Os07g0592200

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Revision as of 08:44, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0592200| Description = Peptidase A1, pepsin family protein| Version = NM_001066696.1 GI:115473124 GeneID:4343783| Length = 7606 bp| Defini...")
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Gene Name

Os07g0592200

Description

Peptidase A1, pepsin family protein

Version

NM_001066696.1 GI:115473124 GeneID:4343783

Length

7606 bp

Definition

Oryza sativa Japonica Group Os07g0592200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:24789873..24797478

Sequence Coding Region

24790243..24790414,24790906..24791003,24791089..24791190,24791359..24791480,24792796..24792972
,24793968..24794040,24794160..24794256,24794337..24794419,24794780..24794936
,24795060..24795487,24796917..24797037,24797169..24797434

Expression

GEO Profiles:Os07g0592200

Genome Context

<gbrowseImage1> name=NC_008400:24789873..24797478 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:24789873..24797478 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagtcgccggtcgcgtcggctcggctcgctcgtgcccttcgccgccgcggtggtcctcctcctcctcatcgcttccgccgccgccgccgccgcgggatcccccgatcgggccggccccgcgcggccgccgctggtgctcccgctcacgctcgcctaccccaacgccacccgcctccccgcctcctcggccaggcgcggcctcggcgatggacacaaccccaacgcccgcatgcgcctccacgatgatctcctcaccaacgggtattacacgacgaggctgtacatcgggacgccttcgcaggagttcgcgctgatcgtggactccgggagcaccgtcacctacgttccctgcgccacctgcgagcagtgcggcaaccaccaggatccacgattccaacctgatctctccagtacatattcaccagtaaaatgcaatgttgattgtacttgtgataatgagaggagtcaatgcacttatgagaggcagtatgctgaaatgagctccagcagtggtgtgcttggcgaggacattatgtcatttggcaaagaaagtgaacttaagccacagcgtgctgtttttggctgtgaaaacaccgaaacaggagatttgttcagtcaacatgctgatggtattatggggctgggccgtggtcaacttagcataatggatcagcttgttgagaagggtgtcattagtgattcattctctctgtgctatggtggaatggatgttggtggtggtactatggtacttggtgggatgcctgctcctcctgacatggttttctctcattcaaaccctgtccgcagcccgtattacaacattgagttaaaggaaatacatgttgccggaaaggcattgcggttagacccaaagatattcaacagcaaacatggcactgtcttagatagtggaaccacatatgcttacctgcctgaacaagcatttgttgcatttaaagatgctgtgacaaataaagtaaattctctgaagaaaatccgtggcccagatccaaattataaagacatctgctttgcaggtgctggaaggaacgtctcccaattatcagaggtatttccagatgttgacatggtatttggaaatgggcagaagctttcgctttcacctgaaaactatttgttccggcattcgaaggttgaaggggcttattgcttgggtgtgtttcagaatggaaaagatccgacaacactattagggggaattgttgtccgtaatactcttgtaacctatgaccgtcacaatgagaagattggcttttggaaaactaactgttcagagttgtgggagaggctccatattagtgaagttccttcatcagcaccttcagattcagagggagatatggcaccagctcctgctcctagtggtttgcctgaatttgatgttggcctaatcactgttgatatgtccataaatgttacttatccaaacctgaaacctcacctccatgagctggctgagcttatagctaaagagctggacattgactcccgtcaggttcgagttatgaatgttacaagccaaggaaactctactctaatcagatgggggatttttccagctggaccttctaattctatgactaatacaacagcaatgggtatcatttatcggttgacccaacatcacgtccagttgcctgaaaatcttggcagttatcagttacttgaatggaatgtgcagcctttatccaagaggtcatggttccgagatcatgtagtctctatactgcttggaattttgctagttgttttgctgactttatcggcccttttagtactgattgtctggagaaagaaatttagaggtcaagcggcatatagacctgtggattcagcagttcctgagcaagagctccaaccgctataa</cdnaseq>

Protein Sequence

<aaseq>MASRRSRRLGSLVPFAAAVVLLLLIASAAAAAAGSPDRAGPARP PLVLPLTLAYPNATRLPASSARRGLGDGHNPNARMRLHDDLLTNGYYTTRLYIGTPSQ EFALIVDSGSTVTYVPCATCEQCGNHQDPRFQPDLSSTYSPVKCNVDCTCDNERSQCT YERQYAEMSSSSGVLGEDIMSFGKESELKPQRAVFGCENTETGDLFSQHADGIMGLGR GQLSIMDQLVEKGVISDSFSLCYGGMDVGGGTMVLGGMPAPPDMVFSHSNPVRSPYYN IELKEIHVAGKALRLDPKIFNSKHGTVLDSGTTYAYLPEQAFVAFKDAVTNKVNSLKK IRGPDPNYKDICFAGAGRNVSQLSEVFPDVDMVFGNGQKLSLSPENYLFRHSKVEGAY CLGVFQNGKDPTTLLGGIVVRNTLVTYDRHNEKIGFWKTNCSELWERLHISEVPSSAP SDSEGDMAPAPAPSGLPEFDVGLITVDMSINVTYPNLKPHLHELAELIAKELDIDSRQ VRVMNVTSQGNSTLIRWGIFPAGPSNSMTNTTAMGIIYRLTQHHVQLPENLGSYQLLE WNVQPLSKRSWFRDHVVSILLGILLVVLLTLSALLVLIVWRKKFRGQAAYRPVDSAVP EQELQPL</aaseq>

Gene Sequence

<dnaseqindica>7065..7236#6476..6573#6289..6390#5999..6120#4507..4683#3439..3511#3223..3319#3060..3142#2543..2699#1992..2419#442..562#45..310#ccccttccttcctcctcctcggctcggcgcgacgagtcctcgccatggcgagtcgccggtcgcgtcggctcggctcgctcgtgcccttcgccgccgcggtggtcctcctcctcctcatcgcttccgccgccgccgccgccgcgggatcccccgatcgggccggccccgcgcggccgccgctggtgctcccgctcacgctcgcctaccccaacgccacccgcctccccgcctcctcggccaggcgcggcctcggcgatggacacaaccccaacgcccgcatgcgcctccacgatgatctcctcaccaacgggtcggtacagttcgttttttgccctccgctctctctctctcgataatttcccccaaatttttttttcttgggggggttgcgtggttggatctgaggctggatgtcgccgcgtgttgttcgtgctggtttaggtattacacgacgaggctgtacatcgggacgccttcgcaggagttcgcgctgatcgtggactccgggagcaccgtcacctacgttccctgcgccacctgcgagcagtgcggcaaccaccaggtcggcctggattcgtcaaattctctgcttacctgtttgaattgtgtgtgacgatcggtttaattaggattggtgatggtcgcgtgtatggatattggattcccatatgtcaaactgtcgcttgaccattcaggttggacaattgactccagtgcaaatgatacatttttgtcgggcttgggtgtgtgcatagacatttattgttccaaaattcaaagtcttggaaaatacacgtttccatttggataggttcggaagttccagctatacgatgtggataaagtgtatggtacgcaaagagcacctccacaacctgcagggtatattaaaactaaccgagcgacgatgatgtagcttctttttttctcaattgtgaatgcctcagaatttaatagaggtcaacatccaacaaagcccatgccaatcttggtcacaaccaacaagaattactatttgtttgatagccatcattttagccaaattttgcaccattttgttttcaaaccattggcgttcctggttgtcaacagttagtcgattcttctttgttttttctccatgccaaatgagtcccatgtctttcctgagtgctgacaattatcaggcaatagatttgggaagtgtattggattgtttatggcaaagcagtggaaacaatttgtattaacaccaattttcctaccaagtaaacccactgccatgtccagaatacacatctggtattgctatgcaatttgatgtttgttgctcccttatcgttctctgaattttgggctttagattcaaacgtcacatagaaaacatatccatatgaaaaggcaaatatgttactgtatttttcacttctttctgctacatacccagccttttcttgggcaactgtttgcatggttagtcaggccactgttctcttgtagtcctgtataatctgagtagtttggaaatcttccatcagttgtagattgctactattgctgataagtaatagaggagtccacaactaatgggaagcccataacctgattctaaaaagaactgttcttgtcacttgcatagttgcatctttttgacacaattgtatcattcttatcataacttgtgatttttctagattctagatggcaccattgttgtaccatcctcttattctatgtcatgtttgcagagtgaatcacctaacatcattgaggcacatgtaaaagtttaagcatttatactatttaatttatattaatgtgtgtacaaacagtgtgacaatattttggcatgatttctccaatgcgatgtatatcttacgtgataaaaaaagttaagatgtgtatttgatcatacccattgagaaaatcacctttttcccacttgaagtttcctttttaactatctagaaatcaactttctctagtatacactaaagtttggcatgttgtaggatccacgattccaacctgatctctccagtacatattcaccagtaaaatgcaatgttgattgtacttgtgataatgagaggagtcaatgcacttatgagaggcagtatgctgaaatgagctccagcagtggtgtgcttggcgaggacattatgtcatttggcaaagaaagtgaacttaagccacagcgtgctgtttttggctgtgaaaacaccgaaacaggagatttgttcagtcaacatgctgatggtattatggggctgggccgtggtcaacttagcataatggatcagcttgttgagaagggtgtcattagtgattcattctctctgtgctatggtggaatggatgttggtggtggtactatggtacttggtgggatgcctgctcctcctgacatggttttctctcattcaaaccctgtccgcaggtattatacatttttgttttttccacaccagactgaagattcttttagtagcctgctggaggaaggttttctaatgttctgtatatttaatacatttccttattaattttggattgtcaacagcccgtattacaacattgagttaaaggaaatacatgttgccggaaaggcattgcggttagacccaaagatattcaacagcaaacatggcactgtcttagatagtggaaccacatatgcttacctgcctgaacaagcatttgttgcatttaaagatgctgtaagttatcaaatgatatctcctccacttttaccttttttgaattgcttttaccatctgctaactatgctactttactattttatatttaatatatttccctagatgccaattttgcaattaacctgtctagtttcagatgttaagacagaaaaatttactcctactttggcaacacctggttttgcatgtgtacgagccaatctgtttggcaccttttctgctatcttggttgtcgcattgcagattcttttcattttgtttttattcagctcttcattgtcattcctgaaaatggaaatctttaaaatggacactcctggaaaagtatgctggaataattatgtttttaatggataggtgacaaataaagtaaattctctgaagaaaatccgtggcccagatccaaattataaagacatctgctttgcaggtgctggaaggtaactcttgcaccatgataacaatttctaccccctttgttttcatcatcaatgttcttatcttatcactttaccttcaggaacgtctcccaattatcagaggtatttccagatgttgacatggtatttggaaatgggcagaagctttcgctttcacctgaaaactatttgttccgggtatgagaaattccaagcttagacctgttctgatgaattatgacaccccattacttttttgctttgcctgttgttgagttcatgttttgtcttctcttctttccggtttcaaaataaagcattcgaaggttgaaggggcttattgcttgggtgtgtttcagaatggaaaagatccgacaacactattagggggtaagatcttcaactcttggtctcttacgaggaacttcaagaaaatttccattggacttcttttatttatatcatctgactacactatctctactttattcgcatataacttgttactagtgtatgctgaataacatttgcacctgtactatgagtctttgaccagcttatacactcgcgtctgctggaaacttgagtagaaaaccaagtaactctctttgtagaaaatactactatataacaatggtctccttatctttttcagcataaccagctgatgcacttttcaatattttttagatataatctgaggtaacttttgtgtcagtgtagcttgttccttcatcactatggcaatttcttggctgcacttattcaatttcgtaatccaatagtttacgtgtgcaagtatgcaatgattggtgtgtaatccgaaaaccatggctgtgaaataccaacattgtttatcattttatgaatataagaatgcataaaccctctatttttttcatagataacaaacatgcaattatctgtgaacaatccaaaaacaagcatccttaagagttattcctgatttcagaaaatttgaggttagaagcaaagtgttcatggaattatcagttaaaactctaaaagtggttgagcctacaaaggaggcattctctttattaattgccggttgcaagccaacatacggtattgtaccaagaaattttttttctgccaacagtataatagaccttggctgcttgttgtatttatgcactcttttgtctctaaaaggaaagtatggtgtttttgttctcttctctatcccttaaagagtcaagcagatcaatctttagagagatttatacttttcttatattaattttgaccttttatttgatttatagacagtctacatgaatgttctaatagtttgcatggctctatgtactttgaaaccttgcccgctttgagtgtctaaagaataatgatcttactggcaggaattgttgtccgtaatactcttgtaacctatgaccgtcacaatgagaagattggcttttggaaaactaactgttcagagttgtgggagaggctccatattagtgaagttccttcatcagcaccttcagattcagagggagatatggcaccagctcctgctcctagtggtttgcctggtacagccctacctatacaactattttgttaaaactattgatttgctgcaactttagcttgtcattttagagaactgtggcaataaggtagaattttatcagaaagctgcaactttgactggcaagttgggcccacatgtcatatgcacatagggggataaagttgcagttttctaataaaattgtttgctattgttgcagttttgtgaaacactatgcttaagttgtagaaaagttatagtattgaccaaattattgcacttttctgaaatttactctctatctttcttcattttggtggtcatgttttatgaacgttgaatcacaagcatttgctatttttataatttcgaatggtcaactattatcatcttctttggggtactttctttggatgttatccagaagtttcattgggatcaaatttttctttgaaatgggtgcagacagcccaatctttccccattttttatctgcaccatttcatttttgtttacctaatttttttctcaaataattttgtttacctacttaattaaattacctagaaatcacctagttattttgttttggtagctcttgcctaataacttaaatcattatttttatttagtgcacactattatagatggccaaaaggcccgaggcccgacggcccggcccatggcacggcgtttaggcccggcccaagcacggcacggcccgtcaagggtcgggcccgtgccggcccggcccgaccaccgggccgtgcctgggcctctccgctggcacgttgggccggcacggcacaatgggccgcatgccaagcccgacacataaacaatagggagtaaaaatagacatattatatgccacggtcgaaagaatagggatgtaaaatagacttattttacctatatatatgtcagcccaaagaggagggacggaaaatagacttattttcactatatatatgtcacagcccaaagtggagggacggaaaatagacttattttcgatatattatgtcacagcccaaagaggagggacgaaaaatagacttatttaaaaaaaggcacgatgggctacctgcgccttcgggccggtccggcacagcccgacggttggtgggccgtgcctaggcgggaggcgcagcccatgggccgtgccggcccggcacgaagtgccgatcgggccgtgccggcccgatggctggtgggccgtgcctggctgtgcctgggccaggccgtgccgggcgggccttttggccatctatacacactatttctagctttattttatgcgctgatgaataaggtttttctcctgcttgcagaatttgatgttggcctaatcactgttgatatgtccataaatgttacttatccaaacctgaaacctcacctccatgagctggctgagcttatagctaaagagctggacattgactcccgtcaggtaagggtgacccatagtctgtgctgttgtggtttttctagttttgtttggaggtgatgcgtgagggacactatccttgctattgtttacagctttgcaccatcctatcttgatagcactagcattcttttgaagtgatttgttaaagttgcctcttgagtttgacaggttcgagttatgaatgttacaagccaaggaaactctactctaatcagatgggggatttttccagctggaccttctaattctatgactaatacaacagcaatggtagcatccactcttgcacatatgaggactactttaatctatctgttataaagataattgatttgctgcattgatgtatgattagggtatcatttatcggttgacccaacatcacgtccagttgcctgaaaatcttggcagttatcagttacttgaatggaatgtgcagcctttatccaagaggtaagcaaacaccattataactgccaagattatattgccattaaaagcttgtacagtccatattatcataataagctctgtctttatcattggaattcaactctttcttttcattgaagccctgctttcatcctgatctaaaatgacaaggcaacatcccttcgacatcctttttgcagggaaaaagtagatacatgtcactctacactagcctgtttagagatataccattataaactataaagttctctctcccaaacactattcttatactgatcagtggctttagcgtgtagttgtagtatgcaatggggctgcctggcaaacatggaaaacctgaatatctgtcaaagtgcttaagcaagattctcacatctattaggaaaaatcattttcaccaattcccttgaatatttcttgtgcggcatcgatgcatcaatcttggcattttcatctgctggagaacttacattcggtaattatttctacaggtcatggttccgagatcatgtagtctctatactgcttggaattttgctagttgttttgctgactttatcggcccttttagtactgattgtctggagaaagaaatttagaggtcaagcggcatatagacctgtggattcagcagttcctgagcaagagctccaaccgctataatttggagtggttcaacggagtaaacatataggcgattctttggtagaaataccgttgtgcgggctgccatgttgcagcgggttcacatccgctgctgggagttgccctttttctttgtatgtaacacaagctacaagcttacagaagaagcacaagattacataacttctcgattcagcacttagagcctctgttcataaactgtctagcgattcagatcaagagcttcctcttgtagcttacagtagaagaaggttttgttcgtgtaatgtagattaagtagaatagagcaaggcacaaaagcacagcagccatggacggaatgttgtattatctagtatctgataagtgctgaggatattcggcttct</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0592200, RefSeq:Os07g0592200