Os07g0596900

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Revision as of 08:44, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0596900| Description = Similar to SUSIBA2-like (WRKY transcription factor 80)| Version = NM_001066708.1 GI:115473148 GeneID:4343795| Length...")
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Gene Name

Os07g0596900

Description

Similar to SUSIBA2-like (WRKY transcription factor 80)

Version

NM_001066708.1 GI:115473148 GeneID:4343795

Length

3290 bp

Definition

Oryza sativa Japonica Group Os07g0596900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:24972251..24975540

Sequence Coding Region

24972364..24972586,24973704..24973826,24973937..24974658,24975221..24975451

Expression

GEO Profiles:Os07g0596900

Genome Context

<gbrowseImage1> name=NC_008400:24972251..24975540 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:24972251..24975540 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccgcgcggcgggtggcgggcggcggcggtggcagcctgtggggcccgcctcagccgccgccgtcgaccggagggggcatcccccagctccccgccgcggccgccgccccagtggagggcctcctcgacgcccccttctcttcctcctccggtggcggtggcggcggctggccgccgccgccgccgccgctctccggcaccgccgtcctcatcgggtacccccagggcaactttgaaactttccctcaacaggacttggtacctttaacagcacaagaggttcattctaagtgcattacattcggtcgagcagagaacctgccttttatccctttggcgacttcagcgctggtctcccaacatactggttcttcttctgtaaatgtgacaccgttgcaagaaattctgacttcgccgtcgcaaataagcaatgtcaacactgaatctattggggtgttacaagggctcccagcttcatccatcgttctggatagacctactgatgatggatacaactggcgaaagtatggtcagaaggcagtgaagggtggggaatatccaaagagctactacaaatgcacccatctgaactgtttggtcaggaaaaatgtggagcactctgcagatggacgaatcgttcagataatttacagaggacaacacactcatgaacggccctcaaaaaggaggtttaaagattgtggtggtatatcagatgatttagacgatttcagtggcaccacgggcacttcagtcagatcacagcctgattacgatgattactgcagaaagcctatcattccaagtggcaccatggttgctcctttagtgaaaaagattgaagatggtgatgaccaattgtctggatcaagtgataaccaggatgagcatgatgatgaggtgaggacttctgatggagcttccggtgatgccagtgcaaatgaaaggaatgtgccagccccaggtcaaaagattatagtgagtacaaccagtgagatcgatcttttggatgatggttataggtggcgaaaatatggacagaaagtggtgaaaggaaatccttacccaaggagttattacaaatgcacctacctaggctgtgatgtaaagaagcaagttgagagatctgttgaggaaccaaatgctgtgataactacatacgaggggaagcatatccatgatgtgcctgctgcaaggaacaaaagccatgtcgtagccaatgcctctctattgcagaacacaaagtcgaatacctactgcacagagcaatcctacacaacgatcacttgctag</cdnaseq>

Protein Sequence

<aaseq>MAAARRVAGGGGGSLWGPPQPPPSTGGGIPQLPAAAAAPVEGLL DAPFSSSSGGGGGGWPPPPPPLSGTAVLIGYPQGNFETFPQQDLVPLTAQEVHSKCIT FGRAENLPFIPLATSALVSQHTGSSSVNVTPLQEILTSPSQISNVNTESIGVLQGLPA SSIVLDRPTDDGYNWRKYGQKAVKGGEYPKSYYKCTHLNCLVRKNVEHSADGRIVQII YRGQHTHERPSKRRFKDCGGISDDLDDFSGTTGTSVRSQPDYDDYCRKPIIPSGTMVA PLVKKIEDGDDQLSGSSDNQDEHDDEVRTSDGASGDASANERNVPAPGQKIIVSTTSE IDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTYLGCDVKKQVERSVEEPNAVITTYEGK HIHDVPAARNKSHVVANASLLQNTKSNTYCTEQSYTTITC</aaseq>

Gene Sequence

<dnaseqindica>2955..3177#1715..1837#883..1604#90..320#ctcgatcgcctcgcctcgcgtccccgcgatttctcactcgccatcgccgacgacgagatcctcgccaccgcgccgcccccacccccctcatggcggccgcgcggcgggtggcgggcggcggcggtggcagcctgtggggcccgcctcagccgccgccgtcgaccggagggggcatcccccagctccccgccgcggccgccgccccagtggagggcctcctcgacgcccccttctcttcctcctccggtggcggtggcggcggctggccgccgccgccgccgccgctctccggcaccgccgtcctcatcgggtacccccaggtgtggacatctgctgctatcgccttcttgtcgttgctctggtcgtctctggaatgcagtggaggaggttctcccatgtctgttgccgaattggggcatgttggggcggaagccatttttgggtcgtttggtgttcgagcaaatgcggataggggggggggggggggggggatttggccatattatggtcccatctcgtgctaggatttcgctactgtgcgtactgtaaactatgtaccagttgattcgtgcgtgtcactttgcggctgggagagcatgcgcactgttgctcgcgggacgttttcctcctccgaatgatgatggctttggagtttagacctgcgaatgcgctgtatcctgcctgtgtccatggcgcccaatccggtcgggcatgcgcctttgtgttgcagactggtgcaggtgctgtgctgagtgttctttctttcccctatccgagtgttcttgggacaattgggttggtctgggatcaatgtggttcatggattcagctaacatcgcaccacatttcgctgataatggtacgcgtttgttttcggtacagggcaactttgaaactttccctcaacaggacttggtacctttaacagcacaagaggttcattctaagtgcattacattcggtcgagcagagaacctgccttttatccctttggcgacttcagcgctggtctcccaacatactggttcttcttctgtaaatgtgacaccgttgcaagaaattctgacttcgccgtcgcaaataagcaatgtcaacactgaatctattggggtgttacaagggctcccagcttcatccatcgttctggatagacctactgatgatggatacaactggcgaaagtatggtcagaaggcagtgaagggtggggaatatccaaagagctactacaaatgcacccatctgaactgtttggtcaggaaaaatgtggagcactctgcagatggacgaatcgttcagataatttacagaggacaacacactcatgaacggccctcaaaaaggaggtttaaagattgtggtggtatatcagatgatttagacgatttcagtggcaccacgggcacttcagtcagatcacagcctgattacgatgattactgcagaaagcctatcattccaagtggcaccatggttgctcctttagtgaaaaagattgaagatggtgatgaccaattgtctggatcaagtgataaccaggatgagcatgatgatgaggtgaggacttctgatggagcttccggtgatgccagtgcaaatgaaaggtatttactgcaaccaaacataaatttcctccgttttaaaggtttgtaaattcgccaaagttcctattttagcatgttttgacttattatcattattttctgttgggcaggaatgtgccagccccaggtcaaaagattatagtgagtacaaccagtgagatcgatcttttggatgatggttataggtggcgaaaatatggacagaaagtggtgaaaggaaatccttacccaaggtaatcctccagtcagttctccatttccttttggaacgatgcattagatcataacatccttgcaaataagtaaataactccacactaaccgtaggatcattgaaactttcaagctatttattaaacaatttgagatacaagaactgcctcaactacttattagtgaatgtcagcatcagtgcagtttggtatcatcaatttgttgttttctccacagttccacatagctcccatacacttgtgtagacatggacaattggatgcagcaatactcccaaaaataccatcttgccataatacaaaaaaaaaagaacacttcccctttccatttgacagcaaatatataccgaacaagcataaccagcgtgctagactgatattgcttcttactggcaccaaatatctacatataggagcgaatcagttttgatacagtttggcactgaatttaaaaccttgtttatatgaaaaatatttagttgatacaaaataatagtatccggcatgaatatctaagagaaggtttctggtctggtttgctataattagttttcacgtgactactgcacaaggagaatatcctgtgttagcaccatactactgatcctcaaaatgaacaaagttggtcatgtttccatgaaagtggttggaatttgtttctcaacatgtgggctgaatttaatttggagttgaatttcacaagacggtacatgttatgtcatataagactaaattgcgtctgaatatacatgtatatgtgagaatctttgtgaagttgttaacatgacaacacatgatttcccccatactacatagtacacacagttacccatgcaacaattttatttcttcggtaactctgaacgtgtaatggtgagggaacattgttgaaatcgttaggtgagtagttccttttgcaatagttactgctgccacgagattgcaagtaattttcatgcttctacattgttcattgatggtgtcctccttattattgttataaattttttcctgttatgcacaatttatttcaactgaaatttcatctgactttttcgagactttaaatcttttgagcattagtcctgtactcccgtacattgtctgcataatgcaggagttattacaaatgcacctacctaggctgtgatgtaaagaagcaagttgagagatctgttgaggaaccaaatgctgtgataactacatacgaggggaagcatatccatgatgtgcctgctgcaaggaacaaaagccatgtcgtagccaatgcctctctattgcagaacacaaagtcgaatacctactgcacagagcaatcctacacaacgatcacttgctagattctgccatacatccgtctgattgctcatatgtagcatttctgaagctgtgtattttatcggccgtacccactaacgaggcgatttttggcaccattgtgccatgtattttt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0596900, RefSeq:Os07g0596900