcccaaaatatagctactgcacttctccatgtataaccggaagtagctatattttaggacggagatcgtagttgtttgaaagagatgataatatggtcggacatgcaggttgctcgctggggaagcacagatagtgagccaccgctaattagatgggctccaggatctttgatgttcttgactgcatcttcggaactgtcttgttgggtccctgatctatctaagctgggatcctttactgttagtaagtaattcgaatggtacgagttgttgtttgtgtatgctcaggcctttgttctagctgtttgcaaaatgacaatgttaggtaaaaatctgagctgcagtgggtcaagcctcgggtc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0589400, RefSeq:Os07g0589400