Biological Wikis - Revision history

Zhang Zhang at 08:05, 15 July 2013

2013-07-15T08:05:33Z

Zhang Zhang at 07:37, 15 July 2013

2013-07-15T07:37:19Z

Zhang Zhang at 07:34, 15 July 2013

2013-07-15T07:34:59Z

Zhang Zhang at 07:27, 15 July 2013

2013-07-15T07:27:03Z

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Zhang Zhang at 07:54, 14 July 2013

2013-07-14T07:54:33Z

Zhang Zhang: Created page with "Build biological wikis for community curation of immense knowledge. ====In service==== * [http://ricewiki.big.ac.cn '''RiceWiki''']: a community-curated resource of rice know..."

2013-07-14T07:53:06Z

Created page with "Build biological wikis for community curation of immense knowledge. ====In service==== * [http://ricewiki.big.ac.cn '''RiceWiki''']: a community-curated resource of rice know..."

New page

Build biological wikis for community curation of immense knowledge.
====In service====
* [http://ricewiki.big.ac.cn '''RiceWiki''']: a community-curated resource of rice knowledge.
* [http://www.wikicell.org '''WikiCell''']: a portal for a unified view of the human transcriptome.
* [http://esnd.big.ac.cn '''ESND''']: a wiki-based English-to-Chinese Scientific Nomenclature Dictionary.

====Under construction====
* '''FishWiki''': a wiki-based community resource for carp.
* '''PigWiki''': a wiki-based community resource for pig.
* '''DateWiki''': a wiki-based community resource for date palm.
* '''VirusWiki''': a wiki-based community resource for virus.
* '''iBio''': my biology + my biography, a personal biographical wiki for researchers, archiving personal scientific collections.

@@ Line 6: / Line 6: @@
 ! scope="col"| MediaWiki-based
 ! scope="col"| Reference
 |-
 |959 Nematode Genomes
@@ Line 12: / Line 13: @@
 |align="center"|Yes
 |align="center"|[1]
 |-
 |ArrayWiki
@@ Line 18: / Line 20: @@
 |align="center"|Yes
 |align="center"|[2]
 |-
 |BOWiki
@@ Line 24: / Line 27: @@
 |align="center"|No
 |align="center"|[3]
 |-
 |EcoliWiki
@@ Line 30: / Line 34: @@
 |align="center"|Yes
 |align="center"|[4]
 |-
 |ESND
@@ Line 36: / Line 41: @@
 |align="center"|Yes
 |align="center"|[5]
 |-
 |Gene Wiki
@@ Line 42: / Line 48: @@
 |align="center"|Yes
 |align="center"|[6]
 |-
 |GONUTS
@@ Line 48: / Line 55: @@
 |align="center"|Yes
 |align="center"|[7]
 |-
 |MetaBase
@@ Line 54: / Line 62: @@
 |align="center"|Yes
 |align="center"|[8]
 |-
 |PDBWiki
@@ Line 60: / Line 69: @@
 |align="center"|Yes
 |align="center"|[9]
 |-
 |Proteopedia
@@ Line 66: / Line 76: @@
 |align="center"|Yes
 |align="center"|[10]
 |-
 |Rfam
@@ Line 72: / Line 83: @@
 |align="center"|Yes
 |align="center"|[11]
 |-
 |RiceWiki
@@ Line 77: / Line 89: @@
 |http://ricewiki.big.ac.cn
 |align="center"|Yes
-|align="center"|Unpublished
+|align="center"|Submitted
 |-
 |SEQanswers Wiki
@@ Line 84: / Line 97: @@
 |align="center"|Yes
 |align="center"|[12]
 |-
 |SNPedia
@@ Line 90: / Line 104: @@
 |align="center"|Yes
 |align="center"|[13]
 |-
 |SubtiWiki
@@ Line 96: / Line 111: @@
 |align="center"|Yes
 |align="center"|[14]
 |-
 |Transdab Wiki
@@ Line 102: / Line 118: @@
 |align="center"|Yes
 |align="center"|[15]
 |-
 |WikiCell
@@ Line 108: / Line 125: @@
 |align="center"|Yes
 |align="center"|[16]
 |-
 |WikiGenes
@@ Line 114: / Line 132: @@
 |align="center"|No
 |align="center"|[17]
 |-
 |WikiPathways
@@ Line 120: / Line 139: @@
 |align="center"|Yes
 |align="center"|[18]
 |-
 |WikiProteins
@@ Line 126: / Line 146: @@
 |align="center"|(Not available)
 |align="center"|[19]
 |}

@@ Line 1: / Line 1: @@
-{| class="wikitable"
+{| class="wikitable sortable"
 |-
 ! scope="col" align="left"| Name

@@ Line 8: / Line 8: @@
 |-
 |959 Nematode Genomes
-|A semantic wiki for coordinating sequencing projects;
+|A semantic wiki for coordinating sequencing projects
 |http://www.nematodegenomes.org
 |align="center"|Yes
@@ Line 14: / Line 14: @@
 |-
 |ArrayWiki
-|A community-maintained system for sharing public microarray data repositories and meta-analyses;
+|A community-maintained system for sharing public microarray data repositories and meta-analyses
 |http://arraywiki.bme.gatech.edu
 |align="center"|Yes
@@ Line 20: / Line 20: @@
 |-
 |BOWiki
-|An ontology-based wiki for annotation of data and integration of knowledge;
+|An ontology-based wiki for annotation of data and integration of knowledge
 |http://www.bowiki.net
 |align="center"|No
@@ Line 26: / Line 26: @@
 |-
 |EcoliWiki
-|A wiki-based community resource for Escherichia coli;
+|A wiki-based community resource for Escherichia coli
 |http://ecoliwiki.net
 |align="center"|Yes
@@ Line 32: / Line 32: @@
 |-
 |ESND
-|A wiki-based English-to-Chinese scientific nomenclature dictionary;
+|A wiki-based English-to-Chinese scientific nomenclature dictionary
 |http://esnd.big.ac.cn
 |align="center"|Yes
@@ Line 38: / Line 38: @@
 |-
 |Gene Wiki
-|A wiki harnessing community intelligence to the annotation of human gene and protein function;
+|A wiki harnessing community intelligence to the annotation of human gene and protein function
 |http://en.wikipedia.org/wiki/Portal:Gene_Wiki
 |align="center"|Yes
@@ Line 44: / Line 44: @@
 |-
 |GONUTS
-|A community-based browser and usage guide for Gene Ontology (GO) terms and a community system for general GO annotation of proteins;
+|A community-based browser and usage guide for Gene Ontology (GO) terms and a community system for general GO annotation of proteins
 |http://gowiki.tamu.edu
 |align="center"|Yes
@@ Line 50: / Line 50: @@
 |-
 |MetaBase
-|A community-curated database of commonly used biological databases;
+|A community-curated database of commonly used biological databases
 |http://www.metadatabase.org
 |align="center"|Yes
@@ Line 56: / Line 56: @@
 |-
 |PDBWiki
-|A community annotated knowledge base of biological molecular structures;
+|A community annotated knowledge base of biological molecular structures
 |http://www.pdbwiki.org
 |align="center"|Yes
@@ Line 62: / Line 62: @@
 |-
 |Proteopedia
-|A scientific wiki bridging the rift between three-dimensional structure and function of biomacromolecules;
+|A scientific wiki bridging the rift between three-dimensional structure and function of biomacromolecules
 |http://www.proteopedia.org
 |align="center"|Yes
@@ Line 68: / Line 68: @@
 |-
 |Rfam
-|A community-derived annotation of RNA families;
+|A community-derived annotation of RNA families
 |http://rfam.sanger.ac.uk
 |align="center"|Yes
@@ Line 74: / Line 74: @@
 |-
 |RiceWiki
-|A wiki-based, publicly editable and open-content platform for community annotation of rice genes;
+|A wiki-based, publicly editable and open-content platform for community annotation of rice genes
 |http://ricewiki.big.ac.cn
 |align="center"|Yes
@@ Line 80: / Line 80: @@
 |-
 |SEQanswers Wiki
-|A wiki database of tools for high-throughput sequencing analysis;
+|A wiki database of tools for high-throughput sequencing analysis
 |http://wiki.SEQanswers.com
 |align="center"|Yes
@@ Line 86: / Line 86: @@
 |-
 |SNPedia
-|A wiki supporting personal genome annotation, interpretation and analysis;
+|A wiki supporting personal genome annotation, interpretation and analysis
 |http://www.snpedia.com
 |align="center"|Yes
@@ Line 92: / Line 92: @@
 |-
 |SubtiWiki
-|A comprehensive community resource for the model organism Bacillus subtilis;
+|A comprehensive community resource for the model organism Bacillus subtilis
 |http://subtiwiki.uni-goettingen.de/wiki/index.php/Main_Page
 |align="center"|Yes
@@ Line 98: / Line 98: @@
 |-
 |Transdab Wiki
-|A wiki database of transglutaminase substrate proteins;
+|A wiki database of transglutaminase substrate proteins
 |http://genomics.dote.hu/wiki
 |align="center"|Yes
@@ Line 104: / Line 104: @@
 |-
 |WikiCell
-|A unified resource platform for human transcriptomics research;
+|A unified resource platform for human transcriptomics research
 |http://www.wikicell.org
 |align="center"|Yes
@@ Line 110: / Line 110: @@
 |-
 |WikiGenes
-|A collaborative knowledge resource for the life sciences;
+|A collaborative knowledge resource for the life sciences
 |http://www.wikigenes.org
 |align="center"|No
@@ Line 116: / Line 116: @@
 |-
 |WikiPathways
-|An open, public platform dedicated to the curation of biological pathways;
+|An open, public platform dedicated to the curation of biological pathways
 |http://www.wikipathways.org
 |align="center"|Yes
@@ Line 122: / Line 122: @@
 |-
 |WikiProteins
-|A wiki-based system for community annotation of proteins;
+|A wiki-based system for community annotation of proteins
 |http://www.wikiprofessional.org
 |align="center"|(Not available)

@@ Line 1: / Line 1: @@
-Build biological wikis for community curation of immense knowledge.
+Biological wikis (bio-wiki) for community curation of immense knowledge.
 ====In service====
 * [http://ricewiki.big.ac.cn '''RiceWiki''']:  a community-curated resource of rice knowledge.