BGIOSGA016637

From RiceWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA016637

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016637, complete gene.

LocusTag

OJ991113_30.2

Ensembl Transcript ID

BGIOSGA016637-TA

Ensembl Protein ID

BGIOSGA016637-PA

Length

6388

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22739637..22746024

Sequence Coding Region

22739637..22740590,22740663..22740782,22740865..22740918,22741150..22741262,22741482..22741694
,22741806..22741884,22742005..22742058,22742130..22742204,22742307..22742360
,22742529..22742668,22742749..22742875,22743525..22743623,22743868..22743923
,22744013..22744115,22744971..22745099,22745339..22745517,22745635..22745659
,22745742..22745857,22745934..22746024

Genome Context

<gbrowseImage1> name=IndicaChromosome04:22739637..22746024 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:22739637..22746024 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTACTCCCCGCCCCACGCCGCCGACTCGGACTCCGAGGGATCCCTCCTCTCCGACGTCTCCGCCTCCCCGCCACGCCGCCGCTCGCCTCCTCGCCCGGCGCCGCCTCCTCCTCCTCCTCCTCCTCCGCCCAAGCACCGTACTAGGCCCGCCGCCCCCACCAAACCCAAGCTCAAGCCCACGCCGCCCGCTGCCTCCGCGCCCGCGCCCGCCCCGCCGCCTCCGCCTACGCTCCGCGCCGCCGCGCTCTCCGATCCGCACGGCCTCGCCGCGCGCATCGCCGCCGGCTCTGCTCTCACCGCGGCCTCCGGCACTGCCTCGTCGTCCTCCTTCCGCCGTCTCGTCCAGTCGCGCAACCCTTCCTTCGATCCAGCCACCGCCTTCACGGCTCCCGCTTCGTCCGCCCCCTCCGAGGTTCCGAGCGCCGCTCCGCGGCCGCCCCCGACCGCCGCCACCGACGCGCCGCCGCAGACCAGGCCCAAGCGGGTGCACCCCAACTCCGTGTCGGAGGTAGCGGCCGCGTCGGCGGCGGCGGAGCAGCCGAAGCGGGCAAGAGGGGGATCCGAGGGCAACTTCGTGCGGCTGAACATCAACGGGTACGGCAGGAGGAGGACGTTCAAGAATTCGCAGGCCAAGCGCTCGACGAAATGTCGATCCTGGCGGCGGCAGCGCGCCGCCGGTGCAACACCCCGTTCTCAGGGCGACGAGGAAGGGGATCTCGTGGCGGAGGCCCTGCTGGAGCGGGAGAAGCAGGCAGCTAGCGATAGTGTTCTGGAGGCTGTCGAGAGTGTGAGGGAGGACCCATCGGAGCAAAATCTCAAGAGCTTGCTGAATGCAGCATATGGGCACGATTCGTTCCGCCAGGGGCAGCTTGAGGCGATCCAGCAAATTGTTGCAGGGGAGTCAACAATGCTTGTGCTGCCCACCGGTGCGGGCAAGTCGCTATGCTACCAGGTGCCTGCTATGATTTTGCCTGGACTGACACTGGTGGTGAGTCCACTGCTTTCCTTGATGGTTGATCAATTGAGGAAGCTCCCTGCATTTCTGCCAGGTGGCCTTCTTGCGAGCAGTCAGACATCGGATGAGTTTCATGATACACTACAAAGGCTGCGTGCAGGGGAAATAAAGGTGCTTTTTGTTTCCCCTGAGAGATTCTTGAACGAAGAATTCCTCCTGATATTTAGGGACACACTACCAATATCTCTTGTGGCGATTGATGAAGCTCATTGCATTTCTGAATGGTCTCATAATTTTAGACCTTCATATCTGAGACTCCGAGCGTCACTACTTAGGAGAAAGCTCAATGTTCAATGTATTCTTGCAATGACTGCAACTGCAACGACCCAAACCTTGGAGGAGATAATGAATGCCTTAGAAATACCATCTGATAATCTCATTCAAACATCTCAAATAAGAGAAAATCTACAGCTGTCTATCAGCACAAGTGATAACAGACTGAAAGATTTGATGTTATTATTGAAGTCTCCCCCTTTTGTTGACATGAGAAGTATTATCGTCTACTGCAAGTTTCAGGCAGAAACTGACTTCGTCTCTAAGTACTTGTGTGATAACAACATTACTGCCAAGAGCTACCATAGTGGACTTCTGATTAAGAACAGGAGCCGTGTACAGGAGCTATTTTGCTCTAACAAAATAAGAGTGGTTGTTGCAACTGTGGCATTTGGCATGGGTCTTGATAAGAGTGATGTCGAAGGGGTGATTCACTATAGCTTGCCAGAAAGCTTAGAAGAATACATCCAGGAAACTGGGCGTGCTGGAAGGGATGGACGGTTATCACACTGTCATCTACTTCTTGACTCAGCAACATTCTATAAGATCCGTAGTCTTTCACACAGTGATGGTGTTGATGGATATGCAATGAGCAAATTTCTTTACCAGATATTTTCCTCTGAGAACACAACTGGGTGCATTTGTTCATTGGCTAAAGAGTTGACCTCACGCAAGTTTGATATAAAAGAAGAGGTGCTTTTGACAATTCTCACACAGCTGGAAATTGGTGATCAACAATACATCCGTTTACTTCCTCAGTTCAGTGTTACCTGCACACTGTATTTTCACAAGACATCACCACAACTGCTTGCTGACAAGGATATACTAATTAGATCGGTTTTGAATAGATCAGAGATGAAGGATGGACATTATGTCTTTGACATACCAAGAATAGCTAATGATCTGAAGATCACTATGAATGAAGTATTTGATCACCTACATAAACTAAAGTTTTCAGGAGAAATATCATTTGAATTGAAAGATCCTGCTTACTGTTATGTGATCTTGTGGAGGCCAGATGACTTCAATGCTCTTTCAGCAAATCTCACAAAATGGCTTTCTGAAGTAGAAAGCTCAAAGATCAGTAAGTTAGATGCTATGTTTGCTCTTGCAAACTTTGCTGTCAAAGGGTGTAAAAGGACGGGAGGATGCTCTGGTTCCCAGCACACTCCGTGCATTCAGAAGAAGATTATGGAGTACTTCAGCAAGGACGATGGCACCTCAGAGAATGATTGCCGCACTCAGCTGCAGAAGAGCAGCCCATTCTTGCAAGCCGATATAAAGGTGTTCATTCAAAGCAACTCATTCGCAAAGTTCACCCCGAGGGCTGTTGCGAGGATTATGCACGGCATCTCGAGCCCTGCTTTTCCATCTGTCACTTGGTCCAAAAATCACTTCTGGGGACGTTATGTGGAGGTTGATTTTCCACTGGTCATGGAAGCAGCCAAAGCTGAACTGGTTAAACTTGTCGGAAAAGGGGAACAGTGCTAG</cdnaseq>

Protein Sequence

<aaseq>MYSPPHAADSDSEGSLLSDVSASPPRRRSPPRPAPPPPPPPPPPKHRTRPAAPTKPKLKPTPPAASAPAPAPPPPPTLRAAALSDPHGLAARIAAGSALTAASGTASSSSFRRLVQSRNPSFDPATAFTAPASSAPSEVPSAAPRPPPTAATDAPPQTRPKRVHPNSVSEVAAASAAAEQPKRARGGSEGNFVRLNINGYGRRRTFKNSQAKRSTKCRSWRRQRAAGATPRSQGDEEGDLVAEALLEREKQAASDSVLEAVESVREDPSEQNLKSLLNAAYGHDSFRQGQLEAIQQIVAGESTMLVLPTGAGKSLCYQVPAMILPGLTLVVSPLLSLMVDQLRKLPAFLPGGLLASSQTSDEFHDTLQRLRAGEIKVLFVSPERFLNEEFLLIFRDTLPISLVAIDEAHCISEWSHNFRPSYLRLRASLLRRKLNVQCILAMTATATTQTLEEIMNALEIPSDNLIQTSQIRENLQLSISTSDNRLKDLMLLLKSPPFVDMRSIIVYCKFQAETDFVSKYLCDNNITAKSYHSGLLIKNRSRVQELFCSNKIRVVVATVAFGMGLDKSDVEGVIHYSLPESLEEYIQETGRAGRDGRLSHCHLLLDSATFYKIRSLSHSDGVDGYAMSKFLYQIFSSENTTGCICSLAKELTSRKFDIKEEVLLTILTQLEIGDQQYIRLLPQFSVTCTLYFHKTSPQLLADKDILIRSVLNRSEMKDGHYVFDIPRIANDLKITMNEVFDHLHKLKFSGEISFELKDPAYCYVILWRPDDFNALSANLTKWLSEVESSKISKLDAMFALANFAVKGCKRTGGCSGSQHTPCIQKKIMEYFSKDDGTSENDCRTQLQKSSPFLQADIKVFIQSNSFAKFTPRAVARIMHGISSPAFPSVTWSKNHFWGRYVEVDFPLVMEAAKAELVKLVGKGEQC</aaseq>

Gene Sequence

<dnaseqindica>1..954#1027..1146#1229..1282#1514..1626#1846..2058#2170..2248#2369..2422#2494..2568#2671..2724#2893..3032#3113..3239#3889..3987#4232..4287#4377..4479#5335..5463#5703..5881#5999..6023#6106..6221#6298..6388#ATGTACTCCCCGCCCCACGCCGCCGACTCGGACTCCGAGGGATCCCTCCTCTCCGACGTCTCCGCCTCCCCGCCACGCCGCCGCTCGCCTCCTCGCCCGGCGCCGCCTCCTCCTCCTCCTCCTCCTCCGCCCAAGCACCGTACTAGGCCCGCCGCCCCCACCAAACCCAAGCTCAAGCCCACGCCGCCCGCTGCCTCCGCGCCCGCGCCCGCCCCGCCGCCTCCGCCTACGCTCCGCGCCGCCGCGCTCTCCGATCCGCACGGCCTCGCCGCGCGCATCGCCGCCGGCTCTGCTCTCACCGCGGCCTCCGGCACTGCCTCGTCGTCCTCCTTCCGCCGTCTCGTCCAGTCGCGCAACCCTTCCTTCGATCCAGCCACCGCCTTCACGGCTCCCGCTTCGTCCGCCCCCTCCGAGGTTCCGAGCGCCGCTCCGCGGCCGCCCCCGACCGCCGCCACCGACGCGCCGCCGCAGACCAGGCCCAAGCGGGTGCACCCCAACTCCGTGTCGGAGGTAGCGGCCGCGTCGGCGGCGGCGGAGCAGCCGAAGCGGGCAAGAGGGGGATCCGAGGGCAACTTCGTGCGGCTGAACATCAACGGGTACGGCAGGAGGAGGACGTTCAAGAATTCGCAGGCCAAGCGCTCGACGAAATGTCGATCCTGGCGGCGGCAGCGCGCCGCCGGTGCAACACCCCGTTCTCAGGGCGACGAGGAAGGGGATCTCGTGGCGGAGGCCCTGCTGGAGCGGGAGAAGCAGGCAGCTAGCGATAGTGTTCTGGAGGCTGTCGAGAGTGTGAGGGAGGACCCATCGGAGCAAAATCTCAAGAGCTTGCTGAATGCAGCATATGGGCACGATTCGTTCCGCCAGGGGCAGCTTGAGGCGATCCAGCAAATTGTTGCAGGGGAGTCAACAATGCTTGTGCTGCCCACCGGTGCGGGCAAGTCGCTATGCTACCAGGTATGCTTCAAAATTTGAGCTATTAAGTTTATATTGGTCGGTGCTGAAAAGTTGATGATGCTATTTTCTCAGGTGCCTGCTATGATTTTGCCTGGACTGACACTGGTGGTGAGTCCACTGCTTTCCTTGATGGTTGATCAATTGAGGAAGCTCCCTGCATTTCTGCCAGGTGGCCTTCTTGCGAGCAGTCAGGTAAAGGCAAAATGTTTGCAGTTGCTGCTAGTTCCATCCATTCTTGTTTTGACTATTGTGTAACATTACCTCATTTATCCAGACATCGGATGAGTTTCATGATACACTACAAAGGCTGCGTGCAGGGGAAATAAAGGTACAATTTTCTTAATGTCGACATCTGATCAGTTTAAGCATTCTCCAGTGACTACAGCCTTGATGCTGCCTTATCTAGAGAACATTTCCTTACTATCTTTATCAATTCTTCCAGTGCAGCATTTTTCTTGGAGTAACTAGAACATGAATCATTAAGAAGCACAAATGTATTTTTTTTTTGCACTTCAATGTTTTGCTAGGTTATGCTGAGATTCTTTATTTTTGGGATCAGGTGCTTTTTGTTTCCCCTGAGAGATTCTTGAACGAAGAATTCCTCCTGATATTTAGGGACACACTACCAATATCTCTTGTGGCGATTGATGAAGCTCATTGCATTTCTGAATGGTGAGCTGACATTGTTCTTAGTTCAGTTGAGAAGACATGATACTTCTTTACAGTTGGTACTGTGTTATTACTTTTGTGTTCACATCATTTTTGTGATACATCTTATTAATTTTACCGTTGTTTTGTTTTCCTAGTTTATTATTCACTTGTTGTGTAGTGTTAGACAGTTAGTACAACTGTCTTGCTAAGTTTATAACTTATTCCTGACTGAATGTACAGGTCTCATAATTTTAGACCTTCATATCTGAGACTCCGAGCGTCACTACTTAGGAGAAAGCTCAATGTTCAATGTATTCTTGCAATGACTGCAACTGCAACGACCCAAACCTTGGAGGAGATAATGAATGCCTTAGAAATACCATCTGATAATCTCATTCAAACATCTCAAATAAGAGAAAATCTACAGCTGTCTATCAGCACAAGTGATAACAGGTAGGCCACTTCTCTTTGCACCCATGAATGCAACCAGAGTCAGTTTAATACGTATTTACATGTGAAAGAAGGTATGCTATCTGGTTTTCAAGAGCATTTGCACGTATGCAGACTGAAAGATTTGATGTTATTATTGAAGTCTCCCCCTTTTGTTGACATGAGAAGTATTATCGTCTACTGCAAGTTTCAGGTATGTTTTTTTTTTTAAAAAAAATCCTAAAGATGTTCCAAAGACCACGCATCTGTCTATATACCCTAAATGTGTATGCACTATATGAAGATTTGACCCCTTTTTAATTATTGCGAACAGGCAGAAACTGACTTCGTCTCTAAGTACTTGTGTGATAACAACATTACTGCCAAGGTTGACATTAATCTTTAGCTTGATATTAATTTGCTGCGCCAACTTTAATTACATATTCTATTGTTTTATAGAGCTACCATAGTGGACTTCTGATTAAGAACAGGAGCCGTGTACAGGAGCTATTTTGCTCTAACAAAATAAGAGTGGTATGTGGTTTCTTCTTTAGTTCTTTGGCATGACCTTTTCTCGTCAAATGCATTATGTAAGACGTGGTGTCTAACATTTGTTTTCTCCATCCTTGAGCAAAGGTTGTTGCAACTGTGGCATTTGGCATGGGTCTTGATAAGAGTGATGTCGAAGGGGTATGGATATACATACATTATGATGCTCAAACTGTATGATAGAATTGCATTTGCTCCTTGTTTTTAAGTGAACTTCATTTCTACACTATCTCAAATTTTGTGTATCTCATAACGTTAAGCATAACTAAATTATGTTAATGGTCTGACTCGAGCATTCCACCCTTAAAGGTGATTCACTATAGCTTGCCAGAAAGCTTAGAAGAATACATCCAGGAAACTGGGCGTGCTGGAAGGGATGGACGGTTATCACACTGTCATCTACTTCTTGACTCAGCAACATTCTATAAGATCCGTAGTCTTTCACACAGGTGAATCTTTTTTTCCTAATCAACATGCTCTGCCTGCCACAGTTTTCCTATAATTTCACCGAGCAACCTTTTCTTGGCAGTGATGGTGTTGATGGATATGCAATGAGCAAATTTCTTTACCAGATATTTTCCTCTGAGAACACAACTGGGTGCATTTGTTCATTGGCTAAAGAGTTGACCTCACGCAAGTTTGATATAAAAGAAGAGGTTTGCACCTTCGGACCTTCCTCTTCAGGCCAGCATGCACCTAGTTTCTTATGTCATGCACTCATCCTACTACCTACATAGGCCTAGTTTGCTCGCACTATGTTATACTGAACGGGTCAAATGGATATCAATTTTTGGGGCACGTGTGTTTGATGGCTATTTGCTGTGCTCTGTAAGAATTTGCAATGTCACTAAATTTTATTTCTTAGCTTAAATGATGTCTTAGTGGATGAGCTGTCTAGCATTCAATTGTTCAGAACATCATAGAGAAAATTATCGGTATGATGCCCCAAGAAGATTCCAGTGTTTAGTTTACGGAAGTTGTTTCCACATTCTATTAATCTCTTAATGTTACTCTTCCAGTCAAAACCACATTGCCATTCCATGCAATTGGAATCAGCTATAATGCATTTAGGTTCCAGGAATACTACAAGGAATAGCATTTATAGACTTTTTCTCTGAAGCCGTTAGACAGTTTCTTCCCCTAATATTTTACATGGAATCCACCTTTCCCACCAATATCTTCATGCACTTCTTTATAATACTCTTATCCTAAAGCCTTTTAGTTCCTGAATGACCGAAAATATTAAATGGTCCAGCAAATTTTTAGATTCAATGATCTTATCTTCTTATTTTTCTAACAATGCAGGTGCTTTTGACAATTCTCACACAGCTGGAAATTGGTGATCAACAATACATCCGTTTACTTCCTCAGTTCAGTGTTACCTGCACACTGTATTTTCACAAGGTATGCCACAGGCTTCTCCAGTGATCTGGACCTTTTTTGATTTGCGTGTCAAGATGCTCAGTTGACGATCTTCTTGTCTGTCATGTAACAATGAGTGATCTTAATTGTTCACCGCCTAGACACTTAATTAACATGGCTTGCCTTTACTTAAAAAAAATTCATGGATTTACCATGTTCATTGTTATTTTGTCAAGCAATATTCATTTTTCTTTCATATCTTGATCATTGGATTAAATTGATGCAGACATCACCACAACTGCTTGCTGACAAGGATATACTAATTAGATCGGTTTTGAATAGGTAACACACTATCAACTTTTGTTCCAAAATTTTTTCTGAATGTGCTACACATTTCTAAGATGTCGATTCTGAATTCGTGGAGAAAGCAGATCAGAGATGAAGGATGGACATTATGTCTTTGACATACCAAGAATAGCTAATGATCTGAAGATCACTATGAATGAAGTATTTGATCACCTACATAAACTAAAGGTTTGCCCTTCTCTTCTAAATTAGCTAGAATGTTAAACATATTTGTTTGGGCTGCATCATCTGTTGCAACTTTTTTGAAAGAAAGGATAGGAGCTCTGCCTAGTGTATGAACTGAGTAGAAACTCATTCTTGCTAGTTGCTTGGAGTCATGCTATTTTAACCTTTAGTTTAGCCTATCATTATCTACTTATTTACTTCATGTTGCTTACATATGTTCTGGCAAACTCTACCATTATCGGTCTTGCGCTAATGGTTATCTTAGAATGGTTATTGCTGTTATTATCCAGATTCCAGAAGATATGATCACGTAGTATAGGCTTATAGTCTGGTTGTGGTGACTGTTGAACCACTGCCCGTTTTTCTTTTCTATGATCATCTATATTCCTTTTAAAAGACTCTAGTGATGCCACCACCGCTGATGTATGGGGCTATCAGGCTATGAGACCAGTATACACATGATTGCTATGCTCACTGTATATTTGTTGTTTCTAATGGTTTGCTTCTTTTTCACCTTGATTAAAGTGAAAAACTCACAAACATGTTAGTTTTATTTGTAGTTTTAAATTGGTCACACTGCACGATTTATTATTAATACGTGTTTTATTGTCACGTGAAAATGCATTTAAGGGTTTATGTCTCACTTTGGAAAACTACAATCCTATAAGCATGTCCCTTTTCTTTTTGTTTCATAAAGATGAAGCATTTTGTTTCAACCAAACAGAAACAATTTTTTTTTCAGAAAATGGACTCAATTTTTTTATTTCTATAATCCGCTGCAACGCACAGGTATTTAGCAAGTATTGCAAATATGTATATGTTGAAGCCTTAAACTTTCTTTGTTCCTCTGTTATTTAGTTTTCAGGAGAAATATCATTTGAATTGAAAGATCCTGCTTACTGTTATGTGATCTTGTGGAGGCCAGATGACTTCAATGCTCTTTCAGCAAATCTCACAAAATGGCTTTCTGAAGTAGAAAGCTCAAAGGTGCTTCTTAAATTGCCTCTCTTGAATATTCATTTTGCTTCATATTGTAAATTGCCAATCTTTACTACATAAGTTCTGTTTTCTTTTGTAAGGATTTAAGTTGTGGTACTAATACAAGTTTGGTCTTATGACTACTAAAAAAGGGTCTTATTTATTTTGAGCAAGAAAGCGGATTCAATGAAATTAGAGTAAAAATAGAAGTTAGATATACTGATTCATGGAATCTGCTGTTCAAACAGATCAGTAAGTTAGATGCTATGTTTGCTCTTGCAAACTTTGCTGTCAAAGGGTGTAAAAGGACGGGAGGATGCTCTGGTTCCCAGCACACTCCGTGCATTCAGAAGAAGATTATGGAGTACTTCAGCAAGGACGATGGCACCTCAGAGAATGATTGCCGCACTCAGCTGCAGAAGAGCAGGTTTCTGTACTCTTTTTCTAGATCGAACTTAACAGAGCATTACTTGCCATTTGTTTCTTGTGATGTTCCAATCTAAAATTTATCCGACTGAAGCATTTCATCTTACTTTTTTTGCAGCCCATTCTTGCAAGCCGATATAAAGGTAAGCACTGATGATGTGATACATTTCCCTTGTGATTCTGTATAATGCAATAATTCCAATTGTATCTCCACCATACTTCTAGGTGTTCATTCAAAGCAACTCATTCGCAAAGTTCACCCCGAGGGCTGTTGCGAGGATTATGCACGGCATCTCGAGCCCTGCTTTTCCATCTGTCACTTGGTCCAAAAATCACTTCTGGTCTGCCTCTCTGGCTGCCTTTTCTCATTATTTTCCTCTGTCACCTATTTACCTGAACCTGAATCTTTGCTGACAGGGGACGTTATGTGGAGGTTGATTTTCCACTGGTCATGGAAGCAGCCAAAGCTGAACTGGTTAAACTTGTCGGAAAAGGGGAACAGTGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016637