Os07g0598400

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Revision as of 08:45, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0598400| Description = Glycoside hydrolase family 79, N-terminal protein| Version = NM_001066717.1 GI:115473166 GeneID:4343804| Length = 20...")
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Gene Name

Os07g0598400

Description

Glycoside hydrolase family 79, N-terminal protein

Version

NM_001066717.1 GI:115473166 GeneID:4343804

Length

2059 bp

Definition

Oryza sativa Japonica Group Os07g0598400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:25077540..25079598

Sequence Coding Region

25077689..25078823,25078915..25079098,25079175..25079211,25079322..25079555

Expression

GEO Profiles:Os07g0598400

Genome Context

<gbrowseImage1> name=NC_008400:25077540..25079598 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:25077540..25079598 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgtccttcccttgctcgccgccgccctcctcgtcctcttctccggcctgcatcccgccgcctccaccgccgccgccggcggcgaggcggccaccgtggttgtcaaggcggcggcggccgtctcccgcaccgacgacaacttcgtctgcgcgacgctcgactggtggcccagggacaagtgcaactacggcatgtgcccctggtacaacgcctccatcattaacctggatctgaacaacactattctgaacaatgctgtcaaagcgttcaactcgcttaggattaggctcggagggtctcttcaggaccaggtgacgtacaaagtcggcagcaactacggcgattgccggagcttccagcgagacgacggcggcctcttcggcttcaccgacggctgccttgaaatgaaccgatgggacgagctcaacgtcttcttcaaaagaaccaacacgacggtgacgttcgggctgaacgcgctcaagggccggaggaaggccgccggcggcaaggacacgctgtactccggcgactgggacgcccggaacgcgctcgacctgatgcggtacaccgccggcaagggctaccgcgtcgagtcgtgggagctcggcaacgagctgtccggcagcggcgtcgcggcgagggtggcggcggcgcagtacggccgcgacgtggcggtgctgaggaaggcggtggagcgtgtgtacggcggcggcggcgaggtgccgaaggtgctcgcgccgggcgggttctacgacggcgcgtggttctcggagatgctgcgggtgtcggggcgcggcgccgtcgacggcgtgacgcaccacatctacaacctcggctccggcaaggacagggacctggcgaggaagatgcaggacccggggtacctcgaccaggtggagaagacgttccgcgacatggcggccacggtgcggggctccgggccgtggagctcgccgtgggtgggcgagtccggcggcgcgtacaacagcggcgggaagggcgtgtcggacaggtacgtgaacggcttctggtacctcgaccagctcggcatgtcggcggcgcacggcaccagggtgtactgccgccaggcgctcgtcggcggcaactactgcctcctcaacaccaccaccttcgtccccaaccccgactactacggcgcgctgctctggcaccgcctcatgggcccggtggtcctcaaggcggcgaccaccgccggcggcggaggttcgccgtacctccggtcgtacgcgcactgctcgagggagaagccgggggtgacggtgctcctgatcaacctgtcgaacgcgacggcgttcgacgtgtcggtggccggcggcgcgctcggcgcggcgccgtgcggcgggcggagggaggagtaccacctgagcccgctcggcggcgacatccggagccaggtggtgctgctcaacggcgaggcgctggcgctcggcccgggcggcgagatccccgagctccggccggccgtcgtcggcgacgggtgcgcggcgccgctgcgcgtggcggcgcgcggcatcgcgttcgttaggttcacggaattcaaggctcccgcatgcgcggcctag</cdnaseq>

Protein Sequence

<aaseq>MAAVLPLLAAALLVLFSGLHPAASTAAAGGEAATVVVKAAAAVS RTDDNFVCATLDWWPRDKCNYGMCPWYNASIINLDLNNTILNNAVKAFNSLRIRLGGS LQDQVTYKVGSNYGDCRSFQRDDGGLFGFTDGCLEMNRWDELNVFFKRTNTTVTFGLN ALKGRRKAAGGKDTLYSGDWDARNALDLMRYTAGKGYRVESWELGNELSGSGVAARVA AAQYGRDVAVLRKAVERVYGGGGEVPKVLAPGGFYDGAWFSEMLRVSGRGAVDGVTHH IYNLGSGKDRDLARKMQDPGYLDQVEKTFRDMAATVRGSGPWSSPWVGESGGAYNSGG KGVSDRYVNGFWYLDQLGMSAAHGTRVYCRQALVGGNYCLLNTTTFVPNPDYYGALLW HRLMGPVVLKAATTAGGGGSPYLRSYAHCSREKPGVTVLLINLSNATAFDVSVAGGAL GAAPCGGRREEYHLSPLGGDIRSQVVLLNGEALALGPGGEIPELRPAVVGDGCAAPLR VAARGIAFVRFTEFKAPACAA</aaseq>

Gene Sequence

<dnaseqindica>776..1910#501..684#388..424#44..277#acaccatcactggacgagcagtaagtaaacactctgtggaacaatggccgccgtccttcccttgctcgccgccgccctcctcgtcctcttctccggcctgcatcccgccgcctccaccgccgccgccggcggcgaggcggccaccgtggttgtcaaggcggcggcggccgtctcccgcaccgacgacaacttcgtctgcgcgacgctcgactggtggcccagggacaagtgcaactacggcatgtgcccctggtacaacgcctccatcattaacctggtaattaccacccctgaaacttgattagccaaacttaatcaccttcatttcatatatggatcaatctacttctaactgacactgagcacgtcactcttcttccctcacaggatctgaacaacactattctgaacaatgctgtcaaaggtaaataatttgcagatcactgatctatcaaaaaaaattgtactgaaattaaccagagttttatgtgatgttgcagcgttcaactcgcttaggattaggctcggagggtctcttcaggaccaggtgacgtacaaagtcggcagcaactacggcgattgccggagcttccagcgagacgacggcggcctcttcggcttcaccgacggctgccttgaaatgaaccgatgggacgagctcaacgtcttcttcaaaagaaccaagtaattaaactgcaattatcggctaattaatcgccatttcgaggaggattaaatgactaattatctttgatttgatttgattgacgtgcagcacgacggtgacgttcgggctgaacgcgctcaagggccggaggaaggccgccggcggcaaggacacgctgtactccggcgactgggacgcccggaacgcgctcgacctgatgcggtacaccgccggcaagggctaccgcgtcgagtcgtgggagctcggcaacgagctgtccggcagcggcgtcgcggcgagggtggcggcggcgcagtacggccgcgacgtggcggtgctgaggaaggcggtggagcgtgtgtacggcggcggcggcgaggtgccgaaggtgctcgcgccgggcgggttctacgacggcgcgtggttctcggagatgctgcgggtgtcggggcgcggcgccgtcgacggcgtgacgcaccacatctacaacctcggctccggcaaggacagggacctggcgaggaagatgcaggacccggggtacctcgaccaggtggagaagacgttccgcgacatggcggccacggtgcggggctccgggccgtggagctcgccgtgggtgggcgagtccggcggcgcgtacaacagcggcgggaagggcgtgtcggacaggtacgtgaacggcttctggtacctcgaccagctcggcatgtcggcggcgcacggcaccagggtgtactgccgccaggcgctcgtcggcggcaactactgcctcctcaacaccaccaccttcgtccccaaccccgactactacggcgcgctgctctggcaccgcctcatgggcccggtggtcctcaaggcggcgaccaccgccggcggcggaggttcgccgtacctccggtcgtacgcgcactgctcgagggagaagccgggggtgacggtgctcctgatcaacctgtcgaacgcgacggcgttcgacgtgtcggtggccggcggcgcgctcggcgcggcgccgtgcggcgggcggagggaggagtaccacctgagcccgctcggcggcgacatccggagccaggtggtgctgctcaacggcgaggcgctggcgctcggcccgggcggcgagatccccgagctccggccggccgtcgtcggcgacgggtgcgcggcgccgctgcgcgtggcggcgcgcggcatcgcgttcgttaggttcacggaattcaaggctcccgcatgcgcggcctagccgcctaggcttaattagcacgtgctagtaatcgcgagttcgtagattatgcagacatgaacaacatttgcattgtatcatgagtttaatcgtttttgataactctgagaaatggagacgtggttatcagctttgcttctggtttgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0598400, RefSeq:Os07g0598400