Os07g0597000

From RiceWiki
Revision as of 08:44, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0597000| Description = Similar to Eukaryotic translation initiation factor 5A (eIF-5A)| Version = NM_001066709.1 GI:115473150 GeneID:4343796...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os07g0597000

Description

Similar to Eukaryotic translation initiation factor 5A (eIF-5A)

Version

NM_001066709.1 GI:115473150 GeneID:4343796

Length

3262 bp

Definition

Oryza sativa Japonica Group Os07g0597000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:24977859..24981120

Sequence Coding Region

24978271..24978372,24979279..24979353,24979446..24979502,24979640..24979762,24980751..24980876

Expression

GEO Profiles:Os07g0597000

Genome Context

<gbrowseImage1> name=NC_008400:24977859..24981120 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:24977859..24981120 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcggactctgaggagcaccatttcgagtcgaaggccgacgctggggcgtccaagacctatccccagcaggccggaaccatccgcaagaatgggtatattgttatcaagaaccgcccctgcaaggtggtggaggtttctacctcgaagactggtaagcacggtcatgccaagtgtcactttgttgccatagatatattcaatggtaaaaagcttgaggatattgttccttcgtcccacaactgtgatgttccacatgtgaaccgcacagagtaccagctgattgacatatcagaggatggattcgtgagccttcttactgagagtggtaacactaaggatgatcttagactcccaactgatgacagtctcctgggtcagatcaagactggatttggtgaaggcaaggatcttgttgtgactgtcatgtccgccatgggggaggagcagatctgtgcgctgaaggacattggccccaagtaa</cdnaseq>

Protein Sequence

<aaseq>MSDSEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVV EVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTEYQLIDISEDGF VSLLTESGNTKDDLRLPTDDSLLGQIKTGFGEGKDLVVTVMSAMGEEQICALKDIGPK </aaseq>

Gene Sequence

<dnaseqindica>2749..2850#1768..1842#1619..1675#1359..1481#245..370#gcgagcttatcacttatcatcaatcggcgcctccctctctctcgctcaccgcctccttctcctcgcgatctatccaaacaaggtaatttggggtggaaatccattcggatttggttcgtagtccaattgcttccgtaccacacttgctcggtttcttggtttgggaatttcgtttttttgtgcaatcttgtttgatttgatgtttgggatttgattttgttatcaggggctcgctaagatcggcatgtcggactctgaggagcaccatttcgagtcgaaggccgacgctggggcgtccaagacctatccccagcaggccggaaccatccgcaagaatgggtatattgttatcaagaaccgcccctgcaaggtatctgcttagatctcgattcgattcggtggttagatgcaattcttgtaattacttctggttacttttagttgttatctgtgtaatatatggtgtaatatatggttgactggtgattgttgttgtgtatctagatgataaattattgctggtttggagtgcagggtagtgggaattatgtcgtttatatacgtaacgcaaatgtgaagcttgctcgtttgccgtaggttgaactaattatttgccttgtagaagggttgtccgtagaagagccagtgttttttttcccctcagtcaaacgtttttttagtttttggggatgatttcagcgttcgatccaagccaacaccgttgtgttgtactatgtttctagccttttttctgtaaacaaccttgctactccaaaatagttcagaatgcattcattatttctgtaactaagctggttgaaaaggtggaaattctttgctaattttagacaatgtttttctagggatttggcaaggtaagaaagattatcttgctgctctaaaatagttctctgcttagtttgtgtagcatgttttggacatgagatgatctcattttcggttgactgtaatagtgtaatgagagtgtgattggtacgttaagattcatatttgtaggtaacaatgctttgtacaaaaacaaagctgttctctggcaatacaataaaaaacacacacataacatttactttgtgttaagattcatattctgttgtgcaccatgtgagagttatcagttatcacataagttcacagttgtgctcagtttacttttatatctatctccttcgtttctttacatctttttggaaaaaaaaagtgtggcttttttcaatggtgtcagtaaaacagttcttatcttgaagtctgaagctatgtggtgtttatttgtgctcattaagtataactttcttttcctgatctggttgaaaatttgaaatgaataaaacatattacaggtggtggaggtttctacctcgaagactggtaagcacggtcatgccaagtgtcactttgttgccatagatatattcaatggtaaaaagcttgaggatattgttccttcgtcccacaactgtgatgtaagtatatttttttgtaagtagtttgtaactaagtcagcattttttttgtttgttgtaactaagtcagcatttgttgtaactaagtcaacatttttttgtttgttgtaactaagtcagcatttttttgtttccaggttccacatgtgaaccgcacagagtaccagctgattgacatatcagaggatggattcgtacgttccaaacttccaaataatgagccaaaatatttctcaatgtaaataaatcttaatctcgttacttattattatgttatttctttcaggtgagccttcttactgagagtggtaacactaaggatgatcttagactcccaactgatgacagtctcctgggtcaggtttgttagagaaatctttttacaactttgtttctatttgtatatgtggatgataatgctgcttccttattcatttattaggttatatgttgggtctgtatgaattattccatcatgtgtttgattagttctttctataccctctaggattgcaactggtgtagaaatttacgagcttagaccttcattttataacattattttttcttgcacagaacgtcaacattaagccatctttgtggtggttgtcttgtatatttcagtctattattgtcactgtttcctcctgttcttttgattttgatgttcatatgaatagcacaaactcgcagtacgtgcttctgaataattggcataaaaaactagagggaagccaactggttactttaactacattttgtatgttctgtattcttccatcagcgtgcctctcttttctttttggttgtgggatcattaacctggttattctgcatgggtattgtagtatatatattctgtacatagaacattagtagtatactaaaattccagttgatataagcttggtttatagtgggatggcatagggcttttctcaatccttttgcaccgaaggttgccctgcactaaaatttcagttgatatgcttggtttatagtggaatggactgtgtcaataggaagtggatgcatgaaaagtttgcttgattggaattcggaagtatcgattcggttctctttccacctatatcgtgctgtcatgtttacttttgcttcatcatttgtgcattcctgaaccagttaacttgccaaatatctgccttgagttgcgttgagttcttatgttcccaaatatctgtcttgagttgccttgagttcttttgttctgtgctactgccagatttaaatctttatggtttttcagatcaagactggatttggtgaaggcaaggatcttgttgtgactgtcatgtccgccatgggggaggagcagatctgtgcgctgaaggacattggccccaagtaactccctcaagtggaaggcagaacagaggggcaactccctcaagtggaaggcagaacagaggggtaactccctcaagtggaaggcagaacagagggatccttatgtatcaaacctaaactaaaaaacaaagacatgtattgagaaggaatgctacaaaagacatccacccagcttgaagccgcagtaacaagtgcagtgattgctgggtgtggcattatctgattaccgctaccccatcatgacatttgggatcctgtattttccatggttttatttgtgccctctgtttggtatcaataattgatttggaacggtggaaaccatatactgaagctgaagattatcattgggtcatttcgtgcctatggatttttctctgaaaatttccctagtcactgtttagtctgcaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0597000, RefSeq:Os07g0597000