Os09g0475400
| Gene Name |
Os09g0475400 |
|---|---|
| Description |
Basic helix-loop-helix dimerisation region bHLH domain containing protein |
| Version |
NM_001069994.1 GI:115479730 GeneID:4347359 |
| Length |
7343 bp |
| Definition |
Oryza sativa Japonica Group Os09g0475400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 9:18861332..18868674 |
| Sequence Coding Region |
18861554..18861566,18861708..18861815,18862335..18862586,18863171..18863377,18865696..18865822 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008402:18861332..18868674 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008402:18861332..18868674 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgggcatccaagggaacaaggcgacgacgcgcgagcacgacttcctctcgctgtacaccaccgccgctaaggatccgtctctccagctccacgacgccaagccgccgcctccttcccaaggtttcttcctgaggacgcacgacttcctgcagccgctggagaagccgacgccggcgccgacgccgcctccgacgagccagctgcagcagcagcagcagcaagcgttccccggcggcatcggaacgttcagcatcagccacgtcgccggcgcacgcccggtcgcggctgccgtcgtcaaggccgagccgacgccgttcgttctctggggccagcccgccgccgccgccgccgcgcacccggtcgccgcactagggcaccaccaccaccaccaccagtggacgctccccttcgccggcgtcgggcaggtggccgccaccgcggcgaggcagcagcaggagtggaaggggcgagtcgggggaggcgggttcatggactctggctccagatccagtggcggcgccgggttcgacgacgacgatggcgtggccgcgcggcgtgaggtctcgtcctcgctcaaagagttgacagtgagggtggatgggaagggtgggagctgcagtggaagtggtactgatcagcggcccagctcaccacgttcaaagcactctgctaccgagcagcgtcggcgcagcaagatcaatgacaggtttcagatacttagggagctgttacctcatagcgaccaaaagagagacaaagcaacatttctgttagaggttattgaatacatacgctttttgcaagagaaagtgcagaagtttgaagcttcagtccctgaatggaaccaagaaaatgcaaagatacttccatggtcaaacatatattttagatcgttctggaaaaattcacaaagtaaaggtcagaaccctggagatgatttgcctgatccttcacagttcatccggaatgggtcctcttctgggtataatttcactggcaaacctgatgataaccacaacatggtgacatcagcagctgcctcaggggcacaagaactggtggaaactgaccatgcagctagcgtgtcctacagatcagcagaaactccgacaaacattaccaacaatgttacatcccaagcccaagcccagtgggctagtccggctggtgtggatgactgtgcaatgaacagcgaaatgttaaataaccaacagttggcaattgatgaaggaacaataagcttgtcaagccaatattcccaacagctacttggtacgttgactcatgcccttgaaagctcaggtgttgatctgtcccaatccagcatatctgtgcagatcaaccttggcaagcgagctgttaagagacctggtgctgatggatcctccagttctaaggagctccccagtacatcagcgaacaacgaaaacatgggtcaccagctgacgatgttagggggtggtactgaagaacttccacacccaacgaagcgccataaatcgggcaacagctga</cdnaseq> |
| Protein Sequence |
<aaseq>MGIQGNKATTREHDFLSLYTTAAKDPSLQLHDAKPPPPSQGFFL RTHDFLQPLEKPTPAPTPPPTSQLQQQQQQAFPGGIGTFSISHVAGARPVAAAVVKAE PTPFVLWGQPAAAAAAHPVAALGHHHHHHQWTLPFAGVGQVAATAARQQQEWKGRVGG GGFMDSGSRSSGGAGFDDDDGVAARREVSSSLKELTVRVDGKGGSCSGSGTDQRPSSP RSKHSATEQRRRSKINDRFQILRELLPHSDQKRDKATFLLEVIEYIRFLQEKVQKFEA SVPEWNQENAKILPWSNIYFRSFWKNSQSKGQNPGDDLPDPSQFIRNGSSSGYNFTGK PDDNHNMVTSAAASGAQELVETDHAASVSYRSAETPTNITNNVTSQAQAQWASPAGVD DCAMNSEMLNNQQLAIDEGTISLSSQYSQQLLGTLTHALESSGVDLSQSSISVQINLG KRAVKRPGADGSSSSKELPSTSANNENMGHQLTMLGGGTEELPHPTKRHKSGNS</aaseq> |
| Gene Sequence |
<dnaseqindica>223..235#377..484#1004..1255#1840..2046#4365..4491#5253..5322#5411..5506#5614..5652#5745..5955#6068..6209#6306..6438#6793..6909#gcccgctgctggtagaggagaaggcgaagccaagccaagcgaagccaagcaaagggaagcgaagcggagaaaagcttgtcttgtagagaggaggggtctctcgtcgtctcgcgtcggaattctcgcgttgtggccgcggcatgattggtccggcgagcgatcgcggcgagtcggcagcggcggcggccgggaggcggtgggattgatcagcgagctacaattatgggcatccaaggtatgacgcacgcacgcatggtgagatcgaatgcaaagcatgcggagatgtcccgtgattttttctctttcgccgtggatccatggctgcgtcgcctaattcggcaaaagccgcgtcggtctcgtgttgctcgcaacgcagggaacaaggcgacgacgcgcgagcacgacttcctctcgctgtacaccaccgccgctaaggatccgtctctccagctccacgacgccaagccgccgcctccttcccaaggtctgaaaaaaaaaacccttcaattttgcctcttaatttctcggcgcaattctgctctctctcgtctcagttcttcgagctccgaactagcggttgcttgggcggtaggtagatctgtgaggagttgcagaatttggaaatttcgctgacaaatcaatcgggatggaaatcacgaaggggggcaggtgcgcaagaccattggttagttaattagcaagtcagtaagtacattattagcgctatcgcgtgtgatggtaggggttcaaatttcgtgcaaagttcgtgatgggaagcgacaaccaaaagcaacgaaaggatcacgtgtgggttggacgcaaggagccgtcgacggccttccatcctatctggctgggacccacccctccaacccacgggcttaatcatgattagcctggtcataaccctagctctagcttgtcaatactactagcctactagcacgtataccctctctagcttcttgttccaacttgtactgagatgttagaattaccgcaggtttcttcctgaggacgcacgacttcctgcagccgctggagaagccgacgccggcgccgacgccgcctccgacgagccagctgcagcagcagcagcagcaagcgttccccggcggcatcggaacgttcagcatcagccacgtcgccggcgcacgcccggtcgcggctgccgtcgtcaaggccgagccgacgccgttcgttctctggggccagcccgccgccgccgccgccgcgcacccggtcgccgcactaggtacgcacatacatacactcgtctacagcgaatacctgcggcgccgcgcgcgcgcgcgcgcacgccgccgcggtagctagtggacgccgctctcgcgttcgcgtttgccttttccggtcgccgacgttgacgctcgcgggggcacacgcgctgcgcggtgcgcgagcgcatcgccttttctcctctccttaccgcggtcgctttcgcggcatcacactcgcgcgcgcgtgcgcgtgagaccgagggagaaaggtggaggagggccgagggggaggggacaagctgggcctcgatcggtgggccgggcgatcagaagtttgggccggaaaatggggcccatgttgtccgtgcaaaactgagccttcgtctagtcgtcacgcgtcccaccacgtgaacgccaggtgcttagccgccggacgcggcccaccaccggtggccgccaccgcggctacggccacacgcgcgtctccacgtagagcaccactatcccactgacatgtgggccagtgggcattttctctgctgccttagacaaaagctaaaggcgagcactttgtcattgtgtgtactcctccactgtgcagggcaccaccaccaccaccaccagtggacgctccccttcgccggcgtcgggcaggtggccgccaccgcggcgaggcagcagcaggagtggaaggggcgagtcgggggaggcgggttcatggactctggctccagatccagtggcggcgccgggttcgacgacgacgatggcgtggccgcgcggcgtgaggtctcgtcctcgctcaaaggtaccccaattccgttcaattccgctcggtttcgcgagaaattttgttgttctgggttgctggccgcgtcgatggtggagaatccgcgggttttgcggggttttggcatcgttttcccccaattttttggcctgtgttttatgcgagaagcagagaaatgccccgttgttggtgctcacgaggtagtgtttgtgtagcagagaggaggagggagggtaggggggaagaagggaggaggaggtcgcgtgagctcatggagatggagatggagatgtactcgcggtgcgcgcggccatcccacatccaccagctgcatgcgcgcctcgtggtctccggccgcctccgctgcacctcgccgtcgctcgcgctcgcgctgctccgcgccgcgtgccgcgtgcgcgcgtcgccgtgcctgcgtcccctcgcccaccacctgctcgaccatatcccgcgcccgcacccgcatctgctccacgcggccgctcgcctcgcgtaccgtctgcgcctgccttccctcgcgctccgccactatgtcgccctccgcacgcaccacccggtgttcctccctcccgcagcggccatcgcggacatgctcaagtctgtccgtggccgcgccgcgcatgcccacgcgctacgcgtcaccgcccacgcaggggacactaggttcctggataacacacttgtcgcgatgtactttgcctgtggagatgtccagcgcgcacggcttgtgtttgagggaatgtgtgaccgggatgtcatctcatggacatcgctaatctcaggactagtgcaaaatggcagccccttgcaaggtatacagcagtttgcaacgatgatgcactgtgatgtacgccctgactttgtggtgctagtgaccgtcgccaaggcgttcatggagcttgataacctgccaggtgctgaatcagctcattccttagttgtcaagggcggtttccatgatgaacaagatgtgatgatcacattgacagccatgtatgccagctttgggtgcttagtagctgcgagggcgctttttgacatggtcccaccccagcaggtgaatgtgatcctgtggaatgccatgatatcaggttactccaagaatggatttgccagtgaggcagtgcatttatacaagcatatgcagctggttgctaggaacttggctcccgattctatcactttgcgatcagtaatatttgcatgtgctcagcttggctccactgagcttgcggcatggatggaggattgtgtatgccgcagtgagtacagggaggatgtgcttgtgaacacagctttgattgacatgtatgccaaatcagggagcatctctcatgcacgtgcagtctttgaacggatgcatgtggatgaccgtgatgtggtagtctggagtgctttaatcacgggttatggtgtgcaaggccttgtcaatgaggcttgcactttgtttcaggacatgaagcttgctggagtaagaccaaatgacgtgacattccttggacttctatcagcatgcaaccatgcaggtgctgttgagaaaggatggagctactttcactctatgaaacctgactatggaattgagccccagcaccagcactatgcttgcgtggtagacctgctttctcgtgctggacagcttgatagagcctaccaatttatactgaatatgcccatcaaaccagagatgactgtctggggcgctttactccatggttgcaagatgcacgggcactcaaacatggccatggctgaatgcgcagcacagcacatttttgagttggagcagtccaatgcagggcactatgttcagcttgcaaacatgtatgcatctgcagggatgtggagccaagtcgctggcatgcgagtcaccatgagagagaggggtgtcaccaaggcaacggggtttagcttcatcgaggttgatggagagatgcactcattccatgcttgggatcactcgcacccgagggccaccgagatattcgccatgctgtgccttctttctccaactccaaccggagttggagggtgaaagttgttgagtgcctttaactagccatgcattgtttgtatcctgcaattgtttatgacctgagcagtcttcagtcagcattcattctgttatttgtatcttgttatgataatgcaaccacaatatatttcacaacagaacacctgaaccaacgaaaagaaaacgaaaaaaatattttttacataccagtacagcttatttatttacatatatggagtaaaatattctatggaacattcccctcaccttatttggtactaatgaatttttatttatgtagcagagttgacagtgagggtggatgggaagggtgggagctgcagtggaagtggtactgatcagcggcccagctcaccacgttcaaagcactctgctaccgagcagcgtcggcgcagcaagatcaatgacaggtaacatttcctgtatccggagtttctgaaccatagaaatggctattacagtatgattgtctgcaggacctttggtgctgtagattatgtttgaccacatgttatgttccctggatgaagagaatatactgcaggaatagagtgcctggttataaagtattgcaaaaatttctggtgtatttgtacatattgaggcaatgtttgtacctattaaatacagtgaatttgaaaagaaatcccaaatcagttttttaaacaaaaatcacaaaagggtataaagtgcactttactgagttatgcaagagcacattggcacaaaactacaaatcctctccatccaaaaaaaccctgaagttctcttttttaatcttgcaatctggaaaatcgaagacatgagtactaatgcttgttgaagactaagcaggtgtctagaggatgcattgtctaaataacttttggacatgtaattggtcgggcttcccttttgtatactgacaggaaaaaaatgtctttgtgaagtctcttaagtctagtattatgagtaaattgtcatattttgttcatgataaacaactggaaccacattcaatcgtcaaaaccatatgaatttctgagatcataaaggttatgcatgtaacgctaccaaatatttactttgaaagatcgtaggtatatgttcatgtggaacggaatgggtcgcttatatgaagttgagcaaacacttgtgtaactgtttcctttactctgcatcatttccacaggtttcagatacttagggagctgttacctcatagcgaccaaaagagagacaaagcaacatttctgttagaggtatgctcgtagcagcagcctatttgatccaattagtctctccgaggtaatcagcttggttatttttttaacaccctttctaatgcaggttattgaatacatacgctttttgcaagagaaagtgcagaagtttgaagcttcagtccctgaatggaaccaagaaaatgcaaagatacttccatgggtaattactactcatttttatcctcccaagccagcgctgcttgattagcatttttatgaagtcaaattttggctgtctgcgtctgaacacagttttgtattttgcagtcaaacatatattttagatcgttctggaaaaattcacaagtaagttactgttgatattatacccttttcaaataatttcatttttcaattggtattctgaccagcatcttcctcatgctcttgtgctgcagagtaaaggtcagaaccctggagatgatttgcctgatccttcacagttcatccggaatgggtcctcttctgggtataatttcactggcaaacctgatgataaccacaacatggtgacatcagcagctgcctcaggggcacaagaactggtggaaactgaccatgcagctagcgtgtcctacagatcagcagaaactccgacaaacattaccagtatgattgctaatccacaattgatttaatttttagaatagttttctctgctacctttctgagaccagaagcaggattggttattcacgaataaatctttctttgaacgtagacaatgttacatcccaagcccaagcccagtgggctagtccggctggtgtggatgactgtgcaatgaacagcgaaatgttaaataaccaacagttggcaattgatgaaggaacaataagcttgtcaagccaatattcccaacagtacgtctttaaaaatataattcccagtgttattttgttccccttgctgggaaaagtacattgatgcataggtttgtttttgttgacttactacaggctacttggtacgttgactcatgcccttgaaagctcaggtgttgatctgtcccaatccagcatatctgtgcagatcaaccttggcaagcgagctgttaagagacctggtgctgatggatcctccagttctaaggtacatcaaagatattcatatgcccggctagagattcattttaaggatacaccatcagcaaaacttgaatagtcacaatcattcctgttgccagtttgtgatgaactgcgaacaaaatgaattgtttgacattatcctagtgcatgcgcattgcttattagacatatttgcatgaacttaactcaaagtcttaaccggtaacccatacacacccccacacccgcaaacccccataaagagcacggaggtgattctcacaaatatatctaggtatctaacatctggtattttgcattgatcaacgccatcctccccgacagatatctgatctgatgccactttacatctatgtaggagctccccagtacatcagcgaacaacgaaaacatgggtcaccagctgacgatgttagggggtggtactgaagaacttccacacccaacgaagcgccataaatcgggcaacagctgatggcggttctcactctgttgcatcatccagaccgattgatcattctttcctccctaccaaccagccaggacattccagaattggatgtacattatgttagcagtgacggcatcgcgttgaacaaggcagaccttggtgtaattctttcattcaatcacttggccaacctgttttaagaaaaaaaaaagaccaaagaaaggcgcttctcattgtggattgtgaagctgctcttgtacacaggcttccattcctatgagaagctcccccctgacaagacagtcagtcctacgttgtaacctgtatgataactcagctgcacctgttagctatgtgaagtagtaattcgttgaagtattctagatctctagtgcttcattgcacatcacttctctatctctgacctattgtgctgatgagtgaagtattaatccttt</dnaseqindica> 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| External Link(s) |
